DK956330 |
Clone id |
TST39A01NGRL0025_H09 |
Library |
TST39 |
Length |
564 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_H09. 5' end sequence. |
Accession |
DK956330 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL464Contig1 |
Sequence |
CGCATGGCGGATCGAGCTTGTGTGCAACGCCTACAGAAGGAATTTCGAGCTCTATGCAAG GAGCCCGTTCCTCATGTAGTTGCCAAACCATCACCAAGCAACATCTTGGAATGGCATTAT GTCCTGGAGGGCAGTGAGGGAACCCCTTTTGCAGGTGGTGTGTATCATGGCAAACTCAAA TTTCCAGCTGATTATCCCTATAAGCCACCAGGCATCAGCATGCTTACTCCTAATGGTCGC TTTGCCACTCAGAAACGACTTTGCATGTCCATGAGTGACTTTCACCCAGAGACTTGGAAT CCGATGTGGTCAGTCTCAAGCATTCTTACAGGATTGCTATCTTTTATGATGGAGAAGGCT CCCACAACTGGAAGTGTCTCCAGCACTGACGAGGAGAAGCATCGCTTTGCACAAGCATCA CTTGCTTTTAATTGTAAGAGCCCAATTTTTCGCAAAATGTTTCCTGAATATGTAGAGAAG TATACAGAACTGCTGAAGGGCAGCTCAGGCGGAAATTGAACAAGCTCAACATAAGTGAAG TGTTGAAGGCACCACTTTCTCGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SHI7 |
Definition |
sp|Q9SHI7|UBC34_ARATH Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
282.0 |
E-value |
7.0e-76 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TXY4 |
Definition |
tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
299.0 |
E-value |
6.0e-80 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956330|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_H09, 5' (564 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella paten... 299 6e-80 tr|O65079|O65079_PICMA Probable ubiquitin-conjugating enzyme E2 ... 297 3e-79 tr|B8LNY8|B8LNY8_PICSI Putative uncharacterized protein OS=Picea... 297 3e-79 tr|A9NX37|A9NX37_PICSI Putative uncharacterized protein OS=Picea... 297 3e-79 tr|Q94FU3|Q94FU3_SOLLC Ubiquitin conjugating enzyme 2 OS=Solanum... 284 3e-75 tr|B7FML7|B7FML7_MEDTR Putative uncharacterized protein OS=Medic... 280 4e-74 tr|Q8VY32|Q8VY32_MAIZE Putative uncharacterized protein OS=Zea m... 258 2e-67 tr|B4FDP3|B4FDP3_MAIZE Putative uncharacterized protein OS=Zea m... 258 2e-67 tr|B0ZBJ0|B0ZBJ0_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea may... 258 2e-67 tr|A0EVF8|A0EVF8_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea may... 258 2e-67 tr|Q69Y56|Q69Y56_ORYSJ Os06g0193000 protein OS=Oryza sativa subs... 256 8e-67 tr|A2YA81|A2YA81_ORYSI Putative uncharacterized protein OS=Oryza... 256 8e-67 tr|A8JEV0|A8JEV0_CHLRE Predicted protein (Fragment) OS=Chlamydom... 238 2e-61 tr|Q5GAR9|Q5GAR9_MAIZE Uce2 OS=Zea mays GN=uce2 PE=3 SV=1 234 2e-60 tr|B5YN48|B5YN48_THAPS Predicted protein (Fragment) OS=Thalassio... 213 6e-54 tr|Q5U4V7|Q5U4V7_XENLA LOC495424 protein OS=Xenopus laevis GN=ub... 207 4e-52 tr|Q504T9|Q504T9_HUMAN Ubiquitin-conjugating enzyme E2, J2 (UBC6... 206 5e-52 tr|B1AMF0|B1AMF0_HUMAN Ubiquitin-conjugating enzyme E2, J2 (UBC6... 206 5e-52 tr|Q7Q6A2|Q7Q6A2_ANOGA AGAP005954-PA OS=Anopheles gambiae GN=AGA... 206 9e-52 tr|Q28FR3|Q28FR3_XENTR Ubiquitin-conjugating enzyme E2, J2 (UBC6... 205 1e-51 tr|A9JTQ9|A9JTQ9_XENTR Ube2j2 protein OS=Xenopus tropicalis GN=u... 205 1e-51 tr|A4QNV0|A4QNV0_DANRE Zgc:162164 protein OS=Danio rerio GN=zgc:... 205 2e-51 tr|Q6AYB7|Q6AYB7_RAT Ubiquitin-conjugating enzyme E2, J2 homolog... 205 2e-51 tr|B1ASK9|B1ASK9_MOUSE Ubiquitin-conjugating enzyme E2, J2 homol... 205 2e-51 tr|B1ASK8|B1ASK8_MOUSE Ubiquitin-conjugating enzyme E2, J2 homol... 205 2e-51 tr|B0WPA3|B0WPA3_CULQU Ubiquitin-conjugating enzyme E2 J2 OS=Cul... 205 2e-51 tr|B7G226|B7G226_PHATR Predicted protein OS=Phaeodactylum tricor... 204 2e-51 tr|Q16RU3|Q16RU3_AEDAE Ubiquitin-conjugating enzyme E2 j2 OS=Aed... 203 6e-51 tr|Q8W1C4|Q8W1C4_MAIZE Ubiqutin conjugating enzyme 2 (Fragment) ... 200 4e-50 tr|Q9VEJ4|Q9VEJ4_DROME CG5823 OS=Drosophila melanogaster GN=CG58... 200 5e-50
>tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172602 PE=3 SV=1 Length = 245
Score = 299 bits (766), Expect = 6e-80 Identities = 137/162 (84%), Positives = 151/162 (93%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MADRACVQRLQKEFRALCKEPVPHV+A+PSP++ILEWHYVLEGS+ TPF GGVYHGK+KF Sbjct: 1 MADRACVQRLQKEFRALCKEPVPHVLARPSPTDILEWHYVLEGSKNTPFEGGVYHGKVKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YPYKPPGISM+TPNGRFATQKR+CMSMSDFHPETWNPMWSVSSILTGLLSFMM+ P Sbjct: 61 PPEYPYKPPGISMITPNGRFATQKRICMSMSDFHPETWNPMWSVSSILTGLLSFMMDNTP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTE 489 TTGSVS++D EK R AQ SLAFNCKS +FRKMFPEYVEK+ E Sbjct: 121 TTGSVSTSDVEKQRLAQNSLAFNCKSVVFRKMFPEYVEKHLE 162
>tr|O65079|O65079_PICMA Probable ubiquitin-conjugating enzyme E2 OS=Picea mariana GN=Sb55 PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 137/165 (83%), Positives = 153/165 (92%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KF Sbjct: 1 MAETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +P Sbjct: 61 PPEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLK 498 TTGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E K Sbjct: 121 TTGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQK 165
