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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956222
Clone id TST39A01NGRL0025_C21
Library
Length 613
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_C21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTGTCGGGTTTGCAGGTTGGAGTTTAGACCGCCATAGCCAAATCCTTCATTGGAGCAAAC
ACACTCTACGTGTTCAGAGAAGTGGGTCAAATCGCCCTTTCGCAGTTCATATTTAGCTCC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGCCTGCACATATCCCTATTTCTGATGG
CACTTTGTGCTTCGCCTGTGGGAATTTATCTCTCCTCTTGCTCCGGATCGTCTGCCTCTG
CTCAATTTCGAGCCTCCCAGCTCCAATGCCTAGCTTCCAAATTTCAATGGGATCCCCTCA
GGGTTGCACACTTCAGGCTTCTTTGCGGGAATAACCTCTTACCAGCGAACTCATGCAGAA
GAAGCGCCATTTTCAGCTCCCCTCTTGCAAGGCCTCGAATGCTACATGTAGTGTCCTCAC
ATGAGCGAGGCTCAGAAACAGCGGAGGAGAAACCGTGCATGGAGGCAAAGCAGCAGAAAA
CTGTGCTGGAAAGGGTTACAGAGGCGGCTCTGGCATGCTTTGATATTGTCAAGAAGCCTG
CCGTTGTAGCCCTTGTTGTTGGCTTGTTACTCACACAGATTCCAGATGCATGGGCAGCAT
CAGGGGGGATGAT
■■Homology search results ■■ -
sp_hit_id Q8N8S7
Definition sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens
Align length 24
Score (bit) 31.6
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_C21, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens GN=...    32   3.4  
sp|P21506|ZNF10_HUMAN Zinc finger protein 10 OS=Homo sapiens GN=...    30   7.5  
sp|A4JLS0|KHSE_BURVG Homoserine kinase OS=Burkholderia vietnamie...    30   7.5  
sp|Q0BAN2|KHSE_BURCM Homoserine kinase OS=Burkholderia ambifaria...    30   7.5  
sp|Q8WZ75|ROBO4_HUMAN Roundabout homolog 4 OS=Homo sapiens GN=RO...    30   9.8  
sp|Q3T1I4|PRRC1_RAT Protein PPRC1 OS=Rattus norvegicus GN=Prrc1 ...    30   9.8  
sp|Q393M6|KHSE_BURS3 Homoserine kinase OS=Burkholderia sp. (stra...    30   9.8  

>sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens
           GN=ENAH PE=1 SV=2
          Length = 591

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 15/24 (62%), Positives = 15/24 (62%)
 Frame = -2

Query: 513 PEPPL*PFPAQFSAALPPCTVSPP 442
           P PPL P PAQ S ALPP    PP
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPP 338


>sp|P21506|ZNF10_HUMAN Zinc finger protein 10 OS=Homo sapiens
           GN=ZNF10 PE=1 SV=3
          Length = 573

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +3

Query: 282 FQWDPLRVAHFRLLCGNNLLPANSCRRSAIFSSPLARPRMLHVVSSHERGSETAEEKPCM 461
           F W    V H R   G+ L   N C +S + SS L R +  H       G +  E   C 
Sbjct: 330 FSWFSHLVTHQRTHTGDKLYTCNQCGKSFVHSSRLIRHQRTHT------GEKPYECPECG 383

Query: 462 EAKQQKTVL 488
           ++ +Q T L
Sbjct: 384 KSFRQSTHL 392


>sp|A4JLS0|KHSE_BURVG Homoserine kinase OS=Burkholderia
           vietnamiensis (strain G4 / LMG 22486) GN=thrB PE=3 SV=1
          Length = 332

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 283 FNGIPSGLHTSGFFAG-------ITSYQRTHAEEAPFSAPLLQGL 396
           F GIPSG+  S FF         +T +++  AE+ PF   L++ L
Sbjct: 27  FRGIPSGIENSNFFLTTTRGEYVLTIFEKLTAEQLPFYLDLMRHL 71


>sp|Q0BAN2|KHSE_BURCM Homoserine kinase OS=Burkholderia ambifaria
           (strain ATCC BAA-244 / AMMD) GN=thrB PE=3 SV=1
          Length = 332

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 283 FNGIPSGLHTSGFFAG-------ITSYQRTHAEEAPFSAPLLQGL 396
           F GIPSG+  S FF         +T +++  AE+ PF   L++ L
Sbjct: 27  FRGIPSGIENSNFFLTTTRGEYVLTIFEKLTAEQLPFYLDLMRHL 71


>sp|Q8WZ75|ROBO4_HUMAN Roundabout homolog 4 OS=Homo sapiens GN=ROBO4
           PE=1 SV=1
          Length = 1007

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = -1

Query: 439 VSEPRSCEDTTCSIRGLARGELKMALLLHEFAGKRLFPQRSLKCATLRGSH*NLEAR 269
           +S P S  D+ CS RGL+   L +A      A K+   Q +     LRGSH +LE R
Sbjct: 614 LSSPCSSSDSLCSRRGLSSPRLSLAPAEAWKAKKKQELQHANSSPLLRGSH-SLELR 669


>sp|Q3T1I4|PRRC1_RAT Protein PPRC1 OS=Rattus norvegicus GN=Prrc1
           PE=2 SV=1
          Length = 443

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +1

Query: 211 SPLAPDRLPLLNFEPPSSNA*LPNFNGIPSGLHTSGFFAGIT-SYQRTHAEEAP------ 369
           SP      P L+  PP+++A     +  PSG   SGF  G T    R HA  AP      
Sbjct: 95  SPATAFSGPPLSHFPPATSASGALLSAPPSGPPISGFSVGTTYDITRGHAGRAPQTPLMP 154

