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NBDC - LSDB Archive
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DK956399
Clone id TST39A01NGRL0025_K06
Library
Length 629
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_K06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGAACTTCTGCGTAAAATTGTCTGTGAGTGTGTAGAGAGGGAGATCGAGCAGGAATGGCC
GCCGCTACTGCTGCCACATCTCTTGCTTCGTCCTTCTTGGGCACCCAGGAGCTCTCAAAC
GGCGTCAAGAGCGTGGGAGTGAGCAATGGGGCGCGTGTGGTAGCGAGGTTTGGGGGCAAG
AAGGGTGCGAAGGCAGCGCCCAGGAAGAGCAGCTCCGCAGGCAGCAAGGATCGGCCTCTG
TGGTACCCCGGCTGCAAGCCCCCCGCATGGCTGGATGGCTCTCTTGTAGGCGACTATGGC
TTCGACCCGCTCTCTCTGGCCAAGCCCGCAGAATATTTGCAGTTCGATTTCGACTCCTTG
AACCAGAACTTGGCCAAGAATTCTGCAGGGGAGATTATTGGAAATCGCGTGGACAGCATC
ACCAACATCAATGCCACTATCCAGCCCTACGCAGAGGCCTTTGGTCTGCAGCGCTTCCGT
GAATGCGAGCTCATCCATGGACGGTGGGCCATGCTTGCTACATTGGGCGCCCTCGCCGTC
GAAGCCTTCACTGGTGTCACATGGCAAGATGCTGGCAAGGGTTGAGCTTGTCGAGGGAGC
TACCTACTTTGGCTTGCCTCTGCCCTTCT
■■Homology search results ■■ -
sp_hit_id Q07473
Definition sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana
Align length 117
Score (bit) 189.0
E-value 5.0e-50
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956399|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_K06, 5'
         (629 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...   189   5e-50
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...   187   2e-49
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl...   176   7e-44
sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chl...   132   5e-31
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    69   3e-11
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    67   6e-11
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    66   2e-10
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    65   2e-10
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    65   3e-10
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    56   2e-07
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    54   9e-07
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    52   2e-06
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    52   3e-06
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    51   4e-06
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    51   6e-06
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    49   3e-05
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    43   0.002
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    41   0.004
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    39   0.017
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    37   0.064
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    37   0.064
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    37   0.064
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...    37   0.064
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    36   0.14 
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    36   0.14 
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    36   0.14 
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...    36   0.14 
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    36   0.14 
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    36   0.14 
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    36   0.14 

>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2
           SV=1
          Length = 290

 Score =  189 bits (480), Expect(2) = 5e-50
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 170



 Score = 29.3 bits (64), Expect(2) = 5e-50
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 170 KVELVDGSSYLGQPLPF 186


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score =  187 bits (476), Expect(2) = 2e-49
 Identities = 86/117 (73%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN  GE+IG R
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTR 110

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            +++   +   QPY+E FGLQRFRECELIHGRWAMLATLGA+ VE  TGVTWQDAGK
Sbjct: 111 TEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGK 167



 Score = 29.3 bits (64), Expect(2) = 2e-49
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 167 KVELVDGSSYLGQPLPF 183


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
           SV=1
          Length = 276

 Score =  176 bits (447), Expect = 7e-44
 Identities = 83/127 (65%), Positives = 94/127 (74%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DR +W+PG  PP WLDGS++GD GFDP  L KPAEYLQ+DFD L+QNLAKN AG+IIG  
Sbjct: 55  DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGII 114

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKG*A 588
            +S        QPY E FG+QRFRECELIHGRWAML TLGA+AVEA TG+ WQDAGK   
Sbjct: 115 QESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVEL 174

Query: 589 CRGSYLL 609
             GS  L
Sbjct: 175 VEGSSYL 181



 Score = 30.4 bits (67), Expect = 7.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELVEG++Y G PLPF
Sbjct: 171 KVELVEGSSYLGQPLPF 187


>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29
           OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
          Length = 280

 Score =  132 bits (332), Expect(2) = 5e-31
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
 Frame = +1

