DK956270 |
Clone id |
TST39A01NGRL0025_E21 |
Library |
TST39 |
Length |
573 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_E21. 5' end sequence. |
Accession |
DK956270 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
GCTATTTGCAATGGCATTGCACTCCATGGAAGTGGACTGATTCCATATTGTGCCACATTC TTTGTGTTCACTGACTACATGCGAGGTGCCATGCGAATTTCTGCTCTTTCTGAGGCCGGA GTGATCTATGTTATGACACATGACTCTATCGGTTTGGGAGAAGATGGTCCAACCCATCAA CCCATAGAGCATCTGGCAAGCTTCAGAGCCATGCCCAATATTTTGATGTTGCGACCTGCT GATGGAAATGAGACTGCTGGTGCATACAAGGTGGCTGTGGAGAGTAGAAAACGGCCCTCA ATTCTTGCGCTCTCGCGCCAAAAGCTCCCCCATCTACCTGGGACATCTATTGAAGGAGTA GAGAAAGGAGGCTATACCATCAGTTGCAACGCTTCTGGAAACAAGCCTGACTTGATCCTC TTCGGAACAGGATCTGAACTAGAGATTGCCTACAAAGCAGCCGAAGTCATCAGGAAGGAG GGCAAAACTGTGAGAGTTGTCTCAATGGTATCATGGGAGTTGTTTGAAGAACAAAGTGCT GAATACAAAGAGAGTGTTATCCCTGCAGCCGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
191 |
Score (bit) |
344.0 |
E-value |
2.0e-94 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956270|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_E21, 5' (573 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 344 2e-94 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 333 5e-91 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 329 7e-90 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 323 4e-88 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 298 2e-80 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 297 2e-80 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 250 4e-66 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 201 2e-51 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 198 2e-50 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 192 8e-49 sp|O94039|TKT1_CANAL Transketolase 1 OS=Candida albicans GN=TKT1... 192 1e-48 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 192 1e-48 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 191 2e-48 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 191 2e-48 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 189 7e-48 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 189 7e-48 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 188 2e-47 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 187 3e-47 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 187 4e-47 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 187 4e-47 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 187 4e-47 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 186 6e-47 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 186 7e-47 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 185 1e-46 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 185 1e-46
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 344 bits (883), Expect = 2e-94 Identities = 171/191 (89%), Positives = 180/191 (94%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNGIALH G +PYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ Sbjct: 428 AICNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 487
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 PIEHL SFRAMPNILMLRPADGNETAGAYKVAV +RKRPSILALSRQKLPHLPGTSIEGV Sbjct: 488 PIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPHLPGTSIEGV 547
Query: 361 EKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSA 540 EKGGYTIS N++GNKPDLI+ GTGSELEIA KAA+ +RKEGKTVRVVS VSWELF+EQS Sbjct: 548 EKGGYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSD 607
Query: 541 EYKESVIPAAV 573 EYKESV+PAAV Sbjct: 608 EYKESVLPAAV 618
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 333 bits (853), Expect = 5e-91 Identities = 166/191 (86%), Positives = 176/191 (92%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNGIALH GLIPYCATFFVFTDYMR AMRISAL EA VIYVMTHDSIGLGEDGPTHQ Sbjct: 271 AICNGIALHSPGLIPYCATFFVFTDYMRAAMRISALCEARVIYVMTHDSIGLGEDGPTHQ 330
