DK956358
Clone id TST39A01NGRL0025_I13
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_I13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGGAAAAGTATATCATTGAGTCTAAGAAGCAAGATAACAGAGAGAAGTTGAGAGGATGAT
GTGTGAACGAGTAGTGTCATTGAAGCAAACCATTGAGGTCGGGGTTTGAAGAGGGAAGAA
CATTGGAGGGAGTCAGATGGTGATGGGATCCTTAGAGGGGATTTTGAGTAGGGCCAATAC
AGGAGGCAATATGCAGAGCCTCAAGAGGATGACGAGACAGAGCCAGTCTATAGTACGCTA
TCCAGGAAAATTGTTGAGGAGAGTAAGAAAGCAAAGCAGGGAGACCAGGTACAAGCAAAG
CAAAATGAATTGCAGGATGGGATGATAAAGGCAAAGGAGAGAAGGTGTTGCTGAGGCCAT
ATGCAAAACCTCATGAGGATGATGCAGAGAAGATGGGCCGAGGGTAGATGAAGCAAAGGG
GATAGATGATGAGGACCGACCTGCAGGTTGAGGGCAGAGCAAGATGGCTGAGGGTCGGTG
TAGCAGAGAGTGGGAAAGAGAAAGGGGAAGTAGAAGAAGAGCGGCAGATCATAGAGCAGA
GGATGCAAAGAGATCGTTTTCAGAGCCGGAGTGAAACAAAGAAGAGGGACTGAGTATAGT
TGATTGGTCCATGAAGC
■■Homology search results ■■ -
sp_hit_id Q5D1D6
Definition sp|Q5D1D6|GBP1_CERAE Interferon-induced guanylate-binding protein 1 OS=Cercopithecus aethiops
Align length 64
Score (bit) 35.0
E-value 0.31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_I13, 5'
(617 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5D1D6|GBP1_CERAE Interferon-induced guanylate-binding protei... 35 0.31
sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=R... 34 0.69
sp|Q5RBE1|GBP1_PONAB Interferon-induced guanylate-binding protei... 33 1.5
sp|P32455|GBP1_HUMAN Interferon-induced guanylate-binding protei... 33 1.5
sp|Q9WVB2|TLE2_MOUSE Transducin-like enhancer protein 2 OS=Mus m... 26 2.3
sp|P40059|DOT6_YEAST Disrupter of telomere silencing protein 6 O... 32 3.4
sp|P58835|HIS2_METKA Phosphoribosyl-ATP pyrophosphatase OS=Metha... 31 4.5
sp|Q8P3D7|PYRF_XANCP Orotidine 5'-phosphate decarboxylase OS=Xan... 31 5.8
sp|Q4UNV9|PYRF_XANC8 Orotidine 5'-phosphate decarboxylase OS=Xan... 31 5.8
sp|Q4LE39|ARI4B_HUMAN AT-rich interactive domain-containing prot... 31 5.8
sp|P51829|ADCY7_MOUSE Adenylate cyclase type 7 OS=Mus musculus G... 31 5.8
sp|Q3BMA4|PYRF_XANC5 Orotidine 5'-phosphate decarboxylase OS=Xan... 30 9.9
sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidop... 30 9.9

>sp|Q5D1D6|GBP1_CERAE Interferon-induced guanylate-binding protein 1
OS=Cercopithecus aethiops GN=GBP1 PE=2 SV=1
Length = 590

Score = 35.0 bits (79), Expect = 0.31
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1

Query: 175 QYRRQYAEPQEDDETEPVYS---TLSRKIVEESKKAKQGDQVQAK--QNELQDGMIKAKE 339
++ +Q E E D + + TL+ K+ E+ + K+G Q +++ QNE+QD K ++
Sbjct: 524 EHLKQLTEKMERDRAQLLKEQERTLALKLQEQERLLKEGFQTESRKMQNEIQDLQKKMRQ 583

Query: 340 RRCC 351
RR C
Sbjct: 584 RRTC 587


>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein
OS=Rattus norvegicus GN=Slmap PE=3 SV=1
Length = 858

Score = 33.9 bits (76), Expect = 0.69
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1

Query: 247 KIVEESKKAKQGDQVQAKQNELQDGMIKAKER 342
K+VEESK +K+ +Q +AK+++L D + +KE+
Sbjct: 450 KVVEESKLSKEENQAKAKESDLSDTLSPSKEK 481


