DK956334
Clone id TST39A01NGRL0025_H13
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_H13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAACAACT
GCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCTCT
CGCAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCATCT
GGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTCCC
CCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGTCC
GCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGGCC
ATGTTGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAAGTTTG
GTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCTTGATTATC
TTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTGGCCATTTGGGCCTGCCAGGTCA
TCCTTATGGGCGCTGTTGAGGGGTACCGTGTTGC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 108
Score (bit) 197.0
E-value 1.0e-86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956334|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_H13, 5'
(574 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 197 1e-86
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 152 6e-71
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 148 2e-69
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 145 3e-69
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 144 1e-68
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 145 1e-68
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 142 4e-68
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 143 6e-68
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 144 6e-68
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 143 6e-68
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 140 7e-68
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 140 7e-68
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 141 9e-68
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 140 9e-68
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 144 1e-67
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 144 1e-67
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 139 2e-67
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 143 3e-67
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 139 4e-67
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 137 6e-67
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 140 8e-67
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 139 8e-67
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 137 8e-67
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 142 8e-67
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 137 1e-66
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 138 2e-66
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 137 2e-66
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 143 2e-66
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 140 2e-66
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 140 2e-66

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 197 bits (502), Expect(2) = 1e-86
Identities = 98/108 (90%), Positives = 104/108 (96%), Gaps = 1/108 (0%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 222
MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1 MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 223 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML
Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107



Score = 142 bits (359), Expect(2) = 1e-86
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 107 LGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVI 166

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 167 LMGAVEGYRV 176


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 152 bits (383), Expect(2) = 6e-71
Identities = 75/104 (72%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +1

Query: 58 TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 234
T+++ S F+GQ L KP NEL RKVG RV M KS+ SIWYG DRP YLGPFS
Sbjct: 3 TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 235 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106



Score = 136 bits (343), Expect(2) = 6e-71
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLAKNGVKFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+
Sbjct: 106 LGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVV 165

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 166 LMGAVEGYRV 175


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266

Score = 148 bits (374), Expect(2) = 2e-69
Identities = 79/111 (71%), Positives = 82/111 (73%), Gaps = 4/111 (3%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 213
MAATT SLSSS F+G K V L G+ARV M K+ SS S WYGSDR L
Sbjct: 1 MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 214 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 58 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108



Score = 135 bits (339), Expect(2) = 2e-69
Identities = 62/70 (88%), Positives = 68/70 (97%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+
Sbjct: 108 LGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVV 167

Query: 543 LMGAVEGYRV 572
LMGAVEGYR+
Sbjct: 168 LMGAVEGYRI 177


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 145 bits (367), Expect(2) = 3e-69
Identities = 75/110 (68%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 216
MAA TA S+++ +KPVNELSRKV G EARV M S+GS IWYG+DRP +
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 110



Score = 137 bits (344), Expect(2) = 3e-69
Identities = 63/70 (90%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+
Sbjct: 110 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVV 169

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 170 LMGAVEGYRV 179


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
Length = 265

Score = 144 bits (363), Expect(2) = 1e-68
Identities = 75/112 (66%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 210
MA++T +LSS+ F+G+ + + L GEARV M A +SSGS WYG DR
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 211 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML
Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107



Score = 136 bits (343), Expect(2) = 1e-68
Identities = 62/70 (88%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166

Query: 543 LMGAVEGYRV 572
LMGA+EGYRV
Sbjct: 167 LMGAIEGYRV 176


>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2,
chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1
Length = 267

Score = 145 bits (365), Expect(2) = 1e-68
Identities = 72/108 (66%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 222
MAA+T +LSS F+G+ +K S +G+G ++ K K SGS WYGSDR YLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 223 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
PFSG PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAML
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 108



Score = 135 bits (340), Expect(2) = 1e-68
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVI 167

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 168 LMGAVEGYRV 177


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 142 bits (357), Expect(2) = 4e-68
Identities = 72/109 (66%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 219
MA +T +LSSS F+G+ +K S G G ++ A K +SSGS WYG DR YL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109



Score = 137 bits (344), Expect(2) = 4e-68
Identities = 63/70 (90%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+
Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVV 168

Query: 543 LMGAVEGYRV 572
LMGAVEGYR+
Sbjct: 169 LMGAVEGYRI 178


>sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180,
chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1
SV=1
Length = 267

Score = 143 bits (360), Expect(2) = 6e-68
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 222
MAA+T +LSS F+G+ + S +G+G ++ K K SGS WYGSDR YLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 223 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
PFSG PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAML
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 108



Score = 135 bits (340), Expect(2) = 6e-68
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVI 167

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 168 LMGAVEGYRV 177


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
Length = 266

Score = 144 bits (364), Expect(2) = 6e-68
Identities = 70/107 (65%), Positives = 78/107 (72%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA+T +LSS F+G+ +K S G G ++ SGS WYGSDR YLGP
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
FSG PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAML
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 107



Score = 134 bits (336), Expect(2) = 6e-68
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 166

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 167 LMGAVEGYRV 176


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 143 bits (360), Expect(2) = 6e-68
Identities = 74/112 (66%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 210
MAA+T ++SS+ +G +K VG+ GE R+ M PK ++SGS WYG DR
Sbjct: 1 MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52

Query: 211 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML
Sbjct: 53 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 104



Score = 135 bits (340), Expect(2) = 6e-68
Identities = 61/70 (87%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+
Sbjct: 104 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 163

