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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956380
Clone id TST39A01NGRL0025_J11
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_J11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCGAAGGAGGGGAGGCAGCAGGCGTAGCGATGAGTCACCGCAAGTTCGAGCACCCTCGCC
ACGGATCCCTGGGTTTCCTACCTCGCAAGCGCGCTCGCCGCCACAGAGGAAAGGTGAAAT
CCTTCCCCAAGGATGATCCTGCAAAGAAGCCCCACCTCACTGCTTTCCTTGGCTACAAAG
CTGGCATGACCCACATTGTGAGGGAGGTGGAGAAGCCTGGATCAAAACTCCACAAGAAGG
AGACATGTGAGGCCGTCACAGTCATTGAGACTCCACCTATGATTGTTGTCGGTCTTGTTG
CATATGTGAAGACTCCTCGTGGGCTGCGAACTTTGACTACCGTGTTTGCCCAGCATTTAA
GTGATGAGTTGAGGAGGCGTTTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCATTCA
CCAAGTACTCCAAGAAGTTTGAACAGGAGGAGGGTAAGAAGGACATAGAATCTGAACTCG
AGAAGATGAAGAAATACGGGAGTGTCATCCGTGTGCTTGCACACACTCAAGTTAGGAAGC
TGAAAGGAATCAAGCAGAAGAAGGCTCATCTTATGGAGATCCAGGTGAATG
■■Homology search results ■■ -
sp_hit_id P22738
Definition sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis thaliana
Align length 187
Score (bit) 304.0
E-value 2.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956380|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_J11, 5'
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis t...   304   2e-82
sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa sub...   297   2e-80
sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis t...   295   2e-79
sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens GN=...   266   6e-71
sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus ...   263   4e-70
sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicula...   263   4e-70
sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus GN=...   260   3e-69
sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RP...   259   7e-69
sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A OS=Schizosacchar...   252   1e-66
sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B OS=Schizosacchar...   251   1e-66
sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus fumi...   250   3e-66
sp|P34113|RL3_DICDI 60S ribosomal protein L3 OS=Dictyostelium di...   247   3e-65
sp|P59671|RL3_NEUCR 60S ribosomal protein L3 OS=Neurospora crass...   246   8e-65
sp|P49149|RL3_TOXCA 60S ribosomal protein L3 OS=Toxocara canis G...   242   9e-64
sp|O16797|RL3_DROME 60S ribosomal protein L3 OS=Drosophila melan...   238   2e-62
sp|P50880|RL3_CAEEL 60S ribosomal protein L3 OS=Caenorhabditis e...   237   4e-62
sp|Q9NBK4|RL3_CAEBR 60S ribosomal protein L3 OS=Caenorhabditis b...   235   1e-61
sp|Q92901|RL3L_HUMAN 60S ribosomal protein L3-like OS=Homo sapie...   235   1e-61
sp|Q3SZ10|RL3L_BOVIN 60S ribosomal protein L3-like OS=Bos taurus...   234   2e-61
sp|Q759R7|RL3_ASHGO 60S ribosomal protein L3 OS=Ashbya gossypii ...   233   5e-61
sp|Q6BXM5|RL3_DEBHA 60S ribosomal protein L3 OS=Debaryomyces han...   231   3e-60
sp|Q6FTJ2|RL3_CANGA 60S ribosomal protein L3 OS=Candida glabrata...   230   3e-60
sp|Q6CJR7|RL3_KLULA 60S ribosomal protein L3 OS=Kluyveromyces la...   229   1e-59
sp|P14126|RL3_YEAST 60S ribosomal protein L3 OS=Saccharomyces ce...   228   2e-59
sp|Q8SQI3|RL3_ENCCU 60S ribosomal protein L3 OS=Encephalitozoon ...   139   8e-33
sp|O26110|RL3_METTH 50S ribosomal protein L3P OS=Methanobacteriu...   100   9e-21
sp|Q2NFV6|RL3_METST 50S ribosomal protein L3P OS=Methanosphaera ...    97   6e-20
sp|Q3IMY8|RL3_NATPD 50S ribosomal protein L3P OS=Natronomonas ph...    97   8e-20
sp|Q6LX10|RL3_METMP 50S ribosomal protein L3P OS=Methanococcus m...    97   8e-20
sp|A6VHD2|RL3_METM7 50S ribosomal protein L3P OS=Methanococcus m...    97   8e-20

>sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis
           thaliana GN=ARP2 PE=2 SV=4
          Length = 390

 Score =  304 bits (778), Expect = 2e-82
 Identities = 147/187 (78%), Positives = 162/187 (86%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K   LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPPM+VVG+V YVKTPRGLR+L TV+AQHLS+ELRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E EEGKKDI+S+LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           L EIQ+N
Sbjct: 181 LNEIQIN 187


>sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp.
           japonica GN=RPL3 PE=2 SV=2
          Length = 389

 Score =  297 bits (761), Expect = 2e-80
 Identities = 138/187 (73%), Positives = 163/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFPKDD +K  HLT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQ+N
Sbjct: 181 LMEIQIN 187


>sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis
           thaliana GN=ARP1 PE=2 SV=5
          Length = 389

