DK956254
Clone id TST39A01NGRL0025_E05
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_E05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGACGTGCAGAAGCGGAGCTGGCTACCGCCAGCTGTCGATCCATGCCTGCAAATGATCTT
TAATGGGAACAATTTCTGCTCTCTCGTTCATCGGGCCTTCCTCTTCCACCCGTTGGACTG
GGCATTCTTTCCTGCAGCCTTCTTTTTCGCCATAGCTTTTAGAATAGCATTCAGATCTCT
AGACTTCTGTTGTTGTGGGCTTCGCGTTGATTGCATTGAGCTCCTTGATTTTTCGCTGGA
GCTCTCCCTCGTAGTCGGGGTTGCAATCGGGGTTTCGTTCTGTTGCCTTGCCATTCCAGA
TCGACCTGCCAGGGTGCAGTTCTCTGACTCTCGAGCTGCTGCTTGCGCCTGGAGATTCTC
ATCACTCTGTTCTTTTCTACAGCAAAAAATCCATTAACCTTGTCTGGAGATTTGCCTTAT
GTGGAGAATCACCCATACGTGACTGCTCCATAGCTCTGAAGTGAGAAGGTGCATGCGCAT
TGTGGTGTCATAGGTACTTCTCGCATCGAGGGCTGCTATGGGTACTGCTGTACTTCTGCC
GCATGACTGCTTGCGGAACACCAAAAGCAAGCATAAGGGCCATCTCTCTGAGGCAATTCT
TCACTCTGATAGAGCTTACCGAGCAAGAAGAGACACCCTTTCAAGCATCTGTCTTAAGTG
ATCCA
■■Homology search results ■■ -
sp_hit_id Q9I7U4
Definition sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster
Align length 44
Score (bit) 31.2
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956254|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_E05, 5'
(665 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 31 5.2
sp|Q8R368|DYXC1_MOUSE Dyslexia susceptibility 1 candidate gene 1... 30 8.8

>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1
SV=3
Length = 18141

Score = 31.2 bits (69), Expect = 5.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1

Query: 389 FFAVEKNRVMRISRRKQQLESQRTAPWQVDLEWQGNRTKPRLQP 258
F E +M +S R ++LE+QR Q + W+ + +P+LQP
Sbjct: 5137 FITTEDVNIMHVSER-EKLEAQRLIREQQAVNWRQQQQRPQLQP 5179


>sp|Q8R368|DYXC1_MOUSE Dyslexia susceptibility 1 candidate gene 1
protein homolog OS=Mus musculus GN=Dyx1c1 PE=2 SV=1
Length = 420

Score = 30.4 bits (67), Expect = 8.8
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2

Query: 250 EGELQRKIKELNAINAKPTTTEV*R-SECYSKSYGEKEGCRKECPVQRVEEE 98
E E ++KI+++ K T+E+ EC K+ G+K RKE P +R + E
Sbjct: 137 EEEERKKIEDMKENERKKATSELEAWKECQKKADGQKRVQRKEKPPERKQAE 188


tr_hit_id A4CUQ1
Definition tr|A4CUQ1|A4CUQ1_SYNPV Putative uncharacterized protein OS=Synechococcus sp. (strain WH7805)
Align length 98
Score (bit) 35.8
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956254|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_E05, 5'
(665 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4CUQ1|A4CUQ1_SYNPV Putative uncharacterized protein OS=Synec... 36 2.5

>tr|A4CUQ1|A4CUQ1_SYNPV Putative uncharacterized protein
OS=Synechococcus sp. (strain WH7805) GN=WH7805_02987
PE=4 SV=1
Length = 325

Score = 35.8 bits (81), Expect = 2.5
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = -2

Query: 307 RSIWNGKATERNPDCNPDYE-GELQRKIKELNAINAKPTTTEV*RSECYSKSYGEKE-GC 134
R+ W G+ + +P Y G+ QR + EL+AI + E ++SY E
Sbjct: 154 RAWWQGE--QEHPSLLFCYSFGKAQRLMAELHAIGVEDEVLLHGAVETVTRSYREAGIAM 211

Query: 133 RKECPVQRVEEEGPMNERAEIVPIKDHLQAWIDSWR*P 20
CPV + + P+ R + P H AW+ +R P
Sbjct: 212 TPSCPVSAISSKDPLAGRLILAPPSAHRSAWMRRFRSP 249