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NBDC - LSDB Archive
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DK956391
Clone id TST39A01NGRL0025_J22
Library
Length 623
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_J22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTAGCATCCCAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGTTTCTCTCTGC
AAGGAGTGTCGCAATGGCAGCTGCCACAGTGCTCTCTTCCTCATTTGTGGGGCAAGCCTC
TCTTCTGCGGGAGAGCAATGAGCTGTCCAGCAGGGTAACGGCAGGCGAGGCCCGCGTGCA
GATGAGGTCCTCGAAGAAGTCGGCACCCTCGGGTAGCATCTGGTATGGCGCCGACCGCCC
TCTCTACTTGGGCCCTTTTTCAGGCTCTCCCCCATCCTACCTGACGGGTGAGTTCCCCGG
TGACTACGGCTGGGACACCGCCGGACTGTCCGCCGACCCTGAAACGTTCGCCAAGAACCG
AGAACTAGAGGTTATCCACGCCAGATGGGCCATGCTGGGCGCCCTGGGCTGCGTCACCCC
TGAGCTGCTGGCCAAGAACGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCCGGCTC
TCAGATCTTCGCCGACGGCGGCCTGGACTACCTAGGCAACCCCAGCCTGGTGCACGCGCA
GAGCATCCTCGCCATCTGGGCCTGCCAGGTCATTCTCATGGGCGCTGTGGAGGGCTACCG
AGTCGCCGGCGGCCCGTTGGGCG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 184
Score (bit) 309.0
E-value 9.0e-84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956391|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_J22, 5'
         (623 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   309   9e-84
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   282   9e-76
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   282   9e-76
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   281   2e-75
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   281   2e-75
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   280   4e-75
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   279   7e-75
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   279   7e-75
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   279   7e-75
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   278   1e-74
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   278   1e-74
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   278   2e-74
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   277   3e-74
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   277   4e-74
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   277   4e-74
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   276   5e-74
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   276   5e-74
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   276   8e-74
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   276   8e-74
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   275   1e-73
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   274   2e-73
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   274   2e-73
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   273   5e-73
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   273   5e-73
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   272   9e-73
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   272   1e-72
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   272   1e-72
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   272   1e-72
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   271   2e-72
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   271   2e-72

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  309 bits (791), Expect = 9e-84
 Identities = 154/184 (83%), Positives = 162/184 (88%), Gaps = 1/184 (0%)
 Frame = +2

Query: 74  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 250
           MA +T  L+S+F GQ             V AGEARVQM + K  APSGSIWYG+DRPLYL
Sbjct: 1   MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 251 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 430
           GPFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 431 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 610
           AKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 611 GPLG 622
           GPLG
Sbjct: 179 GPLG 182


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  282 bits (722), Expect = 9e-76
 Identities = 143/186 (76%), Positives = 152/186 (81%), Gaps = 3/186 (1%)
 Frame = +2

Query: 74  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 244
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 245 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 424
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 425 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 604
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 176

Query: 605 AGGPLG 622
           AGGPLG
Sbjct: 177 AGGPLG 182


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  282 bits (722), Expect = 9e-76
 Identities = 137/183 (74%), Positives = 148/183 (80%)
 Frame = +2

Query: 74  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 253
           MA   +  S+FVGQA               GE R+ MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ-SIWYGEDRPKYLG 59

Query: 254 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 433
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 434 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 613
           KNGVKFGEAVWFKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQV+LMG VEGYRV GG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGG 179

Query: 614 PLG 622
           PLG
Sbjct: 180 PLG 182


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  281 bits (719), Expect = 2e-75
 Identities = 134/157 (85%), Positives = 143/157 (91%), Gaps = 4/157 (2%)
 Frame = +2

Query: 164 GEARVQMRSS----KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 331
           GEARV MR +    K +A SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 332 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 511
           ADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 512 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 622
           LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLG
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLG 182


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  281 bits (719), Expect = 2e-75
 Identities = 142/189 (75%), Positives = 155/189 (82%), Gaps = 6/189 (3%)
 Frame = +2

Query: 74  MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGAD 235
           MA++T+  SS  F G+A             + GEARV MR +    K +A SGS WYG D
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSS-------SFGEARVTMRKTAAKAKPAAASGSPWYGPD 53

Query: 236 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 415
           R LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 54  RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

Query: 416 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 595
            PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEG
Sbjct: 114 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 173

Query: 596 YRVAGGPLG 622
           YR+AGGPLG
Sbjct: 174 YRIAGGPLG 182


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  280 bits (716), Expect = 4e-75
 Identities = 140/183 (76%), Positives = 147/183 (80%)
 Frame = +2

Query: 74  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 253
           MA +T+  S+F GQ             V     RV MR + KSAP  SIWYG DRP YLG
Sbjct: 1   MATSTIQQSAFAGQTLLKPQNELVRK-VGGNGGRVSMRRTIKSAPE-SIWYGPDRPKYLG 58

Query: 254 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 433
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA
Sbjct: 59  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118

