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NBDC - LSDB Archive
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DK956240
Clone id TST39A01NGRL0025_D15
Library
Length 626
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_D15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCACACTCCCCTTGCCCTTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGC
CGTGAAAGGGAGGTCGCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTC
TCAACAACTACCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGC
GGGAGGGCTCTCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACC
GTTCGCGCAACCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAG
CAAAGTCTAAGCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGT
TTGATGGACCCAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAA
ATCATCAATGGAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTT
GGCAAGGCTGGTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATC
CCACCTCTAGGAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATG
GCCCTCATGGGCTTTGCTGAGCACCG
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 132
Score (bit) 230.0
E-value 5.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956240|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_D15, 5'
         (626 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   230   5e-60
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   228   2e-59
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    97   7e-20
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    94   4e-19
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    76   2e-13
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    74   5e-13
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    72   3e-12
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    64   5e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    64   5e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   6e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    61   4e-09
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    61   5e-09
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    61   5e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    60   7e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   9e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    60   1e-08
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    59   2e-08
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    59   3e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   3e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   3e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   3e-08
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...    59   3e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  230 bits (586), Expect = 5e-60
 Identities = 110/132 (83%), Positives = 116/132 (87%), Gaps = 2/132 (1%)
 Frame = +1

Query: 235 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 408
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 409 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 588
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 589 VLEMALMGFAEH 624
           VLEMALMGFAEH
Sbjct: 157 VLEMALMGFAEH 168


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  228 bits (581), Expect = 2e-59
 Identities = 110/131 (83%), Positives = 115/131 (87%), Gaps = 3/131 (2%)
 Frame = +1

Query: 241 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 411
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 412 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 591
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 592 LEMALMGFAEH 624
           LEMALMGFAEH
Sbjct: 160 LEMALMGFAEH 170


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 97.1 bits (240), Expect = 7e-20
 Identities = 61/155 (39%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
 Frame = +1

Query: 160 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 339
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 340 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 516
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 517 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAE 621
            W+        G   Y+ D  TLF++E+ L+G+AE
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAE 165



 Score = 33.9 bits (76), Expect = 0.70
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +1

Query: 307 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 462
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 94.4 bits (233), Expect = 4e-19
 Identities = 61/155 (39%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
 Frame = +1

Query: 160 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 339
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 340 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 516
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 517 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAE 621
            W+        G   Y+ D  TLFV+E+ L+G+AE
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAE 165



 Score = 33.9 bits (76), Expect = 0.70
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +1

Query: 307 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 462
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
 Frame = +1

Query: 163 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 342
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 343 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 519
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 520 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAE 621
           W+        G   Y+A   TLFV+E  L  + E
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVE 153


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = +1

Query: 250 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 426
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 427 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 606
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 607 MGFAE 621
             + E
Sbjct: 150 FHYVE 154


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +1

Query: 286 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 462
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 463 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMA 603
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS 128


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
 Frame = +1

Query: 295 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAP 471
           S+Q+ SYL G  PGD+G+D  GL  DPE    F     L   E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 472 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAE 621
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF E
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVE 170


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
 Frame = +1

Query: 295 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAP 471
           S+Q+ SYL G  PGD+G+D  GL  DPE    F     L   E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 472 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAE 621
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF E
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVE 170


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score = 63.9 bits (154), Expect = 6e-10
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
 Frame = +1

Query: 244 RATADKPVK-VDRQLWFA----------SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGG 387
           RAT  + VK   + +W+           S+Q+ SYL G  PGD+G+D  GL  DPE    
Sbjct: 34  RATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET--- 90

Query: 388 FIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTG-VIPPLGTYNY 564
           F     L   E+I+ R+AMLGA+G + PEIL K G+   E   VWF+ G  I   G  +Y
Sbjct: 91  FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGE--AVWFKAGSQIFSEGGLDY 145

