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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956359
Clone id TST39A01NGRL0025_I14
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_I14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ACAAGGGCAAAATCTAAGGCGGCTGAAAGATCACAATCAGGGCTTCGGCGGAGTCAAAGA
GCCACCAGAAGCCACATAGATTATAGCAAGTATGAAGAAAGCGATGATGGCGATGAGAAT
ATGAAAGATGCCCACAGTCCGGATAGAGCAGACAGTATGAGGGGGGAGCAATGTTGGCAA
ATGGCAGGGATTTAAATGAATTAGAGCCAAGACATGCACCCAGTGGGCAGCATTGGGACA
ACACTGATCCAGTAGGTGAAGCCTATGATAGAAAGGATATAGATCAAGGTAATGGTCCTC
TTAGGACAGGGAAGGGAGTCTATGAAATGGAGGAGCTTCATGGAGGGGATGATTCGCATA
GACCAACAAATGGTGTCAATTGCGAGCCCATGGTTGATGTCAAGCCTGATGTTAAGGTGC
ACAGATTTTTGGATTTGAATGTAGCAGCTCCCATGATAGGCGGACTAGATGATGGTTGCA
GCAAGGTCTACAATCACTCCTTGCCTTTCATGGTTGAGAAATTTGAAAACAGTGGTGATG
ATGGTTCT
■■Homology search results ■■ -
sp_hit_id P43428
Definition sp|P43428|G6PC_RAT Glucose-6-phosphatase OS=Rattus norvegicus
Align length 89
Score (bit) 31.6
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956359|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_I14, 5'
         (548 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43428|G6PC_RAT Glucose-6-phosphatase OS=Rattus norvegicus GN...    32   2.6  
sp|P0AAS5|YLBF_ECOLI Uncharacterized protein ylbF OS=Escherichia...    31   3.4  
sp|P0AAS6|YLBF_ECO57 Uncharacterized protein ylbF OS=Escherichia...    31   3.4  
sp|Q54GR1|Y6146_DICDI Putative uncharacterized protein DDB_G0289...    31   3.4  
sp|P03230|LMP1_EBV Latent membrane protein 1 OS=Epstein-Barr vir...    31   3.4  
sp|Q9W0V7|MTH8_DROME Probable G-protein coupled receptor Mth-lik...    31   4.5  
sp|Q88A49|GLPE_PSESM Thiosulfate sulfurtransferase glpE OS=Pseud...    30   5.9  
sp|Q48NU0|GLPE_PSE14 Thiosulfate sulfurtransferase glpE OS=Pseud...    30   5.9  
sp|Q4ZMG2|GLPE_PSEU2 Thiosulfate sulfurtransferase glpE OS=Pseud...    30   7.7  

>sp|P43428|G6PC_RAT Glucose-6-phosphatase OS=Rattus norvegicus
           GN=G6pc PE=2 SV=1
          Length = 357

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 25/89 (28%), Positives = 39/89 (43%)
 Frame = -1

Query: 536 TTVFKFLNHERQGVIVDLAATII*SAYHGSCYIQIQKSVHLNIRLDINHGLAIDTICWSM 357
           TT F  L  +  G ++ L   +  S Y  SC  +++KS+   +                 
Sbjct: 255 TTPFASL-FKNLGTLLGLGLALNSSMYRKSCKGELRKSLPFRLAC--------------- 298

Query: 356 RIIPSMKLLHFIDSLPCPKRTITLIYILS 270
            I+ S+ LLH  DSL  P +  ++ YILS
Sbjct: 299 -IVASLGLLHLFDSLKPPSQIESIFYILS 326


>sp|P0AAS5|YLBF_ECOLI Uncharacterized protein ylbF OS=Escherichia
           coli (strain K12) GN=ylbF PE=4 SV=1
          Length = 271

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 335 LLHFIDSLPCPKRTITLIYILSIIGFT 255
           LLHF+ +L CPKRT   I  L  +G T
Sbjct: 225 LLHFVHALSCPKRTAVAIDSLLALGHT 251


>sp|P0AAS6|YLBF_ECO57 Uncharacterized protein ylbF OS=Escherichia
           coli O157:H7 GN=ylbF PE=4 SV=1
          Length = 271

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 335 LLHFIDSLPCPKRTITLIYILSIIGFT 255
           LLHF+ +L CPKRT   I  L  +G T
Sbjct: 225 LLHFVHALSCPKRTAVAIDSLLALGHT 251


>sp|Q54GR1|Y6146_DICDI Putative uncharacterized protein DDB_G0289963
           OS=Dictyostelium discoideum GN=DDB_G0289963 PE=4 SV=1
          Length = 527

