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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956204
Clone id TST39A01NGRL0025_C03
Library
Length 623
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_C03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTGTCACATGGGGGCTTATAGCAGGATCTCATGATTCTCTGAAAGAAGGATATAGAGGG
GTTTCGAGGGCTGCGTATGTGGCTAAATCAGTTGGCAGGAATAGTGCATTATGGGGCTGT
TGTGCGGGAACTTACTACGGATTCAATTGTGGCTTGGAAAGATTGAGGAGGAGAAGAGAT
TGGGCAAATGCAGCTGTTGCTGGTGCTGTCACAGGTGCACTGCTAGCTGCGAAATCTGGG
AGTGGCGCTAAAATTGGTGCTACTTCAGCTACGTTCGCTGCTGTTGCAACTCTTTTACAC
CATGTATCTCCACTCCAATATCCACCTACTGGCCTTTAGCTTGAGAGTTTGGGGCTTACA
AGCAAAACTGGAAATATGTAAATGCTCACTTAACTGCAGAAGTATTGGGCCTCTCAATCA
AGTAAATGAGCCGCAAGGTTTTGCAGTGAAGTTGTATCATTCTATAAACTATTGCTTTCT
TTGCCATTCTCGGCAACTTGATTTCACGGTTCAAACATGATAGAAGGCAAGCCTCCCTGT
CAGTTACCTTTTCAGCCATTCAGCTCAGCCATGAAATTGATCGTGTCTTTTAGGTGGGTC
TTTTGGCACATGGATACCAACTC
■■Homology search results ■■ -
sp_hit_id Q5XKK7
Definition sp|Q5XKK7|CO017_HUMAN Uncharacterized protein C15orf17 OS=Homo sapiens
Align length 16
Score (bit) 30.8
E-value 5.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956204|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_C03, 5'
         (623 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5XKK7|CO017_HUMAN Uncharacterized protein C15orf17 OS=Homo s...    31   5.9  
sp|P29068|CBPT_THEVU Carboxypeptidase T OS=Thermoactinomyces vul...    30   7.7  

>sp|Q5XKK7|CO017_HUMAN Uncharacterized protein C15orf17 OS=Homo
           sapiens GN=C15orf17 PE=1 SV=1
          Length = 198

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 189 CSCCWCCHRCTASCEI 236
           CSCCWCC   ++SC +
Sbjct: 182 CSCCWCCLGDSSSCTL 197


>sp|P29068|CBPT_THEVU Carboxypeptidase T OS=Thermoactinomyces
           vulgaris GN=cpt PE=1 SV=1
          Length = 424

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSAL-WGCCAGT 132
           G  + + +GS+ S ++  +  S ++YV   + RN    WGCC G+
Sbjct: 213 GGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGS 257
tr_hit_id A9TZ45
Definition tr|A9TZ45|A9TZ45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 61
Score (bit) 86.3
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956204|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_C03, 5'
         (623 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TZ45|A9TZ45_PHYPA Predicted protein OS=Physcomitrella paten...    86   1e-15
tr|A7Q0D7|A7Q0D7_VITVI Chromosome chr7 scaffold_42, whole genome...    60   8e-08
tr|A9NYH8|A9NYH8_PICSI Putative uncharacterized protein OS=Picea...    57   9e-07
tr|Q9LZH8|Q9LZH8_ARATH Putative uncharacterized protein F26K9_31...    56   2e-06
tr|Q8LGH9|Q8LGH9_ARATH Putative membrane channel protein OS=Arab...    44   0.010
tr|Q9ZV24|Q9ZV24_ARATH Putative membrane channel protein (At2g28...    43   0.017
tr|A9NKV8|A9NKV8_PICSI Putative uncharacterized protein OS=Picea...    43   0.017
tr|A7NZ04|A7NZ04_VITVI Chromosome chr6 scaffold_3, whole genome ...    41   0.050
tr|Q65XV6|Q65XV6_ORYSJ Os05g0111200 protein OS=Oryza sativa subs...    41   0.066
tr|B8AWZ4|B8AWZ4_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.066
tr|A9TN08|A9TN08_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.066
tr|A3AZ87|A3AZ87_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.066
tr|B8LMN9|B8LMN9_PICSI Putative uncharacterized protein OS=Picea...    40   0.15 
tr|B6P7Q7|B6P7Q7_BRAFL Putative uncharacterized protein OS=Branc...    40   0.15 
tr|Q93Z87|Q93Z87_BROIN Stress-inducible membrane pore protein OS...    39   0.25 
tr|B3VTB6|B3VTB6_SORBI Amino acid selective channel protein OS=S...    39   0.25 
tr|B8A9Y0|B8A9Y0_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.33 
tr|Q41050|Q41050_PEA Core protein OS=Pisum sativum PE=2 SV=1           38   0.43 
tr|O82688|O82688_HORVU Amino acid selective channel protein OS=H...    38   0.56 
tr|Q5CZ54|Q5CZ54_SOLTU Pom14 protein OS=Solanum tuberosum GN=pom...    37   1.2  
tr|B7FGP0|B7FGP0_MEDTR Putative uncharacterized protein OS=Medic...    37   1.2  
tr|B6TFZ9|B6TFZ9_MAIZE Amino acid selective channel protein OS=Z...    36   1.6  
tr|B4FK99|B4FK99_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.6  
tr|A7Q8N5|A7Q8N5_VITVI Chromosome chr5 scaffold_64, whole genome...    36   1.6  
tr|A9PFS3|A9PFS3_POPTR Putative uncharacterized protein OS=Popul...    36   2.1  
tr|Q9FP64|Q9FP64_ORYSJ Putative stress-inducible membrane pore p...    35   2.8  
tr|B8A6Q5|B8A6Q5_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.8  
tr|A1IWC8|A1IWC8_SPOST Putative uncharacterized protein dg3i (Fr...    35   2.8  
tr|A9U1R6|A9U1R6_PHYPA Predicted protein OS=Physcomitrella paten...    35   4.7  
tr|B6UFN0|B6UFN0_MAIZE Putative uncharacterized protein OS=Zea m...    34   6.2  