Query: 434 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 613
           KNGVKFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GG
Sbjct: 119 KNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGG 178

Query: 614 PLG 622
           PLG
Sbjct: 179 PLG 181


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  279 bits (714), Expect = 7e-75
 Identities = 139/185 (75%), Positives = 155/185 (83%), Gaps = 2/185 (1%)
 Frame = +2

Query: 74  MAAATVL-SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 247
           MAAAT + S++  GQ+            +   EARV MR +  KSA S +IWYGADRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 248 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 427
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 428 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 607
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 608 GGPLG 622
           GGPLG
Sbjct: 181 GGPLG 185



 Score = 31.2 bits (69), Expect = 4.5
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 260 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKN 439
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 440 G 442
           G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  279 bits (714), Expect = 7e-75
 Identities = 142/188 (75%), Positives = 155/188 (82%), Gaps = 5/188 (2%)
 Frame = +2

Query: 74  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 238
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 239 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 418
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 419 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 598
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGY
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGY 174

Query: 599 RVAGGPLG 622
           R+AGGPLG
Sbjct: 175 RIAGGPLG 182


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  279 bits (714), Expect = 7e-75
 Identities = 135/183 (73%), Positives = 147/183 (80%)
 Frame = +2

Query: 74  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 253
           MA + +  S+F GQ                G  RV MR + KSAP+ SIWYG DRP YLG
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPT-SIWYGPDRPKYLG 59

Query: 254 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 433
           PFS   PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+
Sbjct: 60  PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 434 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 613
           KNGVKFGEAVWFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRV GG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGG 179

Query: 614 PLG 622
           PLG
Sbjct: 180 PLG 182


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  278 bits (712), Expect = 1e-74
 Identities = 141/188 (75%), Positives = 151/188 (80%), Gaps = 5/188 (2%)
 Frame = +2

Query: 74  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 238
           MAA T+   SSSF G+A               G+ARV MR +    K   S S WYG+DR
Sbjct: 1   MAATTMSLSSSSFAGKAVKNLPSS-----ALIGDARVNMRKTAAKAKQVSSSSPWYGSDR 55

Query: 239 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 418
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 115

Query: 419 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 598
           PELLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGY
Sbjct: 116 PELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGY 175

Query: 599 RVAGGPLG 622
           R+AGGPLG
Sbjct: 176 RIAGGPLG 183
tr_hit_id Q9M600
Definition tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia esula
Align length 186
Score (bit) 285.0
E-value 1.0e-75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956391|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_J22, 5'
         (623 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   285   1e-75
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   284   3e-75
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   284   3e-75
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   283   6e-75
tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossyp...   283   6e-75
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   283   6e-75
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   283   6e-75
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   283   8e-75
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   282   1e-74
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   282   1e-74
tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment...   282   1e-74
tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding ...   282   1e-74
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   282   1e-74
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   281   2e-74
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   281   2e-74
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   281   2e-74
tr|Q41423|Q41423_SOLTU Chlorophyll a/b binding protein OS=Solanu...   281   2e-74
tr|Q41422|Q41422_SOLTU Chlorophyll a/b binding protein OS=Solanu...   281   2e-74
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   281   2e-74
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   281   2e-74
tr|A2WUJ5|A2WUJ5_ORYSI Putative uncharacterized protein OS=Oryza...   281   2e-74
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   281   3e-74
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   280   4e-74
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   280   4e-74
tr|B4G143|B4G143_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   280   4e-74
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote...   280   5e-74
tr|A7QQL7|A7QQL7_VITVI Chromosome undetermined scaffold_143, who...   280   5e-74
tr|A5BAI4|A5BAI4_VITVI Putative uncharacterized protein (Chromos...   280   5e-74
tr|A5B5I4|A5B5I4_VITVI Putative uncharacterized protein OS=Vitis...   280   5e-74
tr|Q41425|Q41425_SOLTU Chlorophyll a/b binding protein OS=Solanu...   280   6e-74

>tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia
           esula PE=2 SV=1
          Length = 268

 Score =  285 bits (730), Expect = 1e-75
 Identities = 141/186 (75%), Positives = 153/186 (82%), Gaps = 2/186 (1%)
 Frame = +2

Query: 71  AMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR--SSKKSAPSGSIWYGADRPL 244
           A ++  + S SF GQA               G  RV MR  ++KK APSGS WYG DR  
Sbjct: 3   ASSSMALSSPSFAGQAVKLSPSSASELM---GNGRVSMRKAATKKVAPSGSPWYGPDRVK 59

Query: 245 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 424
           YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 60  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 119

Query: 425 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 604
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 120 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 179

Query: 605 AGGPLG 622
           AGGPLG
Sbjct: 180 AGGPLG 185


>tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB
           OS=Triticum aestivum GN=Wcab PE=2 SV=1
          Length = 266

 Score =  284 bits (727), Expect = 3e-75
 Identities = 145/188 (77%), Positives = 154/188 (81%), Gaps = 5/188 (2%)
 Frame = +2