>sp|Q5RBE1|GBP1_PONAB Interferon-induced guanylate-binding protein 1
OS=Pongo abelii GN=GBP1 PE=2 SV=1
Length = 592

Score = 32.7 bits (73), Expect = 1.5
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1

Query: 175 QYRRQYAEPQEDDETEPVYS---TLSRKIVEESKKAKQGDQVQAK--QNELQDGMIKAKE 339
++ +Q E E+D + + TL+ K+ E+ + K+G Q +++ +NE+QD K +
Sbjct: 526 EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRR 585

Query: 340 RRCC 351
R+ C
Sbjct: 586 RKAC 589


>sp|P32455|GBP1_HUMAN Interferon-induced guanylate-binding protein 1
OS=Homo sapiens GN=GBP1 PE=1 SV=1
Length = 592

Score = 32.7 bits (73), Expect = 1.5
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1

Query: 175 QYRRQYAEPQEDDETEPVYS---TLSRKIVEESKKAKQGDQVQAK--QNELQDGMIKAKE 339
++ +Q E E+D + + TL+ K+ E+ + K+G Q +++ +NE+QD K +
Sbjct: 526 EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRR 585

Query: 340 RRCC 351
R+ C
Sbjct: 586 RKAC 589


>sp|Q9WVB2|TLE2_MOUSE Transducin-like enhancer protein 2 OS=Mus
musculus GN=Tle2 PE=2 SV=1
Length = 767

Score = 25.8 bits (55), Expect(2) = 2.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3

Query: 447 PAGRS-SSSIPFASSTLGPSSLHHPHEVLHMASATPSLLCLYHPI 316
PA RS +S P SST GPSS H ++ +A + L P+
Sbjct: 324 PASRSCGTSPPQDSSTPGPSSASHLCQLAAQPAAPTDSIALRSPL 368



Score = 25.4 bits (54), Expect(2) = 2.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -2

Query: 340 SPLPLSSHPAIHFALLVPGLPALLSYSPQQFSWIAYYR----LALSRHP 206
S L SH ++ L +PG L SPQ S + Y R +A HP
Sbjct: 376 SSFSLGSHSTLNGDLSMPGSYVGLHLSPQVSSSVVYGRSPLQMAFESHP 424


>sp|P40059|DOT6_YEAST Disrupter of telomere silencing protein 6
OS=Saccharomyces cerevisiae GN=DOT6 PE=1 SV=1
Length = 670

Score = 31.6 bits (70), Expect = 3.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3

Query: 435 SSSSIPFASSTLGPSSLHHPHEVLH 361
++SS+PFA TL + HHPH+ LH
Sbjct: 209 AASSMPFAPPTLPAALPHHPHQHLH 233


>sp|P58835|HIS2_METKA Phosphoribosyl-ATP pyrophosphatase
OS=Methanopyrus kandleri GN=hisE PE=3 SV=1
Length = 100

Score = 31.2 bits (69), Expect = 4.5
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +1

Query: 193 AEPQEDDETEPVYSTLSRKIVEESKK----AKQGDQ 288
AE EDD+T+P + + KI+EES + AK GD+
Sbjct: 28 AELTEDDDTKPAINKICEKIIEESGELILAAKDGDR 63


>sp|Q8P3D7|PYRF_XANCP Orotidine 5'-phosphate decarboxylase
OS=Xanthomonas campestris pv. campestris GN=pyrF PE=3
SV=1
Length = 243

Score = 30.8 bits (68), Expect = 5.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -2

Query: 337 PLPLSSHPAIHFALLVPGLPALLSYSPQQFSWIAYYRLAL 218
PLPL++H + FAL VPG +++ + +A+Y++ +
Sbjct: 5 PLPLAAHDRLIFALDVPGHDEAIAWVDRLGESVAFYKIGM 44


>sp|Q4UNV9|PYRF_XANC8 Orotidine 5'-phosphate decarboxylase
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=pyrF PE=3 SV=1
Length = 243

Score = 30.8 bits (68), Expect = 5.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -2

Query: 337 PLPLSSHPAIHFALLVPGLPALLSYSPQQFSWIAYYRLAL 218
PLPL++H + FAL VPG +++ + +A+Y++ +
Sbjct: 5 PLPLAAHDRLIFALDVPGHDEAIAWVDRLGESVAFYKIGM 44