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 34  QSGLRRSQRATRSHIDYSKYEESDDGDENMKDAHSPDRADSMRGEQ 171
           Q     +++  +  IDYS Y  +DDGD++  D  + +  DS   E+
Sbjct: 363 QQSSTNNKKPQQEEIDYSAYINNDDGDDDDDDDENENENDSQPEEE 408


>sp|P03230|LMP1_EBV Latent membrane protein 1 OS=Epstein-Barr virus
           (strain B95-8) GN=LMP1 PE=1 SV=1
          Length = 386

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 213 HAPSGQHWDNTDP--VGEAYDRKDIDQGNGPLRTGKGVYEMEELHGGDDSHRPT 368
           H+PS    ++  P  + E  + K  DQG   +  G G +  +  HGG D H PT
Sbjct: 308 HSPSDSAGNDGGPPQLTEEVENKGGDQGPPLMTDGGGGHSHDSGHGGGDPHLPT 361


>sp|Q9W0V7|MTH8_DROME Probable G-protein coupled receptor Mth-like 8
           OS=Drosophila melanogaster GN=mthl8 PE=2 SV=2
          Length = 492

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 23/79 (29%), Positives = 38/79 (48%)
 Frame = -1

Query: 356 RIIPSMKLLHFIDSLPCPKRTITLIYILSIIGFTYWISVVPMLPTGCMSWL*FI*IPAIC 177
           RI+PS+ L++ + S           YILS I F  ++S   ++ T  M WL F       
Sbjct: 282 RILPSLALMNLVLSF----------YILSFIAFKLYLSFYGVVFTKLMFWLIF------- 324

Query: 176 QHCSPLILSALSGLWASFI 120
              +P++L A+   W+ F+
Sbjct: 325 ---TPIVLVAVG--WSFFV 338


>sp|Q88A49|GLPE_PSESM Thiosulfate sulfurtransferase glpE
           OS=Pseudomonas syringae pv. tomato GN=glpE PE=3 SV=1
          Length = 106

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
 Frame = +3

Query: 117 EYERCPQSG*SRQYEGGAMLANGRDLNELEPRHAPSGQHWDNTDPVGEAYDRKDID---- 284
           E++R P          GA+L + RD    +  H P  QH DN   + +     D+D    
Sbjct: 3   EFKRIPPEQAQALRAQGAVLVDVRDAQAFQSNHIPDSQHLDN-HSIADFIANADLDKPLV 61

Query: 285 ---------QGNGPLRTGKGVYEMEELHGGDDSHRPT 368
                    Q       G+G  ++  + GG +  R T
Sbjct: 62  VVCYHGNSSQSAAAYLVGQGFSDVYSVDGGFERWRST 98


>sp|Q48NU0|GLPE_PSE14 Thiosulfate sulfurtransferase glpE
           OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
           Race 6) GN=glpE PE=3 SV=1
          Length = 106

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
 Frame = +3

Query: 117 EYERCPQSG*SRQYEGGAMLANGRDLNELEPRHAPSGQHWDNTDPVGEAYDRKDID---- 284
           E++R P        E GA+L + RD    +  H P   H DN   + +   + D+D    
Sbjct: 3   EFKRIPPEQAQALREQGAVLVDVRDAQTFQSNHIPDSVHLDN-HSIADFIAKADLDKPLV 61

Query: 285 ---------QGNGPLRTGKGVYEMEELHGGDDSHRPT 368
                    Q       G+G  ++  + GG +  R T
Sbjct: 62  VVCYHGNSSQSAAAYLVGQGFSDVYSVDGGFELWRAT 98


>sp|Q4ZMG2|GLPE_PSEU2 Thiosulfate sulfurtransferase glpE
           OS=Pseudomonas syringae pv. syringae (strain B728a)
           GN=glpE PE=3 SV=1
          Length = 106

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 12/96 (12%)
 Frame = +3

Query: 117 EYERCPQSG*SRQYEGGAMLANGRDLNELEPRHAPSGQHWDN---TDPVGEAYDRKDI-- 281
           E++R P        E GA+L + RD    E  H P   H DN    D + EA   K +  
Sbjct: 3   EFKRIPPEQAQALREQGAVLVDVRDPQAFESNHIPDSVHLDNHSIADFIREADLDKPLVV 62