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 PIEHLASFRAMPNILMLRPADGNETAGAYKVAV++ KRPS+LALSRQKLP LPGTSIEGV Sbjct: 331 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVQNLKRPSVLALSRQKLPQLPGTSIEGV 390
Query: 361 EKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSA 540 EKGGY IS N+SGNKPD+IL GTGSELEIA KA EV+RKEGK VRVVS VSWELF+EQS Sbjct: 391 EKGGYVISDNSSGNKPDVILIGTGSELEIAAKAGEVLRKEGKGVRVVSFVSWELFDEQSK 450
Query: 541 EYKESVIPAAV 573 EYKESV+P++V Sbjct: 451 EYKESVLPSSV 461
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 329 bits (843), Expect = 7e-90 Identities = 164/191 (85%), Positives = 174/191 (91%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNGIALH GLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ Sbjct: 493 AICNGIALHSLGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 552
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 PIEHLASFRAMPNILM RPADGNETAGAYKVAV RK PSILALSRQKLP L GTSIEG Sbjct: 553 PIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSILALSRQKLPQLAGTSIEGA 612
Query: 361 EKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSA 540 KGGY +S N+SGNKPD+IL GTGSELEIA KAAE ++KEGKTVRVVS V WEL++EQSA Sbjct: 613 AKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVCWELYDEQSA 672
Query: 541 EYKESVIPAAV 573 EYKESV+P++V Sbjct: 673 EYKESVLPSSV 683
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 323 bits (828), Expect = 4e-88 Identities = 160/191 (83%), Positives = 174/191 (91%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNGI LH G +PYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ Sbjct: 493 AICNGICLHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 552
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 PIE L+ F AMPNILMLRPADGNETAG+YKVAVE+RK PSILALSR+KLP+LPGTSIEGV Sbjct: 553 PIEALSKFPAMPNILMLRPADGNETAGSYKVAVENRKTPSILALSRKKLPNLPGTSIEGV 612
Query: 361 EKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQSA 540 EKGGYTI+ N+SGNKPD+IL GTGSELEIA KA + +RKEGK VRVVS VSWELFE+QS Sbjct: 613 EKGGYTITDNSSGNKPDVILIGTGSELEIAAKAGDELRKEGKAVRVVSFVSWELFEKQSD 672
Query: 541 EYKESVIPAAV 573 EYKESV+P+ V Sbjct: 673 EYKESVLPSDV 683
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 298 bits (762), Expect = 2e-80 Identities = 146/192 (76%), Positives = 169/192 (88%), Gaps = 1/192 (0%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNG+ALH GL+P+ AT+FVFTDYMR A+RI+ALS+A V+Y+MTHDSIGLGEDGPTHQ Sbjct: 430 AICNGVALHSPGLVPFSATYFVFTDYMRAAIRIAALSKARVVYIMTHDSIGLGEDGPTHQ 489
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 P+EHLASFRAMPNIL+LRPADGNETAGAYKVAVE+ RPSIL+LSRQKLP LPGTS+EGV Sbjct: 490 PVEHLASFRAMPNILVLRPADGNETAGAYKVAVENAGRPSILSLSRQKLPQLPGTSVEGV 549
Query: 361 EKGGYTISCNA-SGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQS 537 +GGY IS N+ G KP++IL GTGSELEIA +A E +RKEGK VRVVS+VSWELF EQS Sbjct: 550 GRGGYVISDNSKDGEKPEVILMGTGSELEIAARAGEELRKEGKKVRVVSLVSWELFGEQS 609
Query: 538 AEYKESVIPAAV 573 EYKE V+P+ V Sbjct: 610 KEYKEMVLPSEV 621
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 297 bits (761), Expect = 2e-80 Identities = 144/193 (74%), Positives = 169/193 (87%), Gaps = 2/193 (1%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 +ICNG+ALH GL+PYCAT+FVFTDYMR AMRISALS+A V+Y+MTHDSIGLGEDGPTHQ Sbjct: 426 SICNGLALHSPGLLPYCATYFVFTDYMRAAMRISALSKARVLYIMTHDSIGLGEDGPTHQ 485
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGTSIEGV 360 P+EHLASFRAMPNIL LRPADGNETAGAY+ AV++ +RPSIL L+RQKLP LPGTSIEGV Sbjct: 486 PVEHLASFRAMPNILTLRPADGNETAGAYRAAVQNGERPSILVLARQKLPQLPGTSIEGV 545
Query: 361 EKGGYTISCNASG--NKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQ 534 KGGY IS N+ G +KPD+IL GTGSELEIA +A + +RKEGK VRVVS+V WELF EQ Sbjct: 546 SKGGYVISDNSRGGNSKPDVILIGTGSELEIAARAGDELRKEGKKVRVVSLVCWELFAEQ 605
