DK956108 |
Clone id |
TST39A01NGRL0024_O02 |
Library |
TST39 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_O02. 5' end sequence. |
Accession |
DK956108 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL525Contig1 |
Sequence |
GTCCCCCACACAGGAGATTAGCTCTAACGAATTTTGATTCTACAGAGATGGGAGTGGAGA AGACGGTGCTTCAAGCTGGAACTGGTCCTAGGCCTTCCGTCGGTCAAACCGTCACCGTCC ATTGCACAGGCTATGGAAAGAATGGAGATCTATCTCAGAAGTTTTGGAGCACAAAGGATC CAGGTCAACAAGTGTTCAGGTTTCAAGTTGGACAAGGAAGAGTGATTAAAGGTTGGGATG AAGGAGTTTTAGGCATGCAAGTTGGAGAGGTAGCACGTCTTAAGTGCTCGCCAGATTATG CATACGGAGCAGGAGGTTTTCCTTCGTGGGGGATTCAACCTAATTCTGAGCTTGTGTTTG AGATTGAAGTCTTAAGCGTCTCTTAAGTATATTAAAAGACTGGTGTGTAAGTAGAATGTG CTTGGCTGGATGTGAGCACTTCTATTAAATTAAAACCAATGGTAGTTTTTCCTGCTGGAA TTCGGCTTTTACATCCTTGATGGCCAGAATTGGGAGTAATCAAGAGATACGTCCAAGAAG CAAAATGCTGAGAAAGCTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04287 |
Definition |
sp|O04287|FKB12_VICFA Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba |
Align length |
109 |
Score (bit) |
178.0 |
E-value |
2.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956108|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_O02, 5' (561 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O04287|FKB12_VICFA Peptidyl-prolyl isomerase FKBP12 OS=Vicia ... 178 2e-44 sp|Q8LGG0|FKB12_ARATH Peptidyl-prolyl isomerase FKBP12 OS=Arabid... 169 7e-42 sp|Q4HZB8|FKBP_GIBZE FK506-binding protein 1 OS=Gibberella zeae ... 88 3e-17 sp|Q6KBA8|FKB1A_EMENI FK506-binding protein 1A OS=Emericella nid... 84 6e-16 sp|Q2U316|FKBP_ASPOR FK506-binding protein 1 OS=Aspergillus oryz... 80 5e-15 sp|P0C1J3|FKBP1_RHIOR FK506-binding protein 1 OS=Rhizopus oryzae... 80 7e-15 sp|O42993|FKBP_SCHPO FK506-binding protein OS=Schizosaccharomyce... 79 1e-14 sp|Q554J3|FKBP1_DICDI FK506-binding protein 1 OS=Dictyostelium d... 78 3e-14 sp|O42123|FKB1A_XENLA Peptidyl-prolyl cis-trans isomerase FKBP1A... 77 6e-14 sp|P48375|FKB12_DROME 12 kDa FK506-binding protein OS=Drosophila... 76 1e-13 sp|O94746|FKBP_CRYNV FK506-binding protein 1 OS=Cryptococcus neo... 75 2e-13 sp|Q5KMG3|FKBP_CRYNE FK506-binding protein 1 OS=Cryptococcus neo... 75 3e-13 sp|P18203|FKB1A_BOVIN Peptidyl-prolyl cis-trans isomerase FKBP1A... 74 6e-13 sp|Q6M981|FKB1B_NEUCR Peptidyl-prolyl cis-trans isomerase fkr-3 ... 73 8e-13 sp|Q62658|FKB1A_RAT Peptidyl-prolyl cis-trans isomerase FKBP1A O... 72 2e-12 sp|P62943|FKB1A_RABIT Peptidyl-prolyl cis-trans isomerase FKBP1A... 72 2e-12 sp|P62942|FKB1A_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP1A... 72 2e-12 sp|P68106|FKB1B_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP1B... 71 3e-12 sp|P68107|FKB1B_BOVIN Peptidyl-prolyl cis-trans isomerase FKBP1B... 71 3e-12 sp|Q6CF41|FKBP_YARLI FK506-binding protein 1 OS=Yarrowia lipolyt... 70 7e-12 sp|Q9Z2I2|FKB1B_MOUSE Peptidyl-prolyl cis-trans isomerase FKBP1B... 70 7e-12 sp|Q4WLV6|FKB1A_ASPFU FK506-binding protein 1A OS=Aspergillus fu... 70 7e-12 sp|Q8HYX6|FKB1B_RABIT Peptidyl-prolyl cis-trans isomerase FKBP1B... 70 9e-12 sp|P30416|FKBP4_MOUSE FK506-binding protein 4 OS=Mus musculus GN... 69 1e-11 sp|Q6FMA3|FKBP_CANGA FK506-binding protein 1 OS=Candida glabrata... 69 2e-11 sp|P27124|FKBP4_RABIT FK506-binding protein 4 OS=Oryctolagus cun... 69 2e-11 sp|P97534|FKB1B_RAT Peptidyl-prolyl cis-trans isomerase FKBP1B O... 69 2e-11 sp|P26883|FKB1A_MOUSE Peptidyl-prolyl cis-trans isomerase FKBP1A... 68 3e-11 sp|P20081|FKBP_YEAST FK506-binding protein 1 OS=Saccharomyces ce... 68 4e-11 sp|Q02790|FKBP4_HUMAN FK506-binding protein 4 OS=Homo sapiens GN... 68 4e-11