>sp|Q4LE39|ARI4B_HUMAN AT-rich interactive domain-containing protein
4B OS=Homo sapiens GN=ARID4B PE=1 SV=2
Length = 1312

Score = 30.8 bits (68), Expect = 5.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1

Query: 205 EDDETEPVYSTLSRKIVEESKKAKQGDQVQAKQNE 309
+DD+T V +L+ K+ E +KAK GD+ +++E
Sbjct: 503 KDDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDE 537


tr_hit_id A7SHG3
Definition tr|A7SHG3|A7SHG3_NEMVE Predicted protein OS=Nematostella vectensis
Align length 57
Score (bit) 37.0
E-value 0.93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_I13, 5'
(617 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7SHG3|A7SHG3_NEMVE Predicted protein OS=Nematostella vectens... 37 0.93
tr|B7U343|B7U343_LOXAF Neurofilament medium tail domain (Fragmen... 37 1.2
tr|B0WLU0|B0WLU0_CULQU Lethal(3)malignant brain tumor OS=Culex q... 35 2.7
tr|Q9JLG3|Q9JLG3_CRIGR Niemann-Pick type C1 protein OS=Cricetulu... 35 4.6
tr|Q4W9Q7|Q4W9Q7_ASPFU Putative uncharacterized protein OS=Asper... 35 4.6
tr|B0YEE9|B0YEE9_ASPFC Putative uncharacterized protein OS=Asper... 35 4.6
tr|Q7NBI4|Q7NBI4_MYCGA DnaJ OS=Mycoplasma gallisepticum GN=DanJ ... 34 7.8
tr|Q29GS2|Q29GS2_DROPS GA14699 OS=Drosophila pseudoobscura pseud... 34 7.8
tr|B4NPR0|B4NPR0_DROWI GK18497 OS=Drosophila willistoni GN=GK184... 34 7.8
tr|B4GUV0|B4GUV0_DROPE GL12955 OS=Drosophila persimilis GN=GL129... 34 7.8
tr|A8PT06|A8PT06_MALGO Putative uncharacterized protein OS=Malas... 34 7.8

>tr|A7SHG3|A7SHG3_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g245298 PE=4 SV=1
Length = 1081

Score = 37.0 bits (84), Expect = 0.93
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1

Query: 175 QYRRQYAEPQEDDETEPVYSTLSRKIVEESKKAKQGDQV-QAKQNELQDGMIKAKER 342
Q RR Y+E QE+ E + + R+ ++++++A + D V AK+ EL++G+ +A++R
Sbjct: 831 QRRRLYSEVQEEKERIALQAQRQRQELDDARRALEEDTVLMAKERELKEGVREARDR 887


>tr|B7U343|B7U343_LOXAF Neurofilament medium tail domain (Fragment)
OS=Loxodonta africana GN=nefm PE=4 SV=1
Length = 547

Score = 36.6 bits (83), Expect = 1.2
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1

Query: 103 GLKREEHWRESDGDGILRGDFE*GQYRRQYA-EPQEDDETEPVYSTLSRKIVEESKKAKQ 279
G K EE E + +G E G ++ + E +E+ ETE ++ EE K K+
Sbjct: 120 GKKEEEEEEEEEEEGAKSDQAEEGGSEKEVSSEKEEEGETEAEGEGEEAEVKEERKAEKK 179

Query: 280 GDQVQAKQNELQDGMIKAKER 342
G++V AK+ + + ++ E+
Sbjct: 180 GEEVAAKEELVPEAKVEKPEK 200


>tr|B0WLU0|B0WLU0_CULQU Lethal(3)malignant brain tumor OS=Culex
quinquefasciatus GN=CpipJ_CPIJ007558 PE=4 SV=1
Length = 937

Score = 35.4 bits (80), Expect = 2.7
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1

Query: 187 QYAEPQEDDETEPVYSTLSRKIVEESKKAKQGDQVQAKQNELQDGMIKA 333
Q E +EDDE E V T+ +KIV E ++ K D+ + +L + IK+
Sbjct: 410 QQEEEEEDDEEEEVEETVLQKIVNEEERPKTPDEQKVTLEDLLNEQIKS 458


