DK956238 |
Clone id |
TST39A01NGRL0025_D13 |
Library |
TST39 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_D13. 5' end sequence. |
Accession |
DK956238 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL177Contig1 |
Sequence |
GGCATTGATGTTGGCTCTTTTTGAGCAGCAGCAGGTTGGTGTGCAGGGTGCGCTCTTTAG CTTAGGTTTTTGGAGAAGAGAGTGAGTGTGCGGGGATCTTATGTGCAGCAGACATGGTGC TCTACAATTTCAAACAGATTACCATTGTGCCTTCTTCCAAGGACTTCGTGGACATCATCC TGTCGCGCACTCAGCGGCAGACCCCCACGGTTGTGCACAAGGGTTACGCCATTGCCCGCC TGCGACAGTTCTACATGCGCAAGGTGAAGTTCACCCAACAGAATTTCCATGAGAAGCTCA CCAAAATTGTGGAGGACTTCCCCCGCTTGGATGACATACATCCCTTCTACGGCGATCTTC TCAATGTTCTCTATGATAGGGACCACTACAAGCTAGCTCTAGGACAGATCAACACTGCAC GCAACCTCATCAGCAAGGTTTGCAAGGATTATGTGCGTCTCCTTAAGTATGGAGACTCTC TGTACAGGTGCAAGAAGCTCAAGGTTGCCGCCCTGGGACGCATGTGCACTATCATGAAGC GTATTGGACCCAGCTTGTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C6I8 |
Definition |
sp|Q9C6I8|NOG1_ARATH Probable nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana |
Align length |
149 |
Score (bit) |
253.0 |
E-value |
5.0e-67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NZR5 |
Definition |
tr|A7NZR5|A7NZR5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
149 |
Score (bit) |
268.0 |
E-value |
2.0e-70 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956238|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_D13, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NZR5|A7NZR5_VITVI Chromosome chr6 scaffold_3, whole genome ... 268 2e-70 tr|A7QNT3|A7QNT3_VITVI Chromosome undetermined scaffold_134, who... 266 4e-70 tr|A9S563|A9S563_PHYPA Predicted protein OS=Physcomitrella paten... 266 6e-70 tr|A5BG44|A5BG44_VITVI Putative uncharacterized protein OS=Vitis... 265 2e-69 tr|Q69YA7|Q69YA7_ORYSJ Putative nucleolar GTP-binding protein (P... 259 7e-68 tr|Q8LIM1|Q8LIM1_ORYSJ Putative GTP binding protein OS=Oryza sat... 258 2e-67 tr|A3BFW1|A3BFW1_ORYSJ Putative uncharacterized protein OS=Oryza... 258 2e-67 tr|A7RHM9|A7RHM9_NEMVE Predicted protein OS=Nematostella vectens... 244 2e-63 tr|Q5ZM18|Q5ZM18_CHICK Putative uncharacterized protein OS=Gallu... 241 3e-62 tr|A4RTG3|A4RTG3_OSTLU Predicted protein OS=Ostreococcus lucimar... 240 3e-62 tr|B6P0U9|B6P0U9_BRAFL Putative uncharacterized protein OS=Branc... 240 3e-62 tr|Q01DT4|Q01DT4_OSTTA NOG1_ARATH Probable nucleolar GTP-binding... 239 1e-61 tr|B4KTH4|B4KTH4_DROMO GI19517 OS=Drosophila mojavensis GN=GI195... 238 1e-61 tr|B4QH85|B4QH85_DROSI GD10078 OS=Drosophila simulans GN=GD10078... 238 2e-61 tr|B4P415|B4P415_DROYA GE22324 OS=Drosophila yakuba GN=Dyak\GE22... 238 2e-61 tr|B4HSR8|B4HSR8_DROSE GM20605 OS=Drosophila sechellia GN=GM2060... 238 2e-61 tr|B3N7H3|B3N7H3_DROER GG10559 OS=Drosophila erecta GN=GG10559 P... 238 2e-61 tr|B3MFK3|B3MFK3_DROAN GF13082 OS=Drosophila ananassae GN=GF1308... 238 2e-61 tr|Q4SNJ7|Q4SNJ7_TETNG Chromosome 15 SCAF14542, whole genome sho... 238 2e-61 tr|B5X451|B5X451_SALSA Nucleolar GTP-binding protein 1 OS=Salmo ... 237 4e-61 tr|B4MJN7|B4MJN7_DROWI GK20864 OS=Drosophila willistoni GN=GK208... 237 4e-61 tr|B4LN40|B4LN40_DROVI GJ21086 OS=Drosophila virilis GN=GJ21086 ... 237 4e-61 tr|B4J4E9|B4J4E9_DROGR GH21544 OS=Drosophila grimshawi GN=GH2154... 237 4e-61 tr|Q28ZG8|Q28ZG8_DROPS GA21331 OS=Drosophila pseudoobscura pseud... 236 6e-61 tr|B4GHS6|B4GHS6_DROPE GL16889 OS=Drosophila persimilis GN=GL168... 236 6e-61 tr|B0WCP7|B0WCP7_CULQU Nucleolar GTP-binding protein OS=Culex qu... 236 6e-61 tr|Q7ZVR0|Q7ZVR0_DANRE GTP binding protein 4 OS=Danio rerio GN=g... 236 8e-61 tr|Q6NWG5|Q6NWG5_DANRE GTP binding protein 4 OS=Danio rerio GN=g... 236 8e-61 tr|Q6DRI5|Q6DRI5_DANRE GTP binding protein NGB OS=Danio rerio GN... 236 8e-61 tr|Q64G16|Q64G16_OXYSC G protein-binding protein (Fragment) OS=O... 236 8e-61