Query: 282 -------DQGNGPLRTGKGVYEMEELHGGDDSHRPT 368
                   Q       G+G  ++  + GG +  R T
Sbjct: 63  VCYHGNSSQSAAAYLVGQGFSDVYSVDGGFELWRTT 98
tr_hit_id Q69WS4
Definition tr|Q69WS4|Q69WS4_ORYSJ Os07g0193600 protein OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 42.4
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956359|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_I14, 5'
         (548 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q69WS4|Q69WS4_ORYSJ Os07g0193600 protein OS=Oryza sativa subs...    42   0.016
tr|B8B858|B8B858_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.016
tr|A3BHG4|A3BHG4_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.016
tr|A7QI20|A7QI20_VITVI Chromosome chr17 scaffold_101, whole geno...    42   0.028
tr|A5C2W7|A5C2W7_VITVI Putative uncharacterized protein OS=Vitis...    42   0.028
tr|Q2PF39|Q2PF39_TRIPR Aminoacyl-tRNA synthetase OS=Trifolium pr...    37   0.68 
tr|A6QXZ9|A6QXZ9_AJECN Inositolphosphorylceramide-B C-26 hydroxy...    37   0.89 
tr|B5FZ62|B5FZ62_TAEGU Putative uncharacterized protein OS=Taeni...    35   2.6  
tr|O90689|O90689_EBVG Latent membrane protein 1 (Fragment) OS=Ep...    35   2.6  
tr|A9HEY0|A9HEY0_GLUDA Putative ribonuclease protein OS=Gluconac...    35   2.6  
tr|B5ZDI6|B5ZDI6_GLUDA Ribonuclease BN OS=Gluconacetobacter diaz...    35   2.6  
tr|A4AIY8|A4AIY8_9ACTN Cytochrome C assembly protein OS=marine a...    34   4.4  
tr|Q9AUR9|Q9AUR9_ORYSA Putative uncharacterized protein OSJNBb00...    34   4.4  
tr|Q10E16|Q10E16_ORYSJ Os03g0711300 protein OS=Oryza sativa subs...    34   4.4  
tr|B8AQC6|B8AQC6_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.4  
tr|A3ALZ9|A3ALZ9_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.4  
tr|B2TDE6|B2TDE6_BURPP Putative uncharacterized protein OS=Burkh...    34   5.8  
tr|B4FZE7|B4FZE7_MAIZE Putative uncharacterized protein OS=Zea m...    34   5.8  
tr|B2KJ64|B2KJ64_HORVD WRKY transcription factor 21 (Fragment) O...    34   5.8  
tr|Q0RTT5|Q0RTT5_FRAAA ABC transporter dipeptide permease OS=Fra...    33   7.5  
tr|Q9LMD2|Q9LMD2_ARATH F14D16.10 OS=Arabidopsis thaliana PE=4 SV=1     33   7.5  
tr|B2B5F8|B2B5F8_PODAN Predicted CDS Pa_2_4530 OS=Podospora anse...    30   9.5  
tr|Q8WYF8|Q8WYF8_HUMAN Potential LAG1 interactor (Fragment) OS=H...    33   9.8  
tr|B0E0G0|B0E0G0_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.8  

>tr|Q69WS4|Q69WS4_ORYSJ Os07g0193600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1118_E12.14 PE=4 SV=1
          Length = 578

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +1

Query: 7   AKSKAAERSQSGLRRSQRATRSHIDYSKYEESD----DGDENMKDAHSPD 144
           AK ++ +  Q+GLRRS+R++R  I+Y +Y+ SD     G E   DA  PD
Sbjct: 418 AKLRSVDEIQTGLRRSKRSSRQRINYQQYDYSDTDTEGGKEGKSDASDPD 467


>tr|B8B858|B8B858_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25237 PE=4 SV=1
          Length = 578

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +1

Query: 7   AKSKAAERSQSGLRRSQRATRSHIDYSKYEESD----DGDENMKDAHSPD 144
           AK ++ +  Q+GLRRS+R++R  I+Y +Y+ SD     G E   DA  PD
Sbjct: 418 AKLRSVDEIQTGLRRSKRSSRQRINYQQYDYSDTDTEGGKEGKSDASDPD 467


>tr|A3BHG4|A3BHG4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022486 PE=4 SV=1
          Length = 509

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = +1

Query: 7   AKSKAAERSQSGLRRSQRATRSHIDYSKYEESD----DGDENMKDAHSPD 144
           AK ++ +  Q+GLRRS+R++R  I+Y +Y+ SD     G E   DA  PD
Sbjct: 349 AKLRSVDEIQTGLRRSKRSSRQRINYQQYDYSDTDTEGGKEGKSDASDPD 398


>tr|A7QI20|A7QI20_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000060001
           PE=4 SV=1
          Length = 679

