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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956182
Clone id TST39A01NGRL0025_B05
Library
Length 414
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_B05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGCTTTCTATTTGCTTCGCGATCTCTGCTTTCCGCAAGCGTCCTCGCCATAGCCCCGTT
CTCCTGCACCGCATTGTTGTTTACATGCACTTCTAACTCCGACACAGGCTTCATTCTGAC
ACGCACATTTGCACATCCACGAGAGAATAGAGGAGCGGACTTCTGAATTTGCAACAATGG
GTTCCGGACTTCTCTGCTTTTGGCCGCTCCTCGCCCTCGTCAACCTCAACCCATAAAGAG
TGAAGCATTTCCGTGTGCTCCGCAGGCGCGCTTCTTCTCATCAAATACCAAAATTTTGCA
GGCACAAGGAAATATTATGTTTGCCTTTGGTCAGAGTGGTAACCGGTCTTACAACTCCGT
GCACAAGTCTTTTTCAAATTCAAAAGCCTGTGAAGCATCATATGGCTTGCTGAC
■■Homology search results ■■ -
sp_hit_id Q9Y2K2
Definition sp|Q9Y2K2|QSK_HUMAN Serine/threonine-protein kinase QSK OS=Homo sapiens
Align length 68
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956182|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_B05, 5'
         (414 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y2K2|QSK_HUMAN Serine/threonine-protein kinase QSK OS=Homo ...    30   3.8  
sp|Q24009|BICC_DROME Protein bicaudal C OS=Drosophila melanogast...    30   4.9  
sp|Q00974|YEA4_KLULA UDP-N-acetylglucosamine transporter YEA4 OS...    29   6.4  
sp|Q9Y4E5|ZN451_HUMAN Zinc finger protein 451 OS=Homo sapiens GN...    29   6.5  
sp|Q9D2H6|SP2_MOUSE Transcription factor Sp2 OS=Mus musculus GN=...    29   6.5  
sp|Q5E9U0|SP2_BOVIN Transcription factor Sp2 OS=Bos taurus GN=SP...    29   8.4  
sp|P53713|ITB1_FELCA Integrin beta-1 OS=Felis silvestris catus G...    29   8.4  
sp|Q8BIX3|CK046_MOUSE Uncharacterized protein C11orf46 homolog O...    29   8.4  
sp|Q8TC27|ADA32_HUMAN ADAM 32 OS=Homo sapiens GN=ADAM32 PE=1 SV=1      29   8.4  

>sp|Q9Y2K2|QSK_HUMAN Serine/threonine-protein kinase QSK OS=Homo
            sapiens GN=QSK PE=1 SV=3
          Length = 1263

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -3

Query: 340  TTLTKGKHNISLCLQNFGI**EEARLRSTRKCFTL----YGLRLTRARSGQKQRSPEPIV 173
            +TLTKG H+  L L   G    E+ L +      L    YG + T A S  K  S EP++
Sbjct: 1057 STLTKGCHDSPLLLSTGGPGDPESLLGTVSHAQELGIHPYGHQPTAAFSKNKVPSREPVI 1116

Query: 172  ANSEVRSS 149
             N   RSS
Sbjct: 1117 GNCMDRSS 1124


>sp|Q24009|BICC_DROME Protein bicaudal C OS=Drosophila melanogaster
           GN=BicC PE=1 SV=2
          Length = 905

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 254 CAPQARFFSSNTKILQAQGNIMFAFGQSGNRSYNSV 361
           CAP  ++   +    QAQ   M A GQS N +Y  V
Sbjct: 537 CAPTQKYMQLHNSFQQAQNRSMVAGGQSNNGNYLQV 572


>sp|Q00974|YEA4_KLULA UDP-N-acetylglucosamine transporter YEA4
           OS=Kluyveromyces lactis GN=YEA4 PE=3 SV=1
          Length = 328

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 16  FAISAFRKRPRHSPVLLHRIVVYMHF 93
           F+   FR RPRH P+ +H + V++ F
Sbjct: 55  FSHFPFRLRPRHIPLKIHMLAVFLFF 80


>sp|Q9Y4E5|ZN451_HUMAN Zinc finger protein 451 OS=Homo sapiens
           GN=ZNF451 PE=2 SV=2
          Length = 1061

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/80 (22%), Positives = 34/80 (42%)
 Frame = -3

Query: 268 RLRSTRKCFTLYGLRLTRARSGQKQRSPEPIVANSEVRSSILSWMCKCACQNEACVGVRS 89
           R  S ++  +L  + + + +   K +S E +    + +S + +W C+C   N+      +
Sbjct: 429 RTMSIKESSSLECIAIPKKKMNLKDKSHEGVACVQKEKSVVKTWFCEC---NQRFPSEDA 485

Query: 88  ACKQQCGAGERGYGEDACGK 29
             K    A   GY    CGK
Sbjct: 486 VEKHVFSANTMGYKCVVCGK 505


>sp|Q9D2H6|SP2_MOUSE Transcription factor Sp2 OS=Mus musculus GN=Sp2
           PE=2 SV=2
          Length = 612

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 209 PRPRQPQPIKSEAFPCAPQARFFSSNTKILQAQGNIMFAFGQSGNRSY 352
           P PR+  PIK    P +P    FS    IL ++GNI+   G   + SY
Sbjct: 62  PTPRKLVPIKPAPLPLSPCKNSFS----ILSSKGNILQIQGSQLSTSY 105


>sp|Q5E9U0|SP2_BOVIN Transcription factor Sp2 OS=Bos taurus GN=SP2
           PE=2 SV=1
          Length = 613

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 209 PRPRQPQPIKSEAFPCAPQARFFSSNTKILQAQGNIMFAFGQSGNRSY 352
           P PR+  PIK    P +P    F     IL ++GNI+   G   + SY
Sbjct: 62  PTPRKLVPIKPAPLPLSPSKNSFG----ILSSKGNILQIQGSQLSTSY 105


>sp|P53713|ITB1_FELCA Integrin beta-1 OS=Felis silvestris catus
           GN=ITGB1 PE=2 SV=1
          Length = 798

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 148 ILSWMCKCACQNEACVGVRSACKQQCGAGERGYGEDACGKQR 23
           IL ++C+C CQNE   G+ S+ K   G G    G   C + R
Sbjct: 457 ILQFICECECQNE---GIPSSPKCHEGNGSFECGACRCNEGR 495


>sp|Q8BIX3|CK046_MOUSE Uncharacterized protein C11orf46 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 276

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = -3

Query: 226 RLTRARSGQKQRSPEPIVANSEVRSS----ILSWMCKCACQNEACVGVRSAC----KQQC 71
           +LT+A S    R   P  A S+V  S    I S M  C C +E C+G   AC      +C
Sbjct: 173 KLTKATSAASDRQIIP--AKSKVYDSQGLLIFSGMDLCDCLDEDCLGCFYACPTCGSTKC 230

Query: 70  GA 65
           GA
Sbjct: 231 GA 232


>sp|Q8TC27|ADA32_HUMAN ADAM 32 OS=Homo sapiens GN=ADAM32 PE=1 SV=1
          Length = 787

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -3

Query: 265 LRSTRKCFTLYGLRLTRARSGQKQRSPEPIVANSEVRSSILSWMCKCACQNEACVGVRSA 86
           LRS +   +  G++  + +   +++SP+P+  N  +  + +     C C  EA  G  S 
Sbjct: 364 LRSFQNFISNVGVKCLQNKPQMQKKSPKPVCGNGRLEGNEI-----CDCGTEAQCGPASC 418

Query: 85  C 83
           C
Sbjct: 419 C 419
tr_hit_id A1CTU9
Definition tr|A1CTU9|A1CTU9_ASPCL Ubiquitin-protein ligase (Asi3), putative OS=Aspergillus clavatus
Align length 74
Score (bit) 30.8
E-value 5.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956182|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_B05, 5'
         (414 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CTU9|A1CTU9_ASPCL Ubiquitin-protein ligase (Asi3), putative...    31   5.3  
tr|A7NS75|A7NS75_ROSCS Oxidoreductase domain protein OS=Roseifle...    33   9.3  

>tr|A1CTU9|A1CTU9_ASPCL Ubiquitin-protein ligase (Asi3), putative
            OS=Aspergillus clavatus GN=ACLA_084310 PE=4 SV=1
          Length = 984

 Score = 30.8 bits (68), Expect(2) = 5.3
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
 Frame = -3

Query: 208  SGQKQRSPEPIVANSEVRSSILSWMCKCACQNEAC--------VGVRSACKQQCGAGERG 53
            SG     P+ ++  +  RS I++W C+C C  E C         G    C+Q+ G   R 
Sbjct: 910  SGLGPDGPQCVICQTNPRS-IITWPCRCLCVCEECRVSLAMNNFGSCVTCRQEVGGFVRL 968

Query: 52   YGEDACGKQRSRSK 11
            +  D    ++S S+
Sbjct: 969  WNIDYGTVRQSHSQ 982



 Score = 22.7 bits (47), Expect(2) = 5.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 278 RRSAPAEHTEMLHSLWVEVDEGEERPKAE 192
           RR  P E +EML  L +       RP A+
Sbjct: 873 RRPTPEEESEMLEKLILSKRSEANRPAAD 901


>tr|A7NS75|A7NS75_ROSCS Oxidoreductase domain protein OS=Roseiflexus
           castenholzii (strain DSM 13941 / HLO8) GN=Rcas_4405 PE=4
           SV=1
          Length = 369

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +3

Query: 207 LLALVNLNP*RVKHFRVLRRRASSHQIPKFCRHKEILCLPLVRVVTGLTTP 359
           ++A+ +++P R +       RA+ + +PK C  +E+L  P + +V  LTTP
Sbjct: 31  VVAVADIDPDRAQ------ARAAEYNVPKACSVEELLADPDIEIVINLTTP 75