Query: 238 LWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGE---IIGNR 408
           LW P    P WLDGSL GD GFDPL L+KP+E++    D  +QN AKN+ G    I+   
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 111

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            D +++ N  + PY+E FGL RFRECELIHGRWAMLA LGAL  EA TGV+W +AGK
Sbjct: 112 PDEVSSENR-LAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGK 167



 Score = 22.7 bits (47), Expect(2) = 5e-31
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VEL +GA+Y GL LPF
Sbjct: 167 KVEL-DGASYAGLSLPF 182


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = +1

Query: 241 WYPGCK------PPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 402
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 60  WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 100

Query: 403 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAG 576
                                   +RE ELIHGRWAMLA LG    +A+TG+ W +AG
Sbjct: 101 ------------------------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAG 134


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 67.4 bits (163), Expect = 6e-11
 Identities = 40/123 (32%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG  PP WLDGSL GD+GFDPL LA   E L+++                    
Sbjct: 64  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN-------------------- 103

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGV------TWQD 570
                                  ++ EL+H RWAML   G    E  T +      +W  
Sbjct: 104 -----------------------QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYT 140

Query: 571 AGK 579
           AG+
Sbjct: 141 AGE 143


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 39/123 (31%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG  PP WLDGSL GD+GFDPL L    E L+++                    
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWN-------------------- 103

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGV------TWQD 570
                                   + EL+H RWAML   G    E  T +      +W  
Sbjct: 104 -----------------------AQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYT 140

Query: 571 AGK 579
           AG+
Sbjct: 141 AGE 143


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 37/105 (35%), Positives = 46/105 (43%)
 Frame = +1

Query: 262 PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATI 441
           P WLDGSL GDYGFDPL L K   +L++                                
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------- 95

Query: 442 QPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAG 576
                      +RE ELIHGRWAM A LG    +A++G+ W +AG
Sbjct: 96  -----------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG 129


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
 Frame = +1

Query: 241 WYPGCKP------PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 402
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 55  WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 95

Query: 403 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAG 576
                                   +RE ELIHGRWAM A LG    +A++G+ W +AG
Sbjct: 96  ------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG 129


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 38/119 (31%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
 Frame = +1

Query: 241 WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSI 420
           W PG   P +L GSL GD GFDPL LA+  E L++                         
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKW------------------------- 91

Query: 421 TNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGV------TWQDAGK 579
                             F + EL++GRWAML   G L  E FT +       W DAGK
Sbjct: 92  ------------------FVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGK 132
tr_hit_id A9U3M1
Definition tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 159
Score (bit) 192.0
E-value 2.0e-51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956399|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_K06, 5'
         (629 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella paten...   192   2e-51
tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella paten...   191   2e-51
tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana GN=...   189   6e-49
tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medic...   195   2e-48
tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29 OS=P...   192   1e-47
tr|B1N8L8|B1N8L8_BRAOG Chloroplast chlorophyll a/b-binding prote...   192   1e-47
tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subs...   184   2e-47
tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza ...   184   2e-47
tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza...   184   2e-47
tr|O24561|O24561_MAIZE Putative uncharacterized protein OS=Zea m...   182   6e-47
tr|B4FJG1|B4FJG1_MAIZE Putative uncharacterized protein OS=Zea m...   182   7e-47
tr|B7SAW1|B7SAW1_9POAL Chloroplast chlorophyll a/b binding prote...   182   9e-47
tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome...   189   2e-46
tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis...   189   2e-46
tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29 ...   188   2e-46
tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Popul...   188   2e-46
tr|A9PJF0|A9PJF0_POPJC Putative uncharacterized protein OS=Popul...   187   4e-46
tr|B7SB30|B7SB30_BAMOL LHCB4 OS=Bambusa oldhamii PE=2 SV=1            182   5e-46
tr|A9P071|A9P071_PICSI Putative uncharacterized protein OS=Picea...   176   3e-45
tr|A9NYR8|A9NYR8_PICSI Putative uncharacterized protein OS=Picea...   176   3e-45
tr|A9NKX0|A9NKX0_PICSI Putative uncharacterized protein OS=Picea...   176   3e-45
tr|A9PK34|A9PK34_POPJC Putative uncharacterized protein OS=Popul...   182   1e-44
tr|Q7XYQ5|Q7XYQ5_BIGNA Chlorophyll a/b-binding protein CP29 OS=B...   155   2e-36
tr|B5A4H8|B5A4H8_GYMST Chlorophyll a/b binding protein CP29 OS=G...   151   4e-35
tr|A3BL40|A3BL40_ORYSJ Putative uncharacterized protein OS=Oryza...   138   9e-34
tr|Q3B9U8|Q3B9U8_OSTTA Chloroplast chlorophyll a/b-binding prote...   144   3e-33
tr|A4QPJ4|A4QPJ4_ACEAT Chloroplast light-harvesting protein CP29...   142   2e-32
tr|A4S8L5|A4S8L5_OSTLU Possibly CP29, chlorophyll a/b binding OS...   137   4e-31
tr|A8J6D1|A8J6D1_CHLRE Chlorophyll a-b binding protein of photos...   132   6e-30
tr|A2SY24|A2SY24_MESVI Light-harvesting chlorophyll-a/b binding ...   132   7e-30

>tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_228001 PE=4 SV=1
          Length = 296

 Score =  192 bits (487), Expect(2) = 2e-51
 Identities = 99/159 (62%), Positives = 108/159 (67%), Gaps = 7/159 (4%)
 Frame = +1

Query: 124 VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 285
           V+  GV NGARVVAR                          DRPLW+PG + P WLDGSL
Sbjct: 19  VECFGVKNGARVVARSSLGGKAKQVAKQASKTLKKSSGAGADRPLWFPGARAPEWLDGSL 78

Query: 286 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINAT-IQPYAEAF 462
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++IG R+     I  T  QPY+E F
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 463 GLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
           GLQRFRECELIHGRWAMLA LGAL+VEAFTGVTWQDAGK
Sbjct: 139 GLQRFRECELIHGRWAMLAILGALSVEAFTGVTWQDAGK 177



 Score = 35.0 bits (79), Expect(2) = 2e-51
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+GA+YFGLPLPF
Sbjct: 177 KVELVDGASYFGLPLPF 193


>tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_218263 PE=4 SV=1
          Length = 296

 Score =  191 bits (486), Expect(2) = 2e-51
 Identities = 98/159 (61%), Positives = 109/159 (68%), Gaps = 7/159 (4%)
 Frame = +1

Query: 124 VKSVGVSNGARVVARFXXXXXXXXXXXXXXXXXXX------DRPLWYPGCKPPAWLDGSL 285
           V+ +GV NG+RVVARF                          RPLW+PG + P WLDGSL
Sbjct: 19  VERLGVQNGSRVVARFSVPGKAKQAAKAASKAVKKASGSGAGRPLWFPGAQAPEWLDGSL 78

Query: 286 VGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINAT-IQPYAEAF 462
            GDYGFDPLSL K  EYLQ + DSLNQNLAKN AG++IG R+     I  T  QPY+E F
Sbjct: 79  PGDYGFDPLSLGKSPEYLQIELDSLNQNLAKNEAGDVIGTRISKKEEIAPTPFQPYSEVF 138

Query: 463 GLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
           GLQRFRECELIHGRWAMLA LGAL+VEAFTGVTWQDAGK
Sbjct: 139 GLQRFRECELIHGRWAMLAILGALSVEAFTGVTWQDAGK 177



 Score = 35.0 bits (79), Expect(2) = 2e-51
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+GA+YFGLPLPF
Sbjct: 177 KVELVDGASYFGLPLPF 193


>tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana
           GN=At5g01530 PE=2 SV=1
          Length = 290

 Score =  189 bits (480), Expect(2) = 6e-49
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 170



 Score = 29.3 bits (64), Expect(2) = 6e-49
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 170 KVELVDGSSYLGQPLPF 186


>tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 289

 Score =  195 bits (496), Expect = 2e-48
 Identities = 97/156 (62%), Positives = 105/156 (67%)
 Frame = +1

Query: 142 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 321
           SN  R+ ARF                   DRPLW+PG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SNSGRIQARFGFGKKKAAPKKPSRSSPSTDRPLWFPGAKSPEWLDGSLVGDYGFDPFGLG 83

Query: 322 KPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATIQPYAEAFGLQRFRECELIHG 501
           KPAEYLQFD DSL+QNLAKN AG++IG R +     +   QPY+E FGLQRFRECELIHG
Sbjct: 84  KPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHG 143

Query: 502 RWAMLATLGALAVEAFTGVTWQDAGKG*ACRGSYLL 609
           RWAMLATLGAL VE  TGVTWQDAGK     GS  L
Sbjct: 144 RWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYL 179


>tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29
           OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1
          Length = 290

 Score =  192 bits (489), Expect = 1e-47
 Identities = 97/156 (62%), Positives = 104/156 (66%)
 Frame = +1

Query: 142 SNGARVVARFXXXXXXXXXXXXXXXXXXXDRPLWYPGCKPPAWLDGSLVGDYGFDPLSLA 321
           S   R+ ARF                   DRPLWYPG K P WLDGSLVGDYGFDP  L 
Sbjct: 24  SGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG 83

Query: 322 KPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATIQPYAEAFGLQRFRECELIHG 501
           KPAEYLQF+ DSL+QNLAKN AG IIG R +     +   QPY+E FGLQRFRECELIHG
Sbjct: 84  KPAEYLQFELDSLDQNLAKNEAGIIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHG 143

Query: 502 RWAMLATLGALAVEAFTGVTWQDAGKG*ACRGSYLL 609
           RWAMLATLGAL+VE  TGVTWQDAGK     GS  L
Sbjct: 144 RWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 179


>tr|B1N8L8|B1N8L8_BRAOG Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Brassica oleracea var. gemmifera PE=2 SV=1
          Length = 157

 Score =  192 bits (489), Expect = 1e-47
 Identities = 88/117 (75%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLWYPG K P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 23  DRPLWYPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 82

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            +     +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 83  TEEAAPKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 139


>tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subsp.
           japonica GN=P0567H04.14 PE=2 SV=1
          Length = 290

 Score =  184 bits (467), Expect(2) = 2e-47
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 169



 Score = 29.3 bits (64), Expect(2) = 2e-47
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 169 KVELVDGSSYLGQPLPF 185


>tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza
           sativa GN=RCABP69 PE=2 SV=1
          Length = 290

 Score =  184 bits (467), Expect(2) = 2e-47
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 169



 Score = 29.3 bits (64), Expect(2) = 2e-47
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 169 KVELVDGSSYLGQPLPF 185


>tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26463 PE=4 SV=1
          Length = 290

 Score =  184 bits (467), Expect(2) = 2e-47
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 169



 Score = 29.3 bits (64), Expect(2) = 2e-47
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 169 KVELVDGSSYLGQPLPF 185


>tr|O24561|O24561_MAIZE Putative uncharacterized protein OS=Zea mays
           GN=Lhcb4*1 PE=2 SV=1
          Length = 291

 Score =  182 bits (463), Expect(2) = 6e-47
 Identities = 86/117 (73%), Positives = 95/117 (81%)
 Frame = +1

Query: 229 DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 408
           DRPLW+PG   P +LDGSLVGDYGFDP  L KP EYLQF+ DSL+QNLAKN AG IIG R
Sbjct: 54  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPVEYLQFELDSLDQNLAKNEAGGIIGTR 113

Query: 409 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK 579
            +S    +  +QPY+E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGK
Sbjct: 114 FESSEVKSTPLQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGK 170



 Score = 29.3 bits (64), Expect(2) = 6e-47
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 578 RVELVEGATYFGLPLPF 628
           +VELV+G++Y G PLPF
Sbjct: 170 KVELVDGSSYLGQPLPF 186