 Score = 41.6 bits (96), Expect = 0.028
 Identities = 19/43 (44%), Positives = 30/43 (69%)
 Frame = +1

Query: 10  KSKAAERSQSGLRRSQRATRSHIDYSKYEESDDGDENMKDAHS 138
           K ++ +  QSGLRRS+RATR+ I+Y +Y+ S+   E++K   S
Sbjct: 556 KLRSVDELQSGLRRSKRATRNRINYRQYDLSESETESLKQEKS 598


>tr|A5C2W7|A5C2W7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_004978 PE=4 SV=1
          Length = 757

 Score = 41.6 bits (96), Expect = 0.028
 Identities = 19/43 (44%), Positives = 30/43 (69%)
 Frame = +1

Query: 10  KSKAAERSQSGLRRSQRATRSHIDYSKYEESDDGDENMKDAHS 138
           K ++ +  QSGLRRS+RATR+ I+Y +Y+ S+   E++K   S
Sbjct: 617 KLRSVDELQSGLRRSKRATRNRINYRQYDLSESETESLKQEKS 659


>tr|Q2PF39|Q2PF39_TRIPR Aminoacyl-tRNA synthetase OS=Trifolium
           pratense PE=2 SV=1
          Length = 745

 Score = 37.0 bits (84), Expect = 0.68
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +1

Query: 34  QSGLRRSQRATRSHIDYSKYEESDDGDENMKDAHSPDRAD 153
           QS  RRS+RATR+ I+Y +YE SD   E  K   S   AD
Sbjct: 598 QSSPRRSKRATRNRINYKQYEMSDSETEFTKPGKSNASAD 637


>tr|A6QXZ9|A6QXZ9_AJECN Inositolphosphorylceramide-B C-26
           hydroxylase OS=Ajellomyces capsulata (strain NAm1 /
           WU24) GN=HCAG_02256 PE=4 SV=1
          Length = 385

 Score = 36.6 bits (83), Expect = 0.89
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
 Frame = +3

Query: 162 GGAMLAN--GRDLNELEPRHAPSGQHWDNTDPVGEAYDRKDIDQ-------GNGPLRTGK 314
           GG ++ +  G+D++E+  R  PS +H +    + E +    +++       GNG    G 
Sbjct: 44  GGDLILDYAGQDVSEIM-RDIPSHEHSEAAYEILEDHHVGFLEKSPVSKMNGNGDAAAGA 102

Query: 315 GVYEMEELHGGDDSHRPT---NGVNCEPMVDVKPDV----KVHRFLDLNVAAPMIGGL 467
              +   + G  DS +PT    G++ E  ++V+ D+    + H+FLDLN   P+ G L
Sbjct: 103 AAAKGSNMDGATDSPKPTYSSTGMSSEEDLNVETDLTADYRTHKFLDLN--RPLFGQL 158


>tr|B5FZ62|B5FZ62_TAEGU Putative uncharacterized protein
           OS=Taeniopygia guttata PE=2 SV=1
          Length = 313

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = +3

Query: 102 R*WR*EYERCPQSG*SRQYEGGAMLANGRDLNELEPRHAPSGQHWDNTDPVGEAYDRKDI 281
           R WR    RC Q    R  +  A L    D +  EP  + + QH+D + P G   ++K  
Sbjct: 13  RLWRGRAVRCQQYPPLRALQASAALRRASDEHRKEPLGSSTQQHFD-SPPDGHQPEQK-- 69

Query: 282 DQGNGPLRTGKGVYEMEE 335
            QG  P  TG+G  E E+
Sbjct: 70  PQGPHPSYTGQGGQESED 87


>tr|O90689|O90689_EBVG Latent membrane protein 1 (Fragment)
           OS=Epstein-Barr virus (strain GD1) GN=LMP-1 PE=4 SV=1
          Length = 69

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 249 PVGEAYDRKDIDQGNGPLRTGKGVYEMEELHGGDDSHRPT 368
           P+ E  + K  DQG  P+  G G +  +  HGG D H PT
Sbjct: 5   PLTEEVENKQGDQGPPPMTDGGGGHSHDSGHGGGDPHLPT 44


>tr|A9HEY0|A9HEY0_GLUDA Putative ribonuclease protein
           OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
           DSM 5601 / PAl5) GN=GDI1351 PE=4 SV=1
          Length = 321

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = -1

Query: 356 RIIPSMKLLHFIDSLPCPKRTITLIYILSIIGFTYWISVV 237
           R  P+ +++H+I  LP    T TLI+I+S IGF+Y++S +
Sbjct: 225 RFSPNRRIVHWICILP-GSCTATLIWIVSSIGFSYYVSTI 263