Query: 370 -FSAPLLQGL 396
            FSAP + G+
Sbjct: 155 SFSAPPVTGI 164


>sp|Q393M6|KHSE_BURS3 Homoserine kinase OS=Burkholderia sp. (strain
           383) GN=thrB PE=3 SV=1
          Length = 332

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
 Frame = +1

Query: 283 FNGIPSGLHTSGFFAG-------ITSYQRTHAEEAPFSAPLLQGL 396
           F GIPSG+  S FF         +T +++  AE+ PF   L+  L
Sbjct: 27  FRGIPSGIENSNFFLTTTRGEYVLTIFEKLTAEQLPFYLDLMSHL 71
tr_hit_id Q4WUN8
Definition tr|Q4WUN8|Q4WUN8_ASPFU Neutral amino acid permease, putative OS=Aspergillus fumigatus
Align length 79
Score (bit) 34.7
E-value 4.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_C21, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4WUN8|Q4WUN8_ASPFU Neutral amino acid permease, putative OS=...    35   4.5  
tr|A1DES3|A1DES3_NEOFI Amino acid transporter, putative OS=Neosa...    34   5.9  
tr|A0E8C7|A0E8C7_PARTE Chromosome undetermined scaffold_82, whol...    34   7.7  
tr|Q7ZU97|Q7ZU97_DANRE Zinc finger, AN1-type domain 5b OS=Danio ...    33   10.0 
tr|A4I6K5|A4I6K5_LEIIN Calpain-like protein, putative (Cysteine ...    33   10.0 

>tr|Q4WUN8|Q4WUN8_ASPFU Neutral amino acid permease, putative
           OS=Aspergillus fumigatus GN=AFUA_5G09120 PE=4 SV=1
          Length = 476

 Score = 34.7 bits (78), Expect = 4.5
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = -1

Query: 562 PTTRATTAGFLTISKHARAASVTLSSTVFCCFASMHGFSSAVSEPRSCED----TTCSIR 395
           P T     GF  I     A  +T S+T+FC  A+   F   +SE R   D       S+ 
Sbjct: 224 PQTGPFDLGFRAIGNPTFAVGITASATIFCSSAATSAFLPVISEMRKPRDYPKAVYLSMS 283

Query: 394 GLARGELKMALLLHEFAGK 338
            +    L  +L+++ + GK
Sbjct: 284 FVTTSYLAFSLVIYAWCGK 302


>tr|A1DES3|A1DES3_NEOFI Amino acid transporter, putative
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_078200 PE=4 SV=1
          Length = 476

 Score = 34.3 bits (77), Expect = 5.9
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = -1

Query: 562 PTTRATTAGFLTISKHARAASVTLSSTVFCCFASMHGFSSAVSEPRSCED----TTCSIR 395
           P T     GF  I     A  +T S+T+FC  A+   F   +SE R   D       S+ 
Sbjct: 224 PQTGPFDLGFRAIGHPTFAVGITASATIFCSSAATSAFLPVISEMRKPRDYPKAVYLSMS 283

Query: 394 GLARGELKMALLLHEFAGK 338
            +    L  +L+++ + GK
Sbjct: 284 FVTTSYLAFSLVIYAWCGK 302


>tr|A0E8C7|A0E8C7_PARTE Chromosome undetermined scaffold_82, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00024272001 PE=4 SV=1
          Length = 1966

 Score = 33.9 bits (76), Expect = 7.7
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
 Frame = +2

Query: 392 ASNATCSVLT*ARLRNSGGE-------TVHGGKAAENCAGKGYRGGSGML*YCQEACRCS 550
           A++A C  ++  +  NS G+       T    K AE+C GKG  GGSG   +   +CR  
Sbjct: 99  ATDAECQAIS--KQCNSDGQAFCVDPATCTTYKTAEDCTGKGSSGGSGTCVW-DTSCREQ 155

Query: 551 PC--CWLVTHTDSRCMGSIRG 607
            C    +  +TD++C   I+G
Sbjct: 156 KCTEADVTFNTDAQCNNFIKG 176


>tr|Q7ZU97|Q7ZU97_DANRE Zinc finger, AN1-type domain 5b OS=Danio
           rerio GN=zfand5b PE=2 SV=1
          Length = 212

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 342 PANSCRRSAIFSSPLARPRMLHVVSSHERGSETAE-EKPCMEAKQQKTVLERVTEAALAC 518
           P ++   S++ SSP +    + ++ +    S  A  E PC  A     V +++TE +++C
Sbjct: 48  PISTMASSSVTSSPTSEASAIQIIEATLNNSSAASAESPCAAAAAALPVTQQMTEMSISC 107

Query: 519 FDIVKKP 539
            D    P
Sbjct: 108 EDDAASP 114


>tr|A4I6K5|A4I6K5_LEIIN Calpain-like protein, putative (Cysteine
           peptidase, clan ca, family c2, putative) OS=Leishmania
           infantum GN=LinJ31.1150 PE=4 SV=1
          Length = 936

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 333 NLLPAN--SCRRSAIFSSPLARPRMLHVVSSHERGSETAEEKPCMEAKQQKTVLERVTEA 506
           ++ PAN  +  +   F   ++ P +LHV+  +    E A  + C+  K  + +LER  E 
Sbjct: 38  HISPANRMAAEKLVAFVQAVSDPEVLHVIYDYLEEHEKAVPRYCLATKACRELLERKEEM 97

Query: 507 ALAC 518
            +AC
Sbjct: 98  LMAC 101