DK956241 |
Clone id |
TST39A01NGRL0025_D16 |
Library |
TST39 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_D16. 5' end sequence. |
Accession |
DK956241 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL42Contig1 |
Sequence |
CTTGTAGATCACTACAGAATTTCCGTATCGACGCGAGGTTTTGGGACACAGCAGATCTCT CTCGTTCTACTTCAGATCTGTGTCCAGGAGCTAAGCGAGCTCAGGATTGATGGAGAATAT TTATTCTTTCTGGAGTCTAAATGACAATAATCGGCGCTCTCCCACTGAGATGCAAGAGGA TCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGCTTTTGCGGATCAGATGAGGCTGAAGTT TGATAGGTCTAGATCTGATGCGAAGGTTGTGGCCCCTCATGAGAAGAACATTAAACAAGC AAAGGGACGATCCAAGGGCAGAGCTGAAGACATGCTGAAGGGGGAAGGTTTCAACCAGAA GTTTTCGGATGGGGATTTGAGATATGGAGATTTGGGTCAGAAGCTTGGAGCAGGTAACAT GTCAACATCACAGATTGTTGGCAGTGCAGATAAACGATTCAAGTCTCTTCCGCCTGCTGA AACACTTCCTAGACACGAAACTTTGGGTGGCTACATATTTGTCTGCAACAATGATACCAT GGCTGAGGACTTGAAGCGGCAATTATTTGGTTTGCCCCAAAGGTATCGTGATTCTGTGCG AGCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
65 |
Score (bit) |
100.0 |
E-value |
7.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
186 |
Score (bit) |
132.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956241|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_D16, 5' (605 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 132 2e-29 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 119 1e-25 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 115 2e-24 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 114 6e-24 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 111 3e-23 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 106 9e-22 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 106 9e-22 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 102 1e-20 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 102 2e-20 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 101 3e-20 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 100 7e-20 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 100 9e-20 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 99 1e-19 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 99 3e-19 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 99 3e-19 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 98 3e-19 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 98 4e-19 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 97 7e-19 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 97 7e-19 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 94 5e-18 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 93 1e-17 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 93 1e-17 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genom... 90 9e-17 tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis... 90 9e-17 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 89 2e-16 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 88 3e-16
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 132 bits (332), Expect = 2e-29 Identities = 82/186 (44%), Positives = 101/186 (54%), Gaps = 21/186 (11%) Frame = +2
Query: 110 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 289 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 290 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 412 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 413 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRY 586 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRY Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRY 176
Query: 587 RDSVRA 604 RDSVRA Sbjct: 177 RDSVRA 182
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 119 bits (299), Expect = 1e-25 Identities = 78/179 (43%), Positives = 106/179 (59%), Gaps = 14/179 (7%) Frame = +2
Query: 110 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 289 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 290 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 442 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 443 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVRA 604 S +KRFK+LP +E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRYRDSVRA Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVRA 173
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 115 bits (288), Expect = 2e-24 Identities = 81/204 (39%), Positives = 101/204 (49%), Gaps = 39/204 (19%) Frame = +2
Query: 110 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 289 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 290 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 427 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 428 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 532 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 533 DTMAEDLKRQLFGLPQRYRDSVRA 604 DTM EDLKRQLFGLP RYRDSVRA Sbjct: 177 DTMQEDLKRQLFGLPPRYRDSVRA 200
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 114 bits (284), Expect = 6e-24 Identities = 84/217 (38%), Positives = 104/217 (47%), Gaps = 52/217 (23%) Frame = +2
Query: 110 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 289 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 290 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 388 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 389 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 493 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 494 HETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVRA 604 +E LGGYIFVCNNDTM EDLKRQLFGLP RYRDSVRA Sbjct: 167 NEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRA 203
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 111 bits (278), Expect = 3e-23 Identities = 76/202 (37%), Positives = 98/202 (48%), Gaps = 37/202 (18%) Frame = +2
Query: 110 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 277 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 278 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 358 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 359 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 538 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
Query: 539 MAEDLKRQLFGLPQRYRDSVRA 604 M EDLKR LFGLP RYRDSVRA Sbjct: 177 MQEDLKRLLFGLPPRYRDSVRA 198
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 106 bits (265), Expect = 9e-22 Identities = 74/204 (36%), Positives = 94/204 (46%), Gaps = 44/204 (21%) Frame = +2
Query: 125 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 271 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 272 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 427 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 428 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 532 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 533 DTMAEDLKRQLFGLPQRYRDSVRA 604 DTM ED+KR LFGLP RYRDSVRA Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSVRA 195
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 106 bits (265), Expect = 9e-22 Identities = 74/204 (36%), Positives = 94/204 (46%), Gaps = 44/204 (21%) Frame = +2
Query: 125 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 271 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 272 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 427 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 428 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 532 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 533 DTMAEDLKRQLFGLPQRYRDSVRA 604 DTM ED+KR LFGLP RYRDSVRA Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSVRA 195
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 102 bits (255), Expect = 1e-20 Identities = 49/57 (85%), Positives = 51/57 (89%) Frame = +2
Query: 431 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSVR 601 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDTM EDLKRQLFGLPQRYRDSVR Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVR 68
>tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191832 PE=4 SV=1 Length = 177
Score = 102 bits (254), Expect = 2e-20 Identities = 52/73 (71%), Positives = 56/73 (76%), Gaps = 1/73 (1%) Frame = +2
Query: 386 GDLGQKLGAGNMSTS-QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQ 562 G K G N +T Q+ S +KRFKSLP AE LPR+ TLGGYIFVCNNDTM EDLKRQ Sbjct: 3 GPTAPKTGVSNGNTQFQVTVSHEKRFKSLPSAEVLPRNVTLGGYIFVCNNDTMQEDLKRQ 62
Query: 563 LFGLPQRYRDSVR 601 LFGLPQRYRDSVR Sbjct: 63 LFGLPQRYRDSVR 75
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 101 bits (252), Expect = 3e-20 Identities = 73/200 (36%), Positives = 94/200 (47%), Gaps = 40/200 (20%) Frame = +2
Query: 125 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 289 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 290 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 388 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 389 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDTMA 544 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQ 181
Query: 545 EDLKRQLFGLPQRYRDSVRA 604 EDLKRQLFGLP RYRDSVRA Sbjct: 182 EDLKRQLFGLPARYRDSVRA 201
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