>tr|B8LNY8|B8LNY8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 137/165 (83%), Positives = 153/165 (92%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KF Sbjct: 1 MAETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +P Sbjct: 61 PPEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLK 498 TTGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E K Sbjct: 121 TTGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQK 165
>tr|A9NX37|A9NX37_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 137/165 (83%), Positives = 153/165 (92%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KF Sbjct: 1 MAETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +P Sbjct: 61 PPEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLK 498 TTGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E K Sbjct: 121 TTGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQK 165
>tr|Q94FU3|Q94FU3_SOLLC Ubiquitin conjugating enzyme 2 OS=Solanum lycopersicum PE=2 SV=1 Length = 239
Score = 284 bits (726), Expect = 3e-75 Identities = 127/162 (78%), Positives = 150/162 (92%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++ACV+RLQKE+RALCKEPV HVVA+PSP++ILEWHYVLEGSEGTPFAGG Y+GK+KF Sbjct: 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YP+KPPGISM TPNGRF TQK++C+SMSDFHPE+WNPMWSVSSILTGLLSFMM+ +P Sbjct: 61 PPEYPFKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTE 489 TTGSVS+T EK + A+ASLAFNCK+P FRK+FPEYVEKY + Sbjct: 121 TTGSVSTTVAEKKKLAKASLAFNCKNPTFRKLFPEYVEKYEQ 162
>tr|B7FML7|B7FML7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 241
Score = 280 bits (716), Expect = 4e-74 Identities = 123/162 (75%), Positives = 149/162 (91%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++AC++RLQKE+RALCKEPV H+VA+PSPS+ILEWHYVLEGSEGTPF+GG Y+GK+KF Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P +YPYKPPGISM TPNGRF TQK++C+SMSDFHPE+WNPMWSVSSILTGLLSFMM+ +P Sbjct: 61 PQEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTE 489 TTGSV++T EK R A++S++FNCK+ FRKMFPEYVEKY + Sbjct: 121 TTGSVNTTTVEKQRLAKSSMSFNCKNATFRKMFPEYVEKYNK 162
>tr|Q8VY32|Q8VY32_MAIZE Putative uncharacterized protein OS=Zea mays GN=uce2 PE=2 SV=1 Length = 239
Score = 258 bits (658), Expect = 2e-67 Identities = 116/165 (70%), Positives = 142/165 (86%), Gaps = 3/165 (1%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++ C++RLQKE+ ALCKEP P +VA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKF Sbjct: 1 MAEKGCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A Sbjct: 61 PPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTE 489 TTGS+ ++D EK R A+ASLA+NC+S P FRK+FPEYVEKY + Sbjct: 121 TTGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQ 165
>tr|B4FDP3|B4FDP3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 258 bits (658), Expect = 2e-67 Identities = 117/168 (69%), Positives = 143/168 (85%), Gaps = 3/168 (1%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++ C++RLQKE+ ALCKEP P VVA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKF Sbjct: 1 MAEKGCLKRLQKEYHALCKEPPPQVVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A Sbjct: 61 PPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTELLK 498 TTGS+ ++D EK R A+ASL +NC+S P FRK+FPEYVEKY + L+ Sbjct: 121 TTGSIKTSDAEKRRLAKASLVYNCESKNCPHFRKLFPEYVEKYNQQLQ 168
>tr|B0ZBJ0|B0ZBJ0_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea mays GN=uce2 PE=3 SV=1 Length = 239
Score = 258 bits (658), Expect = 2e-67 Identities = 116/165 (70%), Positives = 142/165 (86%), Gaps = 3/165 (1%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++ C++RLQKE+ ALCKEP P +VA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKF Sbjct: 1 MAEKGCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A Sbjct: 61 PPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTE 489 TTGS+ ++D EK R A+ASLA+NC+S P FRK+FPEYVEKY + Sbjct: 121 TTGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQ 165
>tr|A0EVF8|A0EVF8_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea mays GN=uce2 PE=3 SV=1 Length = 239
Score = 258 bits (658), Expect = 2e-67 Identities = 116/165 (70%), Positives = 142/165 (86%), Gaps = 3/165 (1%) Frame = +1
Query: 4 MADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKF 183 MA++ C++RLQKE+ ALCKEP P +VA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKF Sbjct: 1 MAEKGCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKF 60
Query: 184 PADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAP 363 P DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A Sbjct: 61 PPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL 120
Query: 364 TTGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTE 489 TTGS+ ++D EK R A+ASLA+NC+S P FRK+FPEYVEKY + Sbjct: 121 TTGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQ 165
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