DK956282 [AcEST]

DK956282
Clone id	TST39A01NGRL0025_F09
Library	TST39
Length	583
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_F09. 5' end sequence.
Accession	DK956282
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL876Contig1
Sequence	CCCGAAGAAACTCCTGAAGATTCTAGTGTTGTTGCAGGTTTTAAAACTAATCGCAGCCAG CCAAGTTAAGTCCTTACCAAGGATCAGCTAACAACTACATGCTTTCCTGATGTGGGAAGA GCCACTTGCAGCATTAAATCTCGGATGCTGAAAGTCATTGCTAACCAGCTGGATGCAAAG AGCTTTCGAAGGTGGATAGCTCAGTGTGTATCAGGTTGAAGAGGGATTGCTGGATTTCTT ATGCAACTGTCTACACAAAGAGGAAGTTGTAGAGCATGCTCCACTTACGTCACAGTACAT GCTGCTGATCCTCTGAGGCTTGAAACTCAAGTGACTAGACAGGCCTGGATTTGTTGAGAG AGGGCTTTCATGGCTCCAATGCTATAGCGCCTGTGCCCAATGCAAAAAAAGCAGTGGCCT TTCTCTTTACCCGATATTTGTGGGGGGTTACTTAGGCTGCAAGGGTGGAGATGGATTTTA CCACACTTTTTAACACAAGGTTACATATACACACATCACCTTGAGAAGTTTTAATGATTT GGGCAACATTGCCCGCCCAGCCCAGATGGGTATATTTGTAAAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6DFR1
Definition	sp\|Q6DFR1\|S22AF_XENTR Solute carrier family 22 member 15 OS=Xenopus tropicalis
Align length	82
Score (bit)	30.8
E-value	5.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK956282\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_F09, 5' (583 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6DFR1\|S22AF_XENTR Solute carrier family 22 member 15 OS=Xeno... 31 5.2 >sp\|Q6DFR1\|S22AF_XENTR Solute carrier family 22 member 15 OS=Xenopus tropicalis GN=slc22a15 PE=2 SV=2 Length = 534 Score = 30.8 bits (68), Expect = 5.2 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +1 Query: 85 QLTTTCFPDVGRATCSIKSRMLKVIANQLDAKSFRRW-IAQCVSG*RGI-AGFLMQLSTQ 258 +L TC ++G CS+ SR+ +IA + A F W + V G G+ AG L L + Sbjct: 413 ELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRFAHWALPFIVFGAAGVSAGLLSLLLPE 472 Query: 259 RGSCRACSTYVTVHAADPLRLE 324 S T + A RLE Sbjct: 473 TLSAPLPETLADLRGAPYRRLE 494
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK956282\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_F09, 5' (583 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****