>tr|Q9JLG3|Q9JLG3_CRIGR Niemann-Pick type C1 protein OS=Cricetulus
griseus GN=NPC1 PE=2 SV=1
Length = 1277

Score = 34.7 bits (78), Expect = 4.6
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2

Query: 328 LSSHPAIHFALLVPGLPALLSYSPQQFSWIAYYRLALSRHPLEALHIASCIGPTQN 161
LSS PA+H L GL L+ + Q +++ L + R L I C+G T N
Sbjct: 751 LSSMPAVHTFSLFAGLAVLIDFLLQITCFVSLLGLDIKRQEKNRLDILCCVGGTDN 806


>tr|Q4W9Q7|Q4W9Q7_ASPFU Putative uncharacterized protein
OS=Aspergillus fumigatus GN=AFUA_4G04080 PE=4 SV=1
Length = 521

Score = 34.7 bits (78), Expect = 4.6
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1

Query: 196 EPQEDDETEPVYSTLSRKIVEE---SKKAKQGDQVQAKQNELQDGMIKAKERR 345
+ + DDE E V+ T R +EE +KK K+ ++ + K+ E + M K+K +R
Sbjct: 434 DEESDDELEEVHDTRKRVAIEEEKLAKKEKELEETERKKREEEQKMSKSKGKR 486


>tr|B0YEE9|B0YEE9_ASPFC Putative uncharacterized protein
OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=AFUB_098940 PE=4 SV=1
Length = 521

Score = 34.7 bits (78), Expect = 4.6
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1

Query: 196 EPQEDDETEPVYSTLSRKIVEE---SKKAKQGDQVQAKQNELQDGMIKAKERR 345
+ + DDE E V+ T R +EE +KK K+ ++ + K+ E + M K+K +R
Sbjct: 434 DEESDDELEEVHDTRKRVAIEEEKLAKKEKELEETERKKREEEQKMSKSKGKR 486


>tr|Q7NBI4|Q7NBI4_MYCGA DnaJ OS=Mycoplasma gallisepticum GN=DanJ
PE=4 SV=1
Length = 298

Score = 33.9 bits (76), Expect = 7.8
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1

Query: 184 RQYAEPQEDDETEPVYSTLSRKIVEESKKAKQGDQVQAKQNELQDG 321
+QY +PQ D T Y T S KI E +KA Q +A + L +G
Sbjct: 58 QQYDQPQYDQHTTNNYQTSSYKITPEQEKAYYQKQTEAFYDHLNNG 103


>tr|Q29GS2|Q29GS2_DROPS GA14699 OS=Drosophila pseudoobscura
pseudoobscura GN=GA14699 PE=4 SV=2
Length = 479

Score = 33.9 bits (76), Expect = 7.8
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1

Query: 181 RRQYAEPQEDD---ETEPVYSTLSRKIVEESKKAKQGDQVQAKQNELQ 315
+ + +E +EDD ++ Y T++ + +SKK+KQ + + KQ ELQ
Sbjct: 282 KEEESEQEEDDPNDSSDKAYRTINAAVERDSKKSKQARRKELKQKELQ 329


>tr|B4NPR0|B4NPR0_DROWI GK18497 OS=Drosophila willistoni GN=GK18497
PE=4 SV=1
Length = 1123

Score = 33.9 bits (76), Expect = 7.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1

Query: 103 GLKR--EEHWRESDGDGILRGDFE*GQYRRQYAEPQEDDETEPVYSTLSRKIVEESKKA 273
GL R +H D DG L GD++ RQ+ D++ VY L ++E++K A
Sbjct: 348 GLARLASDHDAGDDNDGSLSGDYQCSMLLRQFLASSPDEQQRRVYLCLLAPLLEQAKDA 406


>tr|B4GUV0|B4GUV0_DROPE GL12955 OS=Drosophila persimilis GN=GL12955
PE=4 SV=1
Length = 479

Score = 33.9 bits (76), Expect = 7.8
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1

Query: 181 RRQYAEPQEDD---ETEPVYSTLSRKIVEESKKAKQGDQVQAKQNELQ 315
+ + +E +EDD ++ Y T++ + +SKK+KQ + + KQ ELQ
Sbjct: 282 KEEESEQEEDDPNDSSDKAYRTINAAVERDSKKSKQARRKELKQKELQ 329