Query: 565 WADP--------YTLFVLEMALMGFAE 621
             +P          ++  ++ LMGF E
Sbjct: 146 LGNPNLIHAQSILAIWAAQVVLMGFVE 172
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 157
Score (bit) 241.0
E-value 3.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956240|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_D15, 5'
         (626 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   241   3e-62
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   238   3e-61
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   233   5e-60
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   233   5e-60
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   231   3e-59
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   230   5e-59
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   229   1e-58
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   224   4e-57
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   221   3e-56
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   221   3e-56
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   218   2e-55
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   218   3e-55
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   218   3e-55
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   214   4e-54
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   208   2e-52
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   208   2e-52
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   208   2e-52
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   207   3e-52
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   185   2e-45
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   184   4e-45
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   181   4e-44
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   181   4e-44
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   175   2e-42
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   175   2e-42
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   171   4e-41
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   169   1e-40
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   169   1e-40
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   167   4e-40
tr|A4QPK1|A4QPK1_ACEAT Chloroplast light-harvesting complex I pr...   166   1e-39
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   166   1e-39

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  241 bits (614), Expect = 3e-62
 Identities = 121/157 (77%), Positives = 131/157 (83%), Gaps = 3/157 (1%)
 Frame = +1

Query: 163 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 333
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 334 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 513
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 514 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEH 624
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEH
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEH 181


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  238 bits (606), Expect = 3e-61
 Identities = 116/133 (87%), Positives = 122/133 (91%), Gaps = 3/133 (2%)
 Frame = +1

Query: 235 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 405
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 406 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 585
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 586 FVLEMALMGFAEH 624
           FVLEMALMGFAEH
Sbjct: 171 FVLEMALMGFAEH 183


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  233 bits (595), Expect = 5e-60
 Identities = 113/131 (86%), Positives = 117/131 (89%), Gaps = 1/131 (0%)
 Frame = +1

Query: 235 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 411
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 412 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 591
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 592 LEMALMGFAEH 624
            EMALMGFAEH
Sbjct: 159 FEMALMGFAEH 169


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  233 bits (595), Expect = 5e-60
 Identities = 113/131 (86%), Positives = 117/131 (89%), Gaps = 1/131 (0%)
 Frame = +1

Query: 235 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 411
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 412 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 591
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 592 LEMALMGFAEH 624
            EMALMGFAEH
Sbjct: 159 FEMALMGFAEH 169


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  231 bits (589), Expect = 3e-59
 Identities = 115/156 (73%), Positives = 123/156 (78%), Gaps = 3/156 (1%)
 Frame = +1

Query: 166 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 336
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 337 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 516
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 517 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEH 624
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEH
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEH 170


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  230 bits (587), Expect = 5e-59
 Identities = 115/156 (73%), Positives = 123/156 (78%), Gaps = 3/156 (1%)
 Frame = +1

Query: 166 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 336
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 337 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 516
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 517 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEH 624
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEH
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEH 170


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  229 bits (584), Expect = 1e-58
 Identities = 113/155 (72%), Positives = 122/155 (78%), Gaps = 2/155 (1%)
 Frame = +1

Query: 166 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 339
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 340 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 519
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 520 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEH 624
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEH
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEH 168


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  224 bits (570), Expect = 4e-57
 Identities = 105/132 (79%), Positives = 113/132 (85%), Gaps = 2/132 (1%)
 Frame = +1

Query: 235 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 408
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 409 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 588
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 589 VLEMALMGFAEH 624
           V  MALMGFAEH
Sbjct: 151 VFNMALMGFAEH 162


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  221 bits (563), Expect = 3e-56
 Identities = 107/132 (81%), Positives = 113/132 (85%), Gaps = 2/132 (1%)
 Frame = +1

Query: 235 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 408
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 409 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 588
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 589 VLEMALMGFAEH 624
           VLEMALMGFAEH
Sbjct: 157 VLEMALMGFAEH 168


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  221 bits (563), Expect = 3e-56
 Identities = 107/132 (81%), Positives = 113/132 (85%), Gaps = 2/132 (1%)
 Frame = +1

Query: 235 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 408
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 409 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 588
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 589 VLEMALMGFAEH 624
           VLEMALMGFAEH
Sbjct: 157 VLEMALMGFAEH 168