>tr|A9TZ45|A9TZ45_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172788 PE=4 SV=1
          Length = 146

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 35/61 (57%), Positives = 45/61 (73%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           GV WG+  GS+D++KEG+ G SRA YVAKS+ RN   WGC AG Y G NCG+E +R ++D
Sbjct: 35  GVAWGMFMGSYDAVKEGHLGASRALYVAKSITRNGLGWGCFAGAYLGLNCGVESVRNKKD 94

Query: 181 W 183
           W
Sbjct: 95  W 95


>tr|A7Q0D7|A7Q0D7_VITVI Chromosome chr7 scaffold_42, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028011001
           PE=4 SV=1
          Length = 130

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           G  WGL    +D+ K+G  G+SR A+VAKSVG+ S   G  AG + G  C ++R RR+ D
Sbjct: 26  GAIWGLCMSPYDASKKGLTGLSRTAFVAKSVGKISFQCGLVAGVFSGTRCVVQRHRRQND 85

Query: 181 W 183
           W
Sbjct: 86  W 86


>tr|A9NYH8|A9NYH8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 143

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           G+TWG+  G ++  K   +G +RA  VAK VG+     G  AG Y  F+CG+ER RR++D
Sbjct: 32  GLTWGMFIGPYEVTKVS-QGSTRAILVAKLVGKCGLQCGSFAGIYTAFSCGIERYRRKKD 90

Query: 181 W 183
           W
Sbjct: 91  W 91


>tr|Q9LZH8|Q9LZH8_ARATH Putative uncharacterized protein F26K9_310
           OS=Arabidopsis thaliana GN=F26K9_310 PE=2 SV=1
          Length = 136

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/61 (44%), Positives = 38/61 (62%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           G  +GL AG  D+ K G  GVS+A++VAKS+GR     G  +G +   +CGL+R R + D
Sbjct: 26  GGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKND 85

Query: 181 W 183
           W
Sbjct: 86  W 86


>tr|Q8LGH9|Q8LGH9_ARATH Putative membrane channel protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 148

 Score = 43.5 bits (101), Expect = 0.010
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           GVT  L   ++ ++++G    S   +  K + +    WG   G Y G   G+ER+R  RD
Sbjct: 40  GVTKSLAEDTYKAIEKGSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRD 99

Query: 181 W 183
           W
Sbjct: 100 W 100


>tr|Q9ZV24|Q9ZV24_ARATH Putative membrane channel protein
           (At2g28900) (At2g28900/F8N16.19) OS=Arabidopsis thaliana
           GN=At2g28900 PE=2 SV=1
          Length = 148

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           GVT  L   ++ ++ +G    S   +  K + +    WG   G Y G   G+ER+R  RD
Sbjct: 40  GVTKSLAEDTYKAIDKGSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRD 99

Query: 181 W 183
           W
Sbjct: 100 W 100


>tr|A9NKV8|A9NKV8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 147

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = +1

Query: 1   GVTWGLIAGSHDSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRD 180
           G +  L+  ++ SL +G        +  K +G     WG  AG Y G   G+ER+R RRD
Sbjct: 40  GASRVLVEETYSSLSKGSVTKHDLEHTIKKMGIEGLKWGAVAGVYTGVEYGVERIRGRRD 99

Query: 181 W 183
           W
Sbjct: 100 W 100


>tr|A7NZ04|A7NZ04_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024323001
           PE=4 SV=1
          Length = 129

 Score = 41.2 bits (95), Expect = 0.050
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
 Frame = +1

Query: 13  GLIAGSHDSLKEGYRGVSRAA-------YVAKSVGRNSALWGCCAGTYYGFNCGLERLRR 171
           G +A +  + +E Y  V R +       +  K + + +A WG  AG Y G   G ER+R 
Sbjct: 20  GTVAAARAAAEEAYYVVKRGSISRHTVEHSLKKMCKEAAYWGTVAGVYVGMEYGAERIRG 79

Query: 172 RRDW 183
            RDW
Sbjct: 80  TRDW 83


>tr|Q65XV6|Q65XV6_ORYSJ Os05g0111200 protein OS=Oryza sativa subsp.
           japonica GN=P0016H04.12 PE=2 SV=1
          Length = 146

 Score = 40.8 bits (94), Expect = 0.066
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +1

Query: 34  DSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRDW 183
           D L  G     +  ++ K + +  A WG  AG Y G   G+ER+R R DW
Sbjct: 51  DCLHRGDVSKHKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDW 100


>tr|B8AWZ4|B8AWZ4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_18168 PE=4 SV=1
          Length = 146

 Score = 40.8 bits (94), Expect = 0.066
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +1

Query: 34  DSLKEGYRGVSRAAYVAKSVGRNSALWGCCAGTYYGFNCGLERLRRRRDW 183
           D L  G     +  ++ K + +  A WG  AG Y G   G+ER+R R DW
Sbjct: 51  DCLHRGDVSKHKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDW 100