DK956336 |
Clone id |
TST39A01NGRL0025_H15 |
Library |
TST39 |
Length |
502 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_H15. 5' end sequence. |
Accession |
DK956336 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL64Contig1 |
Sequence |
GAGAGCAGGCTAGTCTGCGTTTTCCTGCGATCGTAGCTCGCCGGGTCAAGCAGCAGCCAT GGTGCTTTCTCAAAAGGAAGCCGATATCCAAATGATGCTTGATGCCGATAGGCACCTCGG CACGAAGAATTGCAATTTTCAGATGGAGCGTTACGTGTGGAAGCGTCGATCTGACGGAAT TTTTATCATCAATGTAGGAAAAACATGGGACAAGCTGGAGTTGGCAGCGAGAGTGATTGT CGCTATTGAAAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGGTCAGAGGGC AGTATTAAAATTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCACACTCCAGG AACGTTTACCAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGATTTTGACAGA CCCACGTACTGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCCTATTATTGC ATTTTGTGACACAGATTCCCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22518 |
Definition |
sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max |
Align length |
146 |
Score (bit) |
270.0 |
E-value |
4.0e-72 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4G194 |
Definition |
tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays |
Align length |
156 |
Score (bit) |
273.0 |
E-value |
4.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956336|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_H15, 5' (502 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 273 4e-72 tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs... 272 6e-72 tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza... 272 6e-72 tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza... 271 1e-71 tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 271 2e-71 tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 270 2e-71 tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten... 270 2e-71 tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten... 270 2e-71 tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea... 270 3e-71 tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea... 270 4e-71 tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m... 269 5e-71 tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s... 268 8e-71 tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque... 268 8e-71 tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre... 268 8e-71 tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m... 268 8e-71 tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit... 268 8e-71 tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza... 268 8e-71 tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 268 1e-70 tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 268 1e-70 tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m... 268 1e-70 tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic... 267 2e-70 tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ... 267 2e-70 tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis... 267 2e-70 tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul... 266 3e-70 tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar... 266 4e-70 tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 265 7e-70 tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul... 264 2e-69 tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul... 264 2e-69 tr|A9PC77|A9PC77_POPTR Putative uncharacterized protein OS=Popul... 261 1e-68 tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=... 261 1e-68
>tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 273 bits (697), Expect = 4e-72 Identities = 134/156 (85%), Positives = 143/156 (91%) Frame = +2
Query: 35 SSPGQAAAMVLSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDK 214 +S G A LSQKE DIQMML AD HLGTKNC+FQMERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 ASAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDK 62
Query: 215 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 394 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 395 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSP 502 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSP Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 158
>tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subsp. japonica GN=B1056G08.113 PE=2 SV=2 Length = 305
Score = 272 bits (696), Expect = 6e-72 Identities = 133/156 (85%), Positives = 145/156 (92%) Frame = +2
Query: 35 SSPGQAAAMVLSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDK 214 ++ G AAA LSQ+E DIQMML AD HLGTKNC+FQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 215 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 394 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 395 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSP 502 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSP Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 157
>tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26872 PE=3 SV=1 Length = 305
Score = 272 bits (696), Expect = 6e-72 Identities = 133/156 (85%), Positives = 145/156 (92%) Frame = +2
Query: 35 SSPGQAAAMVLSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDK 214 ++ G AAA LSQ+E DIQMML AD HLGTKNC+FQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 215 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 394 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 395 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSP 502 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSP Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 157
>tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11954 PE=3 SV=1 Length = 310
Score = 271 bits (693), Expect = 1e-71 Identities = 133/156 (85%), Positives = 143/156 (91%) Frame = +2
Query: 35 SSPGQAAAMVLSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDK 214 ++ G A LSQ+E DIQMML AD HLGTKNC+FQMERYV+KRRSDGIFIIN+GKTW+K Sbjct: 4 AAAGGGAPRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEK 63
Query: 215 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 394 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 64 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 123
Query: 395 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSP 502 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSP Sbjct: 124 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 159
>tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126323 PE=3 SV=1 Length = 305
Score = 271 bits (692), Expect = 2e-71 Identities = 131/145 (90%), Positives = 138/145 (95%) Frame = +2
Query: 68 SQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAI 247 + KE+D+QMML AD HLGTKNC+FQMERYVWKRRSDGIFIINVGKT++KLELAARVI AI Sbjct: 1 TMKESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAI 60
Query: 248 ENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPR 427 ENPQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPR Sbjct: 61 ENPQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPR 120
Query: 428 TDHQPIKEAALGNIPIIAFCDTDSP 502 TDHQPI EAALGNIP+IAFCDTDSP Sbjct: 121 TDHQPIMEAALGNIPVIAFCDTDSP 145
>tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 270 bits (691), Expect = 2e-71 Identities = 133/156 (85%), Positives = 142/156 (91%) Frame = +2
Query: 35 SSPGQAAAMVLSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDK 214 ++ G A LSQKE DIQMML AD HLGTKNC+FQ ERYV+KRRSDGI+IIN+GKTWDK Sbjct: 3 AAAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQTERYVFKRRSDGIYIINLGKTWDK 62
Query: 215 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 394 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 395 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSP 502 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSP Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 158
>tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193949 PE=3 SV=1 Length = 292
Score = 270 bits (691), Expect = 2e-71 Identities = 131/143 (91%), Positives = 137/143 (95%) Frame = +2
Query: 74 KEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIEN 253 KE+D+QMML AD HLGTKNC+FQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIEN Sbjct: 2 KESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIEN 61
Query: 254 PQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTD 433 PQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTD Sbjct: 62 PQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTD 121
Query: 434 HQPIKEAALGNIPIIAFCDTDSP 502 HQPI EAALGNIP+IAFCDTDSP Sbjct: 122 HQPIMEAALGNIPVIAFCDTDSP 144
>tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105781 PE=3 SV=1 Length = 292
Score = 270 bits (691), Expect = 2e-71 Identities = 131/143 (91%), Positives = 137/143 (95%) Frame = +2
Query: 74 KEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIEN 253 KE+D+QMML AD HLGTKNC+FQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIEN Sbjct: 2 KESDVQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIEN 61
Query: 254 PQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTD 433 PQDIIVQSARPYGQRAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTD Sbjct: 62 PQDIIVQSARPYGQRAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTD 121
Query: 434 HQPIKEAALGNIPIIAFCDTDSP 502 HQPI EAALGNIP+IAFCDTDSP Sbjct: 122 HQPIMEAALGNIPVIAFCDTDSP 144
>tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 270 bits (690), Expect = 3e-71 Identities = 132/146 (90%), Positives = 140/146 (95%) Frame = +2
Query: 65 LSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 244 LSQKEADIQMML AD HLGTKNC+FQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 245 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 424 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 425 RTDHQPIKEAALGNIPIIAFCDTDSP 502 RTDHQPI+EAALGNIP IAFCDTDSP Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSP 153
>tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 270 bits (689), Expect = 4e-71 Identities = 131/146 (89%), Positives = 140/146 (95%) Frame = +2
Query: 65 LSQKEADIQMMLDADRHLGTKNCNFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 244 LSQKEAD+QMML AD HLGTKNC+FQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 245 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 424 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 425 RTDHQPIKEAALGNIPIIAFCDTDSP 502 RTDHQPI+EAALGNIP IAFCDTDSP Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSP 153
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