DK956381 |
Clone id |
TST39A01NGRL0025_J12 |
Library |
TST39 |
Length |
613 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_J12. 5' end sequence. |
Accession |
DK956381 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL117Contig1 |
Sequence |
GTCATCTGTGCTTTGTGGTGAAGAAGCGGACATCAGCGAGTGCAGGAGCGCTGCAGCTAT GGCGGCCCAGCAGATGAGCAAGAAGCGCAAGTTTGTGGCAGATGGCGTTTTTTTTGCCGA GTTGAACGAAGTTCTCACGCGAGAGCTTGCTGAAGATGGGTACTCTGGCGTAGAGGTCCG GGTTACACCCATGCGAACTGAAATCATTATTCGTGCAACAAGGACCCAGAATGTGCTTGG GGATAAGGGGAGAAGAATCAGAGAGTTAACATCTTTGGTTCAGAAGAGGTTTAACTTTCC TGAAGGCACCGTTGAATTGTATGCTGAGAAAGTTAACAATCGGGGTCTTTGTGCTATTGC ACAAGCAGAGTCACTCCGTTACAAGCTTCTTGGAGGGCTTGCTGTCAGAAGGGCTTGCTA TGGTGTCCTAAGGTTTGTCATGGAGAGTGGCGCGAAGGGTTGTGAGGTCATTGTGAGTGG TAAGCTGAGAGCCCAGCGAGCGAAGTCGATGAAGTTCAAAGATGGGTATATGATTTCCTC TGGGCATCCTGTGAACTTGTACATTGACTCTGCAGTTCGCCACGTGCTTTTGAGACAGGG AGTCTTGGGCATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M339 |
Definition |
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
318.0 |
E-value |
2.0e-86 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHH2 |
Definition |
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
175 |
Score (bit) |
335.0 |
E-value |
1.0e-90 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956381|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_J12, 5' (613 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 335 1e-90 tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 332 1e-89 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 331 2e-89 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 331 2e-89 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 331 2e-89 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 331 2e-89 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 327 4e-88 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 326 8e-88 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 326 8e-88 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 324 2e-87 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 323 5e-87 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 323 6e-87 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 323 6e-87 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 322 8e-87 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 322 1e-86 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 322 1e-86 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 322 1e-86 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 322 1e-86 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 320 3e-86 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 320 4e-86 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 320 4e-86 tr|Q1WLZ2|Q1WLZ2_CHLIN 40S ribosomal protein S3 OS=Chlamydomonas... 317 3e-85 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 317 5e-85 tr|A8I4P5|A8I4P5_CHLRE Ribosomal protein S3 OS=Chlamydomonas rei... 313 7e-84 tr|Q1XGD5|Q1XGD5_LAMJA Ribosomal protein S3 (Fragment) OS=Lampet... 303 4e-81 tr|Q9D0A2|Q9D0A2_MOUSE Putative uncharacterized protein OS=Mus m... 303 7e-81 tr|Q7ZYT3|Q7ZYT3_XENLA Ribosomal protein S1a protein OS=Xenopus ... 301 2e-80 tr|Q6P8G2|Q6P8G2_XENTR Ribosomal protein S3 OS=Xenopus tropicali... 301 2e-80 tr|Q5ZJC1|Q5ZJC1_CHICK Putative uncharacterized protein OS=Gallu... 301 2e-80 tr|B5FZR3|B5FZR3_TAEGU Putative ribosomal protein S3 OS=Taeniopy... 301 2e-80
>tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 335 bits (860), Expect = 1e-90 Identities = 171/175 (97%), Positives = 174/175 (99%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEG VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 186
>tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 332 bits (850), Expect = 1e-89 Identities = 169/175 (96%), Positives = 172/175 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGI 184
>tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 331 bits (849), Expect = 2e-89 Identities = 169/175 (96%), Positives = 172/175 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGI 184
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 331 bits (848), Expect = 2e-89 Identities = 169/175 (96%), Positives = 173/175 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 331 bits (848), Expect = 2e-89 Identities = 169/175 (96%), Positives = 173/175 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 331 bits (848), Expect = 2e-89 Identities = 169/175 (96%), Positives = 173/175 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGI 186
>tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034104001 PE=3 SV=1 Length = 234
Score = 327 bits (837), Expect = 4e-88 Identities = 168/175 (96%), Positives = 170/175 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPE TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 70 TSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 326 bits (835), Expect = 8e-88 Identities = 166/175 (94%), Positives = 171/175 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGI 184
>tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166897 PE=3 SV=1 Length = 231
Score = 326 bits (835), Expect = 8e-88 Identities = 166/175 (94%), Positives = 171/175 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGI 184
>tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016476001 PE=3 SV=1 Length = 234
Score = 324 bits (831), Expect = 2e-87 Identities = 165/175 (94%), Positives = 170/175 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPE +VELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 613 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
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