>tr|A7NZR5|A7NZR5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024613001 PE=4 SV=1 Length = 618
Score = 268 bits (684), Expect = 2e-70 Identities = 125/149 (83%), Positives = 143/149 (95%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP+ K+F+DIILSRTQRQTPTVVHKGY+I+RLRQFYMRKVK+TQQNFHE Sbjct: 1 MVQYNFKKITVVPNGKEFIDIILSRTQRQTPTVVHKGYSISRLRQFYMRKVKYTQQNFHE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ I+E+FPRLDDIHPFYGDLL+VLY++DHYKLALGQINTARNLISK+ KDYVRLLKYG Sbjct: 61 KLSTIIEEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVRLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVAALGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKSLKVAALGRMCTVIKRIAPSLA 149
>tr|A7QNT3|A7QNT3_VITVI Chromosome undetermined scaffold_134, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002660001 PE=4 SV=1 Length = 643
Score = 266 bits (681), Expect = 4e-70 Identities = 124/149 (83%), Positives = 143/149 (95%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP+ K+F+DIILSRTQRQTPTVVHKGY+I+RLRQFYMRKVK+TQQNFHE Sbjct: 1 MVQYNFKKITVVPNGKEFIDIILSRTQRQTPTVVHKGYSISRLRQFYMRKVKYTQQNFHE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ I+E+FPRLDDIHPFYGDLL+VLY++DHYKLALGQINTARNLISK+ KDYV+LLKYG Sbjct: 61 KLSTIIEEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVAALGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKSLKVAALGRMCTVIKRIAPSLA 149
>tr|A9S563|A9S563_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181401 PE=4 SV=1 Length = 681
Score = 266 bits (680), Expect = 6e-70 Identities = 125/149 (83%), Positives = 139/149 (93%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MVLYNFKQIT+VPS K+FVDIILSRTQRQTPTVVHKGYAI R+RQFYMRKVK+TQ NFHE Sbjct: 1 MVLYNFKQITVVPSGKEFVDIILSRTQRQTPTVVHKGYAINRIRQFYMRKVKYTQTNFHE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 K++ I+EDFPRLDDIHPFYG+LLN LYD+DHYKLALGQ+NTARNLI K+ KDYVRLLKYG Sbjct: 61 KISTILEDFPRLDDIHPFYGELLNHLYDKDHYKLALGQLNTARNLIEKIAKDYVRLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LK AALGRMCT+MKR+ PSL+ Sbjct: 121 DSLYRCKNLKKAALGRMCTVMKRVSPSLA 149
>tr|A5BG44|A5BG44_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024726 PE=4 SV=1 Length = 674
Score = 265 bits (676), Expect = 2e-69 Identities = 123/149 (82%), Positives = 142/149 (95%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP+ K+F+DIILSRTQRQTPTVVHKGY+I+RLRQFYMRKVK+TQQNFHE Sbjct: 1 MVQYNFKKITVVPNGKEFIDIILSRTQRQTPTVVHKGYSISRLRQFYMRKVKYTQQNFHE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ I+E+FPRLDDIHPFYGDLL+VLY++DHYKLALGQINTARNLISK+ KDYV+LLKYG Sbjct: 61 KLSTIIEEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVA LGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKSLKVAXLGRMCTVIKRIAPSLA 149
>tr|Q69YA7|Q69YA7_ORYSJ Putative nucleolar GTP-binding protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0528E04.18 PE=4 SV=1 Length = 676
Score = 259 bits (662), Expect = 7e-68 Identities = 119/149 (79%), Positives = 141/149 (94%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP KDF+DIILSRTQRQTPTVVHKGY+I+R+RQFYMRKVK+TQ NF+E Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ +++DFPRLDDIHPFYGDLL+VLY++DHYKLALGQINTARN+I+K+ KDY+RLLKYG Sbjct: 61 KLSTVIDDFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVAALGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLA 149
