DK956318 |
Clone id |
TST39A01NGRL0025_G21 |
Library |
TST39 |
Length |
459 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_G21. 5' end sequence. |
Accession |
DK956318 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL182Contig1 |
Sequence |
TCTGGGTGCTGCTGCTGCCAACCAGCGCCCATGGTGAACGTTCCAAAGACGAAGTAATGT CCTTTTGCAAGGGCTAGGACTGCAAGAAGCACACTTTGCATAAGTGTGACTCAATACATG AAGGGCAAGGACAGTCTCTATGTGCTAGGAAAGAGGCGTTATGACTGGACGTCCTTTTTC CACCGTGGACAAACAAAGCCGGTCTTCCACAAGAAGGCTAAGACTACAAAGAAAATTGTG TTAAGGTTGCAATGTCAGAGTTGCAAGCATGTAACTCAGCATCCAATCAAGCGATGCAAG CACTTTGAGATTGGTGGTGACAAGAAGCGCAAGGGTGCCATGTACTAGGTCAATTTTTGC AGCATCATGATGAATCGAAGAGTTTTTGCTCAGACCTTTGCACTGTTTTAAGTATTAAAT TGAACTGAATTTTGTGACAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96499 |
Definition |
sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirsutum |
Align length |
102 |
Score (bit) |
143.0 |
E-value |
2.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST20 |
Definition |
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
102 |
Score (bit) |
149.0 |
E-value |
9.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956318|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_G21, 5' (423 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella paten... 149 9e-35 tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella paten... 147 2e-34 tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella paten... 147 3e-34 tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 145 1e-33 tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea... 142 6e-33 tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Popul... 142 6e-33 tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa ... 142 8e-33 tr|B3TLV9|B3TLV9_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 142 1e-32 tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genom... 142 1e-32 tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome ... 141 1e-32 tr|A7P2V5|A7P2V5_VITVI Chromosome chr1 scaffold_5, whole genome ... 141 1e-32 tr|B3TLU1|B3TLU1_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 141 2e-32 tr|Q8H5N0|Q8H5N0_ORYSJ Os07g0450000 protein OS=Oryza sativa subs... 140 2e-32 tr|B6TXV2|B6TXV2_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 140 2e-32 tr|B3TLU0|B3TLU0_ELAGV 60S ribosomal protein L44 OS=Elaeis guine... 140 2e-32 tr|A6N0K7|A6N0K7_ORYSI Putative uncharacterized protein OS=Oryza... 140 2e-32 tr|Q0D5Z3|Q0D5Z3_ORYSJ Os07g0523100 protein OS=Oryza sativa subs... 139 9e-32 tr|B7FGY8|B7FGY8_MEDTR Putative uncharacterized protein OS=Medic... 138 1e-31 tr|A9P9G6|A9P9G6_POPTR Putative uncharacterized protein OS=Popul... 138 1e-31 tr|A9NQ93|A9NQ93_PICSI Putative uncharacterized protein OS=Picea... 138 2e-31 tr|Q6RI22|Q6RI22_9ASPA 60S ribosomal protein L44 OS=Phalaenopsis... 137 2e-31 tr|Q94ER6|Q94ER6_BRARP 60S ribosomal protein L144 (Fragment) OS=... 137 3e-31 tr|B6SIY6|B6SIY6_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 136 4e-31 tr|B8LRK8|B8LRK8_PICSI Putative uncharacterized protein OS=Picea... 135 1e-30 tr|B6SHJ5|B6SHJ5_MAIZE 60S ribosomal protein L44 OS=Zea mays PE=... 135 1e-30 tr|Q2V9C3|Q2V9C3_SOLTU Ribosomal protein L41-like OS=Solanum tub... 133 5e-30 tr|Q0D5Z2|Q0D5Z2_ORYSJ Os07g0523300 protein (Fragment) OS=Oryza ... 131 2e-29 tr|Q6B8B7|Q6B8B7_9ACAR Ribosomal protein L44 OS=Ixodes pacificus... 128 1e-28 tr|Q4PM81|Q4PM81_IXOSC 60S ribosomal protein L44, putative OS=Ix... 128 1e-28 tr|A6N9T3|A6N9T3_ORNPR 60S ribosomal protein L44 OS=Ornithodoros... 128 1e-28
>tr|A9ST20|A9ST20_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106959 PE=3 SV=1 Length = 105
Score = 149 bits (375), Expect = 9e-35 Identities = 75/102 (73%), Positives = 79/102 (77%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK F + + VTQY KGKDSLYV GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KSFCPGKACKKHTLHKVTQYKKGKDSLYVQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RD45|A9RD45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109414 PE=3 SV=1 Length = 105