>sp|O04287|FKB12_VICFA Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1 Length = 112
Score = 178 bits (451), Expect = 2e-44 Identities = 83/109 (76%), Positives = 89/109 (81%) Frame = +3
Query: 48 MGVEKTVLQAGTGPRPSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXXI 227 MGVEK +++AGTGP PS GQ VTVHCTGYGKNGDLSQKFWSTKDP I Sbjct: 1 MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60
Query: 228 KGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVL 374 KGWDEGVLGMQ+GEVARL+CSPDYAYGAGGFP+WGIQPNS L FEIEVL Sbjct: 61 KGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVL 109
>sp|Q8LGG0|FKB12_ARATH Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2 Length = 112
Score = 169 bits (429), Expect = 7e-42 Identities = 79/111 (71%), Positives = 89/111 (80%) Frame = +3
Query: 48 MGVEKTVLQAGTGPRPSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXXI 227 MGVEK V++ G GP+P+ GQTVTVHCTG+GK+GDLSQKFWSTKD I Sbjct: 1 MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60
Query: 228 KGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSV 380 KGWDEGV+GMQ+GEVARL+CS DYAYGAGGFP+WGIQPNS L FEIEVLSV Sbjct: 61 KGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSV 111
>sp|Q4HZB8|FKBP_GIBZE FK506-binding protein 1 OS=Gibberella zeae GN=FPR1 PE=3 SV=2 Length = 111
Score = 87.8 bits (216), Expect = 3e-17 Identities = 47/111 (42%), Positives = 62/111 (55%) Frame = +3
Query: 48 MGVEKTVLQAGTGPRPSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXXI 227 MGVEKT++ G+GP P VGQ VT+ TG+ + D ++ I Sbjct: 1 MGVEKTIITQGSGPSPQVGQKVTMEYTGWLQKEDGTKGDQFDTSVGRGDFVVNIGVGQVI 60
Query: 228 KGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSV 380 KGWDEGV M++GE A L SPDY YG GFP I PNS L+F++E+ + Sbjct: 61 KGWDEGVTQMKLGEKATLHISPDYGYGPRGFPG-AIPPNSTLIFDVELKKI 110
>sp|Q6KBA8|FKB1A_EMENI FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1 Length = 108
Score = 83.6 bits (205), Expect = 6e-16 Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = +3
Query: 48 MGVEKTVLQAGTGPR-PSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXX 224 MGVE + G G P G TV++H TG +G KF S++D Sbjct: 1 MGVEVQRISPGDGKNFPKPGDTVSIHYTGTLADGS---KFDSSRD-RPGTFVTQIGVGRV 56
Query: 225 IKGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSVS 383 IKGWDEGVL + VGE A+L C+PDYAYGA GFP I PN+ L FE+E+L ++ Sbjct: 57 IKGWDEGVLQLSVGEKAKLICTPDYAYGARGFPP-VIPPNATLTFEVELLKIN 108
>sp|Q2U316|FKBP_ASPOR FK506-binding protein 1 OS=Aspergillus oryzae GN=fpr1 PE=3 SV=1 Length = 116
Score = 80.5 bits (197), Expect = 5e-15 Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Frame = +3
Query: 48 MGVEKTVLQAGTGPRPSVGQTVTVHCTGY------GKNGDLSQKFWSTKDPXXXXXXXXX 209 MGVE+ ++ G+GP P+ G V++H TG+ G ++F S++ P Sbjct: 1 MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNI 60
Query: 210 XXXXXIKGWDEGVLGMQVGEVARLKCSPDYAYG---AGGFPSWGIQPNSELVFEIEVLSV 380 IKGWDEGV+ M +GE + L +PDY YG AG P+ NS L+FE+E+L + Sbjct: 61 GQGKVIKGWDEGVMQMSLGEKSTLTITPDYGYGDKAAGKIPA-----NSTLIFEVELLKI 115
Query: 381 S 383 + Sbjct: 116 N 116