>tr|Q8LIM1|Q8LIM1_ORYSJ Putative GTP binding protein OS=Oryza sativa subsp. japonica GN=OJ1567_G09.130 PE=4 SV=1 Length = 676
Score = 258 bits (658), Expect = 2e-67 Identities = 119/149 (79%), Positives = 140/149 (93%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP KDF+DIILSRTQRQTPTVVHKGYAI+R+RQFYMRKVK+TQ NF+E Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ +++DFPRLD IHPFYGDLL+VLY++DHYKLALGQINTARN+I+K+ KDY+RLLKYG Sbjct: 61 KLSTVIDDFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVAALGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLA 149
>tr|A3BFW1|A3BFW1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021933 PE=4 SV=1 Length = 591
Score = 258 bits (658), Expect = 2e-67 Identities = 119/149 (79%), Positives = 140/149 (93%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 MV YNFK+IT+VP KDF+DIILSRTQRQTPTVVHKGYAI+R+RQFYMRKVK+TQ NF+E Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL+ +++DFPRLD IHPFYGDLL+VLY++DHYKLALGQINTARN+I+K+ KDY+RLLKYG Sbjct: 61 KLSTVIDDFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSLS 560 DSLYRCK LKVAALGRMCT++KRI PSL+ Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLA 149
>tr|A7RHM9|A7RHM9_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g228024 PE=4 SV=1 Length = 616
Score = 244 bits (624), Expect = 2e-63 Identities = 110/148 (74%), Positives = 135/148 (91%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 M YNFK+IT+VP++KDF+DI+LS+TQR+TPTVVHKGY I+R+RQFY+RK+K+TQQN+H+ Sbjct: 1 MAHYNFKKITVVPTAKDFIDIVLSKTQRKTPTVVHKGYKISRIRQFYLRKIKYTQQNYHD 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 KL++I+ DFPRL+D+HPFY DL+NVLYD+DHYKLALGQINTARNLI V KDY RL+KYG Sbjct: 61 KLSQIITDFPRLEDVHPFYADLMNVLYDKDHYKLALGQINTARNLIDNVAKDYARLMKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSL 557 DSL+RCK+LK AALGRMCTIMKR SL Sbjct: 121 DSLFRCKQLKRAALGRMCTIMKRQNQSL 148
>tr|Q5ZM18|Q5ZM18_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_3g12 PE=2 SV=1 Length = 631
Score = 241 bits (614), Expect = 3e-62 Identities = 111/148 (75%), Positives = 133/148 (89%) Frame = +3
Query: 114 MVLYNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHE 293 M LYNFK+IT+VPS+KDF+D+ LS+TQR+TPTV+HK Y I R+RQFYMRKVK+TQQN+H+ Sbjct: 1 MALYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRQFYMRKVKYTQQNYHD 60
Query: 294 KLTKIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYG 473 +LT+I+ DFP+LDDIHPFY DL+NVLYD+DHYKLALGQIN A+NLI V KDYVRL+KYG Sbjct: 61 RLTQILTDFPKLDDIHPFYADLMNVLYDKDHYKLALGQINIAKNLIDNVAKDYVRLMKYG 120
Query: 474 DSLYRCKKLKVAALGRMCTIMKRIGPSL 557 DSLYRCK+LK AALGRMCTI+KR SL Sbjct: 121 DSLYRCKQLKRAALGRMCTIIKRQKQSL 148
>tr|A4RTG3|A4RTG3_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_35887 PE=4 SV=1 Length = 664
Score = 240 bits (613), Expect = 3e-62 Identities = 110/146 (75%), Positives = 134/146 (91%) Frame = +3
Query: 123 YNFKQITIVPSSKDFVDIILSRTQRQTPTVVHKGYAIARLRQFYMRKVKFTQQNFHEKLT 302 YNFK+I VP++ DF+D++LSRTQRQTPTVVH GYAIAR+RQFYMRKVK+TQQ+++EKL+ Sbjct: 3 YNFKKIASVPAASDFIDVVLSRTQRQTPTVVHAGYAIARIRQFYMRKVKYTQQSWNEKLS 62
Query: 303 KIVEDFPRLDDIHPFYGDLLNVLYDRDHYKLALGQINTARNLISKVCKDYVRLLKYGDSL 482 +I+EDFPR+DD+HPFY DLLNVLYD+DHYKLALGQ+NTAR +I K+ KDYV+LLKYGDSL Sbjct: 63 RILEDFPRVDDVHPFYSDLLNVLYDKDHYKLALGQLNTARAMIDKIAKDYVKLLKYGDSL 122
Query: 483 YRCKKLKVAALGRMCTIMKRIGPSLS 560 YRCK+LK AALGRMCTIMK+ SL+ Sbjct: 123 YRCKQLKRAALGRMCTIMKKHAASLA 148
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