 Score =  295 bits (754), Expect = 2e-79
 Identities = 140/187 (74%), Positives = 160/187 (85%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD  K    TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETP M+VVG+VAYVKTPRGLR+L TV+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + E+GKK I+++LEKMKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           +MEIQ+N
Sbjct: 181 MMEIQIN 187


>sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens
           GN=RPL3 PE=1 SV=2
          Length = 403

 Score =  266 bits (680), Expect = 6e-71
 Identities = 128/187 (68%), Positives = 150/187 (80%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK++KKE  EAVT++ETPPM+VVG+V YV+TPRGLRT  TVFA+H+SDE +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + E+GKK +E +   MKKY  VIRV+AHTQ+R L  ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 180 LMEIQVN 186


>sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus
           GN=Rpl3 PE=1 SV=3
          Length = 403

 Score =  263 bits (673), Expect = 4e-70
 Identities = 126/187 (67%), Positives = 149/187 (79%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK++KKE  EAVT++ETPPM+VVG+V YV+TPRGLRT  TVFA+H+SDE +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + + GKK +E +   MKKY  VIR++AHTQ+R L  ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 180 LMEIQVN 186


>sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicularis
           GN=RPL3 PE=2 SV=3
          Length = 403

 Score =  263 bits (673), Expect = 4e-70
 Identities = 127/187 (67%), Positives = 149/187 (79%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK++KKE   AVT++ETPPM+VVG+V YV+TPRGLRT  TVFA+H+SDE +RRFYK
Sbjct: 61  DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + E+GKK +E +   MKKY  VIRV+AHTQ+R L  ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 180 LMEIQVN 186


>sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus
           GN=Rpl3 PE=2 SV=2
          Length = 403

 Score =  260 bits (665), Expect = 3e-69
 Identities = 125/187 (66%), Positives = 148/187 (79%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK++KKE  EAVT++ETPPM+VVG+V YV+TPRGLRT  TVFA+H+SDE +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + + GKK +E +   MKKY  VIR++AHTQ+R L  ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 180 LMEIQVN 186


>sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RPL3
           PE=1 SV=2
          Length = 403

 Score =  259 bits (662), Expect = 7e-69
 Identities = 123/187 (65%), Positives = 148/187 (79%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKF  PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK++KKE  EAVT++ETPPM++VG+V YV+TPRGLRT  T+FA+H+SDE +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               +  +GKK +E +   MKKY  VIRV+AHTQ+R L  ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 570 LMEIQVN 590
           LME+QVN
Sbjct: 180 LMEVQVN 186


>sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A
           OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2
          Length = 388

 Score =  252 bits (643), Expect = 1e-66
 Identities = 126/187 (67%), Positives = 150/187 (80%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSH KFE PRHGSLGFLPRKRA R RGKVK+FPKDD +K  HLTAFLGYKAGMTHIVR++
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK+HK+E  EAVTVIETPPM+VVG+V YV+TPRGLR+LTTV+A+HLS+E++RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               +  E  + I  ELE++KKY SV+RVLAHTQ+RK   + QKKAH
Sbjct: 121 NW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 178 LMEIQVN 184


>sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B
           OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2
          Length = 388

 Score =  251 bits (642), Expect = 1e-66
 Identities = 125/187 (66%), Positives = 150/187 (80%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSH KFE PRHGSLGFLPRKRA R RGKVK+FPKDD +K  HLTAFLGYKAGMTHIVR++
Sbjct: 1   MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           ++PGSK+HK+E  EAVT+IETPPM+VVG+V YV+TPRGLR+LTTV+A+HLS+E++RRFYK
Sbjct: 61  DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               +  E  + I  ELE++KKY SV+RVLAHTQ+RK   + QKKAH
Sbjct: 121 NW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 178 LMEIQVN 184
tr_hit_id A9TUZ9
Definition tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 187
Score (bit) 313.0
E-value 4.0e-84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956380|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_J11, 5'
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella paten...   313   4e-84
tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella paten...   313   6e-84
tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella paten...   310   5e-83
tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea...   307   3e-82
tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromos...   306   6e-82
tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2...   305   2e-81
tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia GN...   303   4e-81
tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea...   303   4e-81
tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea m...   301   1e-80
tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacu...   301   2e-80
tr|A7R7U1|A7R7U1_VITVI Chromosome undetermined scaffold_2025, wh...   301   2e-80
tr|Q6SKP4|Q6SKP4_SOLLC Ribosomal protein L3 OS=Solanum lycopersi...   301   2e-80
tr|Q2VCJ2|Q2VCJ2_SOLTU Ribosomal protein L3-like OS=Solanum tube...   301   2e-80
tr|A9PB80|A9PB80_POPTR Putative uncharacterized protein OS=Popul...   300   3e-80
tr|A5BAZ0|A5BAZ0_VITVI Putative uncharacterized protein OS=Vitis...   300   4e-80
tr|A9PCQ3|A9PCQ3_POPTR Putative uncharacterized protein OS=Popul...   300   5e-80
tr|A9P806|A9P806_POPTR Putative uncharacterized protein OS=Popul...   300   5e-80
tr|Q6V959|Q6V959_WHEAT Ribosomal protein L3 (Ribosomal protein L...   298   1e-79
tr|Q7X748|Q7X748_WHEAT Ribosomal protein L3 (Ribosomal protein L...   298   2e-79
tr|Q7X744|Q7X744_WHEAT Ribosomal protein L3 (Ribosomal protein L...   298   2e-79
tr|A1YE28|A1YE28_WHEAT Ribosomal protein L3-A2-II OS=Triticum ae...   298   2e-79
tr|Q0IPU6|Q0IPU6_ORYSJ Os12g0167900 protein OS=Oryza sativa subs...   297   3e-79
tr|A2ZIF8|A2ZIF8_ORYSI Putative uncharacterized protein OS=Oryza...   297   3e-79
tr|A1YE34|A1YE34_WHEAT Ribosomal protein L3-B2 OS=Triticum aesti...   296   4e-79
tr|Q53JG0|Q53JG0_ORYSJ 60S ribosomal protein L3, putative, expre...   295   1e-78
tr|A7Y7Q9|A7Y7Q9_PRUDU Putative 60S ribosomal protein L3 (Fragme...   295   1e-78
tr|A5D934|A5D934_ORYSA Ribosomal protein L3B OS=Oryza sativa GN=...   295   1e-78
tr|A2ZBV5|A2ZBV5_ORYSI Putative uncharacterized protein OS=Oryza...   295   1e-78
tr|Q0WLE7|Q0WLE7_ARATH Putative uncharacterized protein At1g4317...   295   2e-78
tr|Q8H154|Q8H154_ARATH Putative ribosomal protein OS=Arabidopsis...   293   5e-78

>tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_225706 PE=3 SV=1
          Length = 392

 Score =  313 bits (803), Expect = 4e-84
 Identities = 151/187 (80%), Positives = 165/187 (88%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDDP KKPHLT+FLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT++ETPP+IVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E EEGK+D++SELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 570 LMEIQVN 590
           L EIQVN
Sbjct: 181 LAEIQVN 187


>tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234838 PE=3 SV=1
          Length = 392

 Score =  313 bits (801), Expect = 6e-84
 Identities = 152/187 (81%), Positives = 164/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDD +K PHLT+FLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT++ETPPMIVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 570 LMEIQVN 590
           L EIQVN
Sbjct: 181 LAEIQVN 187


>tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_190959 PE=3 SV=1
          Length = 392

 Score =  310 bits (793), Expect = 5e-83
 Identities = 150/187 (80%), Positives = 164/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKD  +K+PHLT+FLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT++ETPPM+VVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 570 LMEIQVN 590
           L EIQVN
Sbjct: 181 LAEIQVN 187


>tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 389

 Score =  307 bits (787), Expect = 3e-82
 Identities = 147/187 (78%), Positives = 165/187 (88%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DD +K   LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPPM++VG+VAY+KTPRGLRTL TV+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + EEGKKDI++ELEKMKKY +VIRVLAHTQ++K+KG+KQKKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187


>tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromosome
           chr18 scaffold_59, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00031743001 PE=3 SV=1
          Length = 389

 Score =  306 bits (784), Expect = 6e-82
 Identities = 146/187 (78%), Positives = 164/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP+K   LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT++ETPPM++VG+VAYVKTPRGLR+L TV+AQHLS+E++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E EEGKK I+++LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187


>tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2
           SV=1
          Length = 389

 Score =  305 bits (780), Expect = 2e-81
 Identities = 145/187 (77%), Positives = 163/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DDP K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187


>tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia
           GN=rl3 PE=2 SV=1
          Length = 388

 Score =  303 bits (777), Expect = 4e-81
 Identities = 143/187 (76%), Positives = 162/187 (86%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K P LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCE VT+IETPPM+VVG+V YVKTPRGLRTL TV+ QHLS+E++RRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E +EGKK+I+++LEK+KKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           +MEIQVN
Sbjct: 181 IMEIQVN 187


>tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 389

 Score =  303 bits (777), Expect = 4e-81
 Identities = 144/187 (77%), Positives = 163/187 (87%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DDP+K   LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPPM++VG+V Y+KTPRGLRTL  V+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               + EEGKK+I++ELEKMKKY +VIRVLAHTQ++K+KG+KQ KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187


>tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 389

 Score =  301 bits (772), Expect = 1e-80
 Identities = 144/187 (77%), Positives = 162/187 (86%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DD  K  HLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187


>tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacum
           GN=RPL3A PE=2 SV=1
          Length = 389

 Score =  301 bits (771), Expect = 2e-80
 Identities = 144/187 (77%), Positives = 161/187 (86%)
 Frame = +3

Query: 30  MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 209
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K   LTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 210 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 389
           EKPGSKLHKKETCEAVT+IETPPM++VG+V YVKTPRGLR L TV+AQHLS+EL+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 390 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 569
           NW               E +EGKKDI+++LEK+KKY  VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 570 LMEIQVN 590
           LMEIQVN
Sbjct: 181 LMEIQVN 187