DK956360 |
Clone id |
TST39A01NGRL0025_I15 |
Library |
TST39 |
Length |
594 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_I15. 5' end sequence. |
Accession |
DK956360 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL117Contig1 |
Sequence |
ATCTGTGCTTTGTGGTGAAGAAGCGGACATCAGCGAGTGCAGGAGCGCTGCAGCTATGGC GGCCCAGCAGATGAGCAAGAAGCGCAAGTTTGTGGCAGATGGCGTTTTTTTTGCCGAGTT GAACGAAGTTCTCACGCGAGAGCTTGCTGAAGATGGGTACTCTGGCGTAGAGGTCCGGGT TACACCCATGCGAACTGAAATCATTATTCGTGCAACAAGGACCCAGAATGTGCTTGGGGA TAAGGGGAGAAGAATCAGAGAGTTAACATCTTTGGTTCAGAAGAGGTTTAACTTTCCTGA AGGCACCGTTGAATTGTATGCTGAGAAAGTTAACAATCGGGGTCTTTGTGCTATTGCACA AGCAGAGTCACTCCGTTACAAGCTTCTTGGAGGGCTTGCTGTCAGAAGGGCTTGCTATGG TGTCCTAAGGTTTGTCATGGAGAGTGGCGCGAAGGGTTGTGAGGTCATTGTGAGTGGTAA GCTGAGAGCCCAGCGAGCGAAGTCGATGAAGTTCAAAGATGGGTATATGATTTCCTCTGG GCATCCTGTGAACTTGTACATTGACTCTGCAGTTCGCCACGTGCTTTTGAGACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M339 |
Definition |
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis thaliana |
Align length |
169 |
Score (bit) |
306.0 |
E-value |
4.0e-83 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHH2 |
Definition |
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
169 |
Score (bit) |
324.0 |
E-value |
2.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956360|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_I15, 5' (594 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 324 2e-87 tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 320 3e-86 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 320 4e-86 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 320 5e-86 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 320 5e-86 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 320 5e-86 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 315 9e-85 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 315 2e-84 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 315 2e-84 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 313 5e-84 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 312 1e-83 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 311 1e-83 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 311 1e-83 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 311 2e-83 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 310 3e-83 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 310 3e-83 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 310 3e-83 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 310 3e-83 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 309 7e-83 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 309 9e-83 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 309 9e-83 tr|Q1WLZ2|Q1WLZ2_CHLIN 40S ribosomal protein S3 OS=Chlamydomonas... 306 6e-82 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 305 1e-81 tr|A8I4P5|A8I4P5_CHLRE Ribosomal protein S3 OS=Chlamydomonas rei... 301 1e-80 tr|Q801G7|Q801G7_PETMA Ribosomal protein S3 (Fragment) OS=Petrom... 292 9e-78 tr|Q1XGD5|Q1XGD5_LAMJA Ribosomal protein S3 (Fragment) OS=Lampet... 292 9e-78 tr|Q9D0A2|Q9D0A2_MOUSE Putative uncharacterized protein OS=Mus m... 291 1e-77 tr|Q7ZYT3|Q7ZYT3_XENLA Ribosomal protein S1a protein OS=Xenopus ... 290 4e-77 tr|Q6P8G2|Q6P8G2_XENTR Ribosomal protein S3 OS=Xenopus tropicali... 290 4e-77 tr|Q5ZJC1|Q5ZJC1_CHICK Putative uncharacterized protein OS=Gallu... 290 4e-77
>tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 324 bits (831), Expect = 2e-87 Identities = 165/169 (97%), Positives = 168/169 (99%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPEG VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 180
>tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 320 bits (821), Expect = 3e-86 Identities = 163/169 (96%), Positives = 166/169 (98%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLR Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLR 178
>tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 320 bits (820), Expect = 4e-86 Identities = 163/169 (96%), Positives = 166/169 (98%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLR Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLR 178
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 320 bits (819), Expect = 5e-86 Identities = 163/169 (96%), Positives = 167/169 (98%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLR Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLR 180
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 320 bits (819), Expect = 5e-86 Identities = 163/169 (96%), Positives = 167/169 (98%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLR Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLR 180
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 320 bits (819), Expect = 5e-86 Identities = 163/169 (96%), Positives = 167/169 (98%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLR Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLR 180
>tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034104001 PE=3 SV=1 Length = 234
Score = 315 bits (808), Expect = 9e-85 Identities = 162/169 (95%), Positives = 164/169 (97%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRF FPE TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 70 TSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLR Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLR 178
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 315 bits (806), Expect = 2e-84 Identities = 160/169 (94%), Positives = 165/169 (97%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LR Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLR 178
>tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166897 PE=3 SV=1 Length = 231
Score = 315 bits (806), Expect = 2e-84 Identities = 160/169 (94%), Positives = 165/169 (97%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LR Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLR 178
>tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016476001 PE=3 SV=1 Length = 234
Score = 313 bits (802), Expect = 5e-84 Identities = 159/169 (94%), Positives = 164/169 (97%) Frame = +2
Query: 86 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 265 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 266 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 445 TS+VQKRF FPE +VELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 446 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR 592 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLR Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLR 178
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