Query: 543 LMGAVEGYRV 572
LMGAVEGYR+
Sbjct: 164 LMGAVEGYRI 173


tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 114
Score (bit) 195.0
E-value 4.0e-85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956334|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_H13, 5'
(574 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant... 195 4e-85
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 163 3e-72
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 155 3e-72
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 157 2e-71
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 154 3e-71
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 155 4e-71
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 155 4e-71
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 155 4e-71
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-70
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 151 4e-70
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 151 7e-70
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 150 1e-69
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T... 149 2e-69
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 149 3e-69
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 146 2e-68
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote... 147 3e-68
tr|Q39141|Q39141_ARATH Photosystem II type I chlorophyll a /b bi... 147 5e-68
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 149 1e-67
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 144 1e-67
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind... 148 1e-67
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten... 147 2e-67
tr|Q39142|Q39142_ARATH Photosystem II type I chlorophyll a /b bi... 144 2e-67
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ... 142 2e-67
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 142 2e-67
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 143 3e-67
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 142 3e-67
tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ... 143 3e-67
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ... 141 4e-67
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ... 141 4e-67
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 141 5e-67

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
capillus-veneris GN=AcCab1 PE=4 SV=1
Length = 215

Score = 195 bits (495), Expect(2) = 4e-85
Identities = 100/114 (87%), Positives = 102/114 (89%), Gaps = 7/114 (6%)
Frame = +1

Query: 46 MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 204
MAATT A LSSSVFSGQQLKPVNELSRKVG EARVQMMAPKKSSSG+I YG+D
Sbjct: 1 MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 205 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML
Sbjct: 61 RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 114



Score = 144 bits (363), Expect(2) = 4e-85
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 114 LGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 173

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 174 LMGAVEGYRV 183


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
Length = 265

Score = 163 bits (412), Expect(2) = 3e-72
Identities = 79/107 (73%), Positives = 88/107 (82%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA TA S+++ LKPVNELSRKVG+ EARV M KS+S SIWYG+DRP YLGP
Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
FSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 107



Score = 133 bits (334), Expect(2) = 3e-72
Identities = 62/70 (88%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+
Sbjct: 107 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVV 166

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 167 LMGAVEGYRV 176


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 155 bits (393), Expect(2) = 3e-72
Identities = 77/107 (71%), Positives = 85/107 (79%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA TA S+++ LKPVNELSRKVG EARV M K S S SIWYG+DRP +LGP
Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 105



Score = 140 bits (353), Expect(2) = 3e-72
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 105 LGALGCVTPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 164

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 165 LMGAVEGYRV 174


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 157 bits (396), Expect(2) = 2e-71
Identities = 76/107 (71%), Positives = 84/107 (78%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA TA S+++ LKPVNELSRKVG EAR+ M SS SIWYG+DRP YLGP
Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 107



Score = 136 bits (343), Expect(2) = 2e-71
Identities = 65/70 (92%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAKNGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 107 LGALGCVTPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVI 166

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 167 LMGAVEGYRV 176


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 154 bits (390), Expect(2) = 3e-71
Identities = 76/109 (69%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 219
MAA TA S+++ LKPVNELSRKVG+ +ARV M S+GS IWYG+DRP YL
Sbjct: 1 MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 109



Score = 138 bits (348), Expect(2) = 3e-71
Identities = 65/70 (92%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 109 LGALGCVTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 168

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 169 LMGAVEGYRV 178


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 155 bits (392), Expect(2) = 4e-71
Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 216
MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP +
Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 110



Score = 137 bits (345), Expect(2) = 4e-71
Identities = 64/70 (91%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 110 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 169

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 170 LMGAVEGYRV 179


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 155 bits (392), Expect(2) = 4e-71
Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 216
MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP +
Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 217 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 110



Score = 137 bits (345), Expect(2) = 4e-71
Identities = 64/70 (91%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 110 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 169

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 170 LMGAVEGYRV 179


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
Length = 263

Score = 155 bits (392), Expect(2) = 4e-71
Identities = 76/107 (71%), Positives = 86/107 (80%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA TA S+++ LKPVNELSR+VGA EARV M K + S SIWYG+DRP +LGP
Sbjct: 1 MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 105



Score = 137 bits (345), Expect(2) = 4e-71
Identities = 64/70 (91%), Positives = 70/70 (100%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGC+TPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVI
Sbjct: 105 LGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 164

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 165 LMGAVEGYRV 174


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 155 bits (393), Expect(2) = 2e-70
Identities = 78/109 (71%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 219
MAA TA S+++ LKPVNELSRKVG EARV M A K ++S SIWYG+DRP YL
Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 220 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 109



Score = 134 bits (338), Expect(2) = 2e-70
Identities = 64/70 (91%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 109 LGALGCVTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVI 168

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 169 LMGAVEGYRV 178


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
Length = 263

Score = 151 bits (382), Expect(2) = 4e-70
Identities = 76/107 (71%), Positives = 86/107 (80%)
Frame = +1

Query: 46 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 225
MAA TA+ S+++ LK +NELSRKVG +ARV M K SSS SIWYG+DRP YLGP
Sbjct: 1 MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 226 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 366
SG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 105



Score = 137 bits (346), Expect(2) = 4e-70
Identities = 66/70 (94%), Positives = 69/70 (98%)
Frame = +3

Query: 363 VGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVI 542
+GALGCVTPELLAKNGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVI
Sbjct: 105 LGALGCVTPELLAKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVI 164

Query: 543 LMGAVEGYRV 572
LMGAVEGYRV
Sbjct: 165 LMGAVEGYRV 174