Query: 74  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 238
           MAAAT+   SS+F G+A               GEARV MR +    K   SGS WYGADR
Sbjct: 1   MAAATMSLSSSTFAGKAVKNVPSL-----ALLGEARVTMRKTAAKAKQVSSGSPWYGADR 55

Query: 239 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 418
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVF 115

Query: 419 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 598
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGY
Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 175

Query: 599 RVAGGPLG 622
           RVAGGPLG
Sbjct: 176 RVAGGPLG 183


>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  284 bits (726), Expect = 3e-75
 Identities = 145/189 (76%), Positives = 155/189 (82%)
 Frame = +2

Query: 53  LSARSVAMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGA 232
           ++A +  +++     SS V               V   EARVQM + KKS+ SG+I YGA
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSS-SGNIRYGA 59

Query: 233 DRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGC 412
           DR LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC
Sbjct: 60  DRLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 119

Query: 413 VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVE 592
           VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVE
Sbjct: 120 VTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVE 179

Query: 593 GYRVAGGPL 619
           GYRVA  PL
Sbjct: 180 GYRVAVVPL 188


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  283 bits (724), Expect = 6e-75
 Identities = 139/182 (76%), Positives = 153/182 (84%), Gaps = 1/182 (0%)
 Frame = +2

Query: 80  AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYLGP 256
           AAT ++S+ +               V AGEARV MR +  KS+ S SIWYGADRP +LGP
Sbjct: 4   AATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGP 63

Query: 257 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 436
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 437 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 616
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 183

Query: 617 LG 622
           LG
Sbjct: 184 LG 185


>tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossypium
           hirsutum PE=3 SV=1
          Length = 264

 Score =  283 bits (724), Expect = 6e-75
 Identities = 132/153 (86%), Positives = 139/153 (90%)
 Frame = +2

Query: 164 GEARVQMRSSKKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPE 343
           G  RV MR + K  PSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 29  GTGRVSMRKTTKPVPSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 344 TFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNP 523
           TFA+NRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNP
Sbjct: 89  TFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 148

Query: 524 SLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 622
           SL+HAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 149 SLIHAQSILAIWACQVILMGAVEGYRIAGGPLG 181


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  283 bits (724), Expect = 6e-75
 Identities = 141/183 (77%), Positives = 151/183 (82%)
 Frame = +2

Query: 74  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 253
           MAAAT + S+ +               V   EARV MR   KS+ S SIWYGADRP +LG
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR---KSSGSDSIWYGADRPKFLG 57

Query: 254 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 433
           PFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLA
Sbjct: 58  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLA 117

Query: 434 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 613
           KNGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 177

Query: 614 PLG 622
           PLG
Sbjct: 178 PLG 180


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  283 bits (724), Expect = 6e-75
 Identities = 139/182 (76%), Positives = 153/182 (84%), Gaps = 1/182 (0%)
 Frame = +2

Query: 80  AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYLGP 256
           AAT ++S+ +               V AGEARV MR +  KS+ S SIWYGADRP +LGP
Sbjct: 4   AATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGP 63

Query: 257 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 436
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 437 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 616
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 183

Query: 617 LG 622
           LG
Sbjct: 184 LG 185


>tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
           mays PE=2 SV=1
          Length = 264

 Score =  283 bits (723), Expect = 8e-75
 Identities = 136/156 (87%), Positives = 142/156 (91%), Gaps = 3/156 (1%)
 Frame = +2

Query: 164 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 334
           GE R+ MR +    K A SGS WYGADR LYLGP SGSPPSYLTGEFPGDYGWDTAGLSA
Sbjct: 26  GEGRITMRKTAAKPKPAASGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSA 85

Query: 335 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 514
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 86  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 145

Query: 515 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 622
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 146 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 181


>tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=Lhcb1-2 PE=4 SV=1
          Length = 265

 Score =  282 bits (722), Expect = 1e-74
 Identities = 143/186 (76%), Positives = 152/186 (81%), Gaps = 3/186 (1%)
 Frame = +2

Query: 74  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 244
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 245 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 424
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 425 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 604
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 176

Query: 605 AGGPLG 622
           AGGPLG
Sbjct: 177 AGGPLG 182


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  282 bits (722), Expect = 1e-74
 Identities = 142/186 (76%), Positives = 151/186 (81%), Gaps = 3/186 (1%)
 Frame = +2

Query: 74  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRPL 244
           MA+A V SS+F GQ                GE R+ MR   S K  A SGS WYG DR  
Sbjct: 4   MASAGVASSAFAGQIVLKPQNEFVGG--VHGEGRITMRKTASKKVVASSGSPWYGPDRVK 61

Query: 245 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 424
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 62  YLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 121

Query: 425 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 604
           LL++NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+
Sbjct: 122 LLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 181

Query: 605 AGGPLG 622
           AGGPLG
Sbjct: 182 AGGPLG 187