Query: 535 SAEYKESVIPAAV 573 S +Y+E+V+P+ V Sbjct: 606 SEKYRETVLPSGV 618
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 250 bits (638), Expect = 4e-66 Identities = 125/193 (64%), Positives = 153/193 (79%), Gaps = 2/193 (1%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 AICNGIALHGSGLIPY ATF +F+DYMR +R+SALS+AG I+VMTHDSIG GEDGPTHQ Sbjct: 421 AICNGIALHGSGLIPYGATFLIFSDYMRAPIRLSALSQAGSIWVMTHDSIGQGEDGPTHQ 480
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKR--PSILALSRQKLPHLPGTSIE 354 PIE LAS RA+PN+ ++RPADGNET+GAYKVA+E K P++LA +RQ +P+L GTSI+ Sbjct: 481 PIETLASLRAIPNLTVIRPADGNETSGAYKVAIERAKNNAPTLLAFTRQNVPNLAGTSID 540
Query: 355 GVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEEQ 534 V KGGY + + PDLIL GTGSEL + AAE ++ EGK VRVVS+ +W+LF+ Q Sbjct: 541 DVAKGGYIVV--DTDGTPDLILIGTGSELSLCVTAAEKLKAEGKKVRVVSLAAWDLFDAQ 598
Query: 535 SAEYKESVIPAAV 573 A YKESV+P AV Sbjct: 599 DAAYKESVLPKAV 611
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 201 bits (511), Expect = 2e-51 Identities = 104/194 (53%), Positives = 138/194 (71%), Gaps = 3/194 (1%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 A NG+ALHG GL + ATFFVF+DY+R A+R++AL + VIYV THDSI +GEDGPTH+ Sbjct: 415 AAMNGMALHG-GLKVFGATFFVFSDYLRPAIRLAALMQLPVIYVFTHDSIAVGEDGPTHE 473
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHLPGT---SI 351 P+E LAS RAMP + ++RPADGNE+ A+K+A+ES+ +P+ L LSRQ LP L G + Sbjct: 474 PVEQLASLRAMPGLSVIRPADGNESVAAWKLALESKDQPTALVLSRQNLPTLEGAVDRAY 533
Query: 352 EGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEE 531 +GV KG Y ++ + DL+L +GSE+ +A A E + KEG VVSM SW+ FE Sbjct: 534 DGVSKGAYVLA--PANGSADLLLLASGSEVSLAVNAKEALEKEGIHAAVVSMPSWDRFEA 591
Query: 532 QSAEYKESVIPAAV 573 QSAEYKE V+P+ V Sbjct: 592 QSAEYKEEVLPSDV 605
>sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1 Length = 662
Score = 198 bits (503), Expect = 2e-50 Identities = 103/194 (53%), Positives = 140/194 (72%), Gaps = 3/194 (1%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 A NG+A HG GL PY ATFFVF+DY++ A+R+S++ ++ THDSI +GEDGPTH+ Sbjct: 415 AAVNGMAAHG-GLHPYGATFFVFSDYLKPALRLSSIMGLNATFIFTHDSIAVGEDGPTHE 473
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHL--PGTSI- 351 PIE LA RA+PN+ ++RPADGNET A++VA+ES P+ L L+RQ LP L P + Sbjct: 474 PIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESESTPTSLVLTRQNLPVLDVPEDVVE 533
Query: 352 EGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEE 531 EGV KG YT+ S P+ +L +GSE+ +A +AA+ + K+GK+VRVVSM +W FE+ Sbjct: 534 EGVRKGAYTV--YGSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQ 591
Query: 532 QSAEYKESVIPAAV 573 QS EYKESVIP++V Sbjct: 592 QSEEYKESVIPSSV 605
>sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1 Length = 662
Score = 198 bits (503), Expect = 2e-50 Identities = 103/194 (53%), Positives = 140/194 (72%), Gaps = 3/194 (1%) Frame = +1
Query: 1 AICNGIALHGSGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ 180 A NG+A HG GL PY ATFFVF+DY++ A+R+S++ ++ THDSI +GEDGPTH+ Sbjct: 415 AAVNGMAAHG-GLHPYGATFFVFSDYLKPALRLSSIMGLNATFIFTHDSIAVGEDGPTHE 473
Query: 181 PIEHLASFRAMPNILMLRPADGNETAGAYKVAVESRKRPSILALSRQKLPHL--PGTSI- 351 PIE LA RA+PN+ ++RPADGNET A++VA+ES P+ L L+RQ LP L P + Sbjct: 474 PIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESESTPTSLVLTRQNLPVLDVPEDVVE 533
Query: 352 EGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIRKEGKTVRVVSMVSWELFEE 531 EGV KG YT+ S P+ +L +GSE+ +A +AA+ + K+GK+VRVVSM +W FE+ Sbjct: 534 EGVRKGAYTV--YGSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQ 591
Query: 532 QSAEYKESVIPAAV 573 QS EYKESVIP++V Sbjct: 592 QSEEYKESVIPSSV 605
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZYI1 |
Definition |
tr|B7ZYI1|B7ZYI1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
191 |
Score (bit) |
343.0 |
E-value |
3.0e-93 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |