DK956196 |
Clone id |
TST39A01NGRL0025_B19 |
Library |
TST39 |
Length |
625 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_B19. 5' end sequence. |
Accession |
DK956196 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GTTTCTGCCTTTCCGCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCT CCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTT CTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGT CGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTG AGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACATGACAGACATGA TCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCATGTG CGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTAAGCC CAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAG CCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATACCTATGTTGTTA TCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATG TGAAGCTCTTTAATGCGGTTGCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
131 |
Score (bit) |
234.0 |
E-value |
2.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956196|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_B19, 5' (625 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 234 2e-61 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 231 2e-60 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 226 6e-59 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 223 5e-58 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 218 2e-56 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 178 2e-44 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 177 4e-44 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 174 4e-43 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 172 1e-42 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 169 8e-42 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 163 8e-40 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 80 8e-15 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 77 5e-14 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 76 2e-13 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 76 2e-13 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 73 1e-12 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 72 3e-12 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 71 4e-12 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 69 2e-11 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 65 4e-10 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 61 4e-09 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 61 5e-09 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 60 1e-08 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 59 2e-08 sp|O29556|THI4_ARCFU Putative thiazole biosynthetic enzyme OS=Ar... 59 2e-08 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 59 2e-08 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 58 3e-08 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 58 4e-08
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 234 bits (598), Expect = 2e-61 Identities = 112/131 (85%), Positives = 125/131 (95%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 591 RPNVKLFNAVA 623 RPNVKLFNAVA Sbjct: 183 RPNVKLFNAVA 193
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 231 bits (589), Expect = 2e-60 Identities = 114/131 (87%), Positives = 124/131 (94%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 591 RPNVKLFNAVA 623 RPNVKLFNAVA Sbjct: 176 RPNVKLFNAVA 186
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 226 bits (577), Expect = 6e-59 Identities = 110/131 (83%), Positives = 121/131 (92%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 591 RPNVKLFNAVA 623 RPNVKLFNAVA Sbjct: 179 RPNVKLFNAVA 189
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 223 bits (569), Expect = 5e-58 Identities = 110/131 (83%), Positives = 120/131 (91%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 591 RPNVKLFNAVA 623 RPNVKLFNAVA Sbjct: 182 RPNVKLFNAVA 192
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 218 bits (556), Expect = 2e-56 Identities = 108/131 (82%), Positives = 120/131 (91%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 591 RPNVKLFNAVA 623 RPNVKLFNAVA Sbjct: 179 RPNVKLFNAVA 189
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 178 bits (452), Expect = 2e-44 Identities = 86/132 (65%), Positives = 110/132 (83%), Gaps = 1/132 (0%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 407 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 588 ARPNVKLFNAVA 623 A PNVKLFNA A Sbjct: 169 ALPNVKLFNATA 180
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 177 bits (449), Expect = 4e-44 Identities = 88/130 (67%), Positives = 105/130 (80%), Gaps = 1/130 (0%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 588 ARPNVKLFNA 617 PN+KLFNA Sbjct: 164 QMPNIKLFNA 173
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 174 bits (440), Expect = 4e-43 Identities = 88/134 (65%), Positives = 109/134 (81%), Gaps = 3/134 (2%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 581 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 582 LLARPNVKLFNAVA 623 +L+ PNVKLFNA A Sbjct: 168 VLSFPNVKLFNATA 181
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 172 bits (437), Expect = 1e-42 Identities = 86/130 (66%), Positives = 103/130 (79%), Gaps = 1/130 (0%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 588 ARPNVKLFNA 617 PN KLFNA Sbjct: 168 QLPNCKLFNA 177
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 169 bits (429), Expect = 8e-42 Identities = 82/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 588 ARPNVKLFNA 617 PNVKLFNA Sbjct: 158 QLPNVKLFNA 167
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
131 |
Score (bit) |
239.0 |
E-value |
7.0e-62 |
Report |
|