Score = 147 bits (372), Expect = 2e-34 Identities = 74/102 (72%), Positives = 79/102 (77%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK F ++ + VTQY KGKDSLY GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KSFCPGKSCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RQN3|A9RQN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177351 PE=3 SV=1 Length = 105
Score = 147 bits (371), Expect = 3e-34 Identities = 74/102 (72%), Positives = 78/102 (76%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK F + + VTQY KGKDSLY GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|A9RFG1|A9RFG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129054 PE=3 SV=1 Length = 105
Score = 145 bits (366), Expect = 1e-33 Identities = 73/101 (72%), Positives = 77/101 (76%) Frame = +1
Query: 19 VNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFHK 198 VNVPKTK F + + VTQY KGKDSLY GKRRYD + GQTKPVFHK Sbjct: 2 VNVPKTK-KSFCPGKACKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 199 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KAKTTKKIVLRLQCQ+CKHVTQHPIKRCKHFEIGGDKK KG Sbjct: 61 KAKTTKKIVLRLQCQACKHVTQHPIKRCKHFEIGGDKKGKG 101
>tr|B8LKF1|B8LKF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 105
Score = 142 bits (359), Expect = 6e-33 Identities = 72/102 (70%), Positives = 78/102 (76%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK F + + + VTQY KGKDSL V GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KTFCKNKACKKHTLHKVTQYKKGKDSLAVQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>tr|A9PD13|A9PD13_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=3 SV=1 Length = 105
Score = 142 bits (359), Expect = 6e-33 Identities = 72/102 (70%), Positives = 78/102 (76%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK + + + + VTQY KGKDSL GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVLRLQCQSCKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKG 101
>tr|Q00508|Q00508_CANMA Ribosomal protein L41 OS=Candida maltosa PE=3 SV=1 Length = 105
Score = 142 bits (358), Expect = 8e-33 Identities = 71/102 (69%), Positives = 78/102 (76%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK + +++ + VTQY KGKDSL GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 101
>tr|B3TLV9|B3TLV9_ELAGV 60S ribosomal protein L44 OS=Elaeis guineensis var. tenera PE=4 SV=1 Length = 105
Score = 142 bits (357), Expect = 1e-32 Identities = 71/102 (69%), Positives = 78/102 (76%) Frame = +1
Query: 16 MVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFH 195 MVNVPKTK + +++ R VTQY KGKDSL GKRRYD + GQTKPVFH Sbjct: 1 MVNVPKTK-KTYCKSKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFH 59
Query: 196 KKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KKAKTTKKIVL+LQCQSCKH +QHPIKRCKHFEIGGDKK KG Sbjct: 60 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>tr|A7Q2A2|A7Q2A2_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028799001 PE=3 SV=1 Length = 115
Score = 142 bits (357), Expect = 1e-32 Identities = 72/105 (68%), Positives = 78/105 (74%) Frame = +1
Query: 7 PAPMVNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKP 186 P VNVPKTK + +++ R VTQY KGKDSL GKRRYD + GQTKP Sbjct: 8 PQFSVNVPKTK-KTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKP 66
Query: 187 VFHKKAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 VFHKKAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 67 VFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 111
>tr|A7P2V6|A7P2V6_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030200001 PE=3 SV=1 Length = 109
Score = 141 bits (356), Expect = 1e-32 Identities = 71/101 (70%), Positives = 77/101 (76%) Frame = +1
Query: 19 VNVPKTK*CPFARARTARSTLCISVTQYMKGKDSLYVLGKRRYDWTSFFHRGQTKPVFHK 198 VNVPKTK + +++ R VTQY KGKDSL GKRRYD + GQTKPVFHK Sbjct: 6 VNVPKTK-KTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 64
Query: 199 KAKTTKKIVLRLQCQSCKHVTQHPIKRCKHFEIGGDKKRKG 321 KAKTTKKIVLRLQCQ CKHV+QHPIKRCKHFEIGGDKK KG Sbjct: 65 KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 105
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