>sp|P0C1J3|FKBP1_RHIOR FK506-binding protein 1 OS=Rhizopus oryzae GN=FKBP1 PE=3 SV=1 Length = 108
Score = 80.1 bits (196), Expect = 7e-15 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 1/113 (0%) Frame = +3
Query: 48 MGVEKTVLQAGTGPR-PSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXX 224 MGV +Q G G P G TVT+H TG +NG + +P Sbjct: 1 MGVTVETIQPGDGKNFPKKGDTVTMHYTGTLQNGSVFDSSVRRNEPFVTQIGVGRV---- 56
Query: 225 IKGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSVS 383 IKGWDEGVL + +G+ A L C+PDYAYG GFP I PN+ L FE+E+L ++ Sbjct: 57 IKGWDEGVLQLSLGQKANLICTPDYAYGPRGFPP-VIPPNATLNFEVELLKIN 108
>sp|O42993|FKBP_SCHPO FK506-binding protein OS=Schizosaccharomyces pombe GN=SPBC839.17c PE=2 SV=1 Length = 112
Score = 79.3 bits (194), Expect = 1e-14 Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = +3
Query: 48 MGVEKTVLQAGTGPR-PSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXX 224 MGVEK V+ +G G P G +T+H TG NG +KF S+ D Sbjct: 1 MGVEKQVISSGNGQDFPKPGDRITMHYTGTLTNG---KKFDSSVD-RGSPFVCTIGVGQL 56
Query: 225 IKGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSVS 383 I+GWDEGV M +GE A+L +PDY YG GFP I PNS L+F++E+L+++ Sbjct: 57 IRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGL-IPPNSTLLFDVELLAIN 108
>sp|Q554J3|FKBP1_DICDI FK506-binding protein 1 OS=Dictyostelium discoideum GN=fkbp1 PE=3 SV=1 Length = 107
Score = 77.8 bits (190), Expect = 3e-14 Identities = 46/110 (41%), Positives = 59/110 (53%) Frame = +3
Query: 48 MGVEKTVLQAGTGPRPSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXXI 227 MGVE T+++ G G P VG VTVH G NG + P I Sbjct: 1 MGVEITIIKEGKGNIPPVGSNVTVHHAGTLTNGTVFDSSRKRGQPFNFKLGAGQV----I 56
Query: 228 KGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLS 377 KGWDEGV M+VGE ++L SPD+ YGA G I PN+ LVFE+E+++ Sbjct: 57 KGWDEGVAKMKVGETSKLTISPDFGYGARG-AGGVIPPNATLVFEVELIT 105
>sp|O42123|FKB1A_XENLA Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Xenopus laevis GN=fkbp1a PE=3 SV=3 Length = 108
Score = 77.0 bits (188), Expect = 6e-14 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Frame = +3
Query: 48 MGVEKTVLQAGTGPR-PSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXX 224 MGV+ + G G P GQTV VH G +NG +KF S++D Sbjct: 1 MGVQVETITEGDGRTFPKKGQTVVVHYVGSLENG---KKFDSSRD-RNKPFKFIIGRCEV 56
Query: 225 IKGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVL 374 I+GW+EGV M VG+ ARL CSPD+AYGA G P I PN+ L F++E+L Sbjct: 57 IRGWEEGVAQMSVGQRARLTCSPDFAYGATGHPGI-IPPNATLTFDVELL 105
>sp|P48375|FKB12_DROME 12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2 Length = 108
Score = 76.3 bits (186), Expect = 1e-13 Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Frame = +3
Query: 48 MGVEKTVLQAGTGPR-PSVGQTVTVHCTGYGKNGDLSQKFWSTKDPXXXXXXXXXXXXXX 224 MGV+ + G G P GQ VTVH TG +G KF S++D Sbjct: 1 MGVQVVPIAPGDGSTYPKNGQKVTVHYTGTLDDGT---KFDSSRD-RNKPFKFTIGKGEV 56
Query: 225 IKGWDEGVLGMQVGEVARLKCSPDYAYGAGGFPSWGIQPNSELVFEIEVLSV 380 I+GWDEGV + VG+ A+L CSPDYAYG+ G P I PNS L F++E+L V Sbjct: 57 IRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPG-VIPPNSTLTFDVELLKV 107
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q637 |
Definition |
tr|A7Q637|A7Q637_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera |
Align length |
111 |
Score (bit) |
175.0 |
E-value |
1.0e-42 |
Report |
|