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NBDC - LSDB Archive
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DK956403
Clone id TST39A01NGRL0025_K10
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_K10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAAAGAAGGGATTTTGGAGAGAGAGAGAGAGAGGCAGGTAGAAAGTTCGAGCAGAGAGAC
ACGTTAGATTAGTTTGCTCGCAGGTGAAAGATCGAGGAAAGTTAGTTGGCCAGCTCGCTT
CTGTGCATAGCTATGGCGGCAGCTGTAGCAAGCTCCTCTTCTGTCTCCTCTCTGCACAGT
GCCGCCCTGTGCCCGTCCTCCTCATCAGCAGCTTCTTCCTTGAAGTCCTGCCCCTCTCTC
TCCTTCGCCCCCTCCAATGGCTCTCGCCTTGTTTGCATGGCCACTAAGAAGGTCTCTTCT
CGGCCCTCCTCCGGCAAGAAGTCGTGGCTTCCCGGGGTTAGGGGAGGTGGCAACCTTGTG
GATCCTGAATGGCTTGATGGATCGCTTCCCGGCGACTATGGCTTTGATCCCCTTGGACTT
GGAAAGGATCCAGCTGCCTTGAAATGGTACCGTGAGGCTGAAATCATCCATGGAAGATGG
GCAATGGCAGCTGTGGTGGGAATCTTTGTGGGGCAAGCATGGAGTGGAGTCCCCTGGTTC
GAAGCTGGAGCTCAACCTG
■■Homology search results ■■ -
sp_hit_id P27524
Definition sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum
Align length 91
Score (bit) 172.0
E-value 1.0e-42
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956403|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_K10, 5'
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   172   1e-42
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   166   7e-41
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   162   8e-40
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    92   2e-18
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    84   4e-16
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    82   2e-15
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    80   5e-15
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    75   3e-13
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    74   4e-13
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    69   1e-11
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    68   4e-11
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    67   5e-11
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   1e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    63   1e-09
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    62   1e-09
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    62   2e-09
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...    62   3e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    61   3e-09
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    61   4e-09
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    61   4e-09
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    61   4e-09
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    61   4e-09
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    61   4e-09
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    61   4e-09
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    61   4e-09
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    60   6e-09
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    60   6e-09
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    60   6e-09

>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  172 bits (436), Expect = 1e-42
 Identities = 75/91 (82%), Positives = 83/91 (91%)
 Frame = +1

Query: 286 KKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEI 465
           K+ +   ++ KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+
Sbjct: 42  KRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL 101

Query: 466 IHGRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           IHGRWAMAAV+GIFVGQAWSG+PWFEAGA P
Sbjct: 102 IHGRWAMAAVLGIFVGQAWSGIPWFEAGADP 132


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  166 bits (420), Expect = 7e-41
 Identities = 72/89 (80%), Positives = 81/89 (91%)
 Frame = +1

Query: 292 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 471
           V++   + KKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 44  VAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 103

Query: 472 GRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           GRWAMAAV+GIFVGQAWSG+PWFEAGA P
Sbjct: 104 GRWAMAAVLGIFVGQAWSGIPWFEAGADP 132


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  162 bits (411), Expect = 8e-40
 Identities = 69/89 (77%), Positives = 80/89 (89%)
 Frame = +1

Query: 292 VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIH 471
           V +  ++ KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IH
Sbjct: 49  VVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIH 108

Query: 472 GRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           GRWAM AV+GIFVGQAW+G+PWFEAGA P
Sbjct: 109 GRWAMLAVLGIFVGQAWTGIPWFEAGADP 137


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
 Frame = +1

Query: 259 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 438
           GSR V  A   V++ P   +  W PG         PEWLDGSLPGD+GFDPLGLG DP +
Sbjct: 50  GSRSV--AVSAVAADPD--RPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPES 99

Query: 439 LKWYREAEIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQ 555
           LKW  +AE++H RWAM    GIF+ +  + +       W+ AG Q
Sbjct: 100 LKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQ 144



 Score = 40.0 bits (92), Expect = 0.008
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 376 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 528
           D   PG   FDPLG G   PA +K  R  EI +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
 Frame = +1

Query: 325 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 504
           W PG         P WLDGSLPGD+GFDPLGL  DP +L+W ++AE++H RWAM    GI
Sbjct: 68  WFPGS------TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121

Query: 505 FVGQAWSGV------PWFEAGAQ 555
           F+ +  + +       W+ AG Q
Sbjct: 122 FIPELLTKIGILNTPSWYTAGEQ 144



 Score = 40.0 bits (92), Expect = 0.008
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +1

Query: 376 DGSLPGDYGFDPLGLGK-DPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 528
           D   PG   FDPLG G   PA +K  R  EI +GR AM AV+G +    ++G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
 Frame = +1

Query: 280 ATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREA 459
           + K  S +  + K  WLPG      L  P++L GSL GD GFDPLGL +DP  LKW+ +A
Sbjct: 42  SAKTSSFKVEAKKGEWLPG------LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQA 95

Query: 460 EIIHGRWAMAAVVGIFVGQAWSGV------PWFEAGAQ 555
           E+++GRWAM  V G+ + + ++ +       W++AG +
Sbjct: 96  ELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKE 133


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +1

Query: 295 SSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHG 474
           S +  + K  WLPG      L  P +L GSLPGD GFDPLGL +DP  L+W+ +AE+++G
Sbjct: 46  SFKVEAKKGEWLPG------LASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG 99

Query: 475 RWAMAAVVGIFVGQAWSGV------PWFEAGAQ 555
           RWAM  V G+ + + ++ +       W+ AG +
Sbjct: 100 RWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKE 132


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 38/74 (51%), Positives = 48/74 (64%)
 Frame = +1

Query: 325 WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGI 504
           W+PG         P +LDGS PGD+GFD LGLG+ PA L+ Y+E+E+IH RWAM AV GI
Sbjct: 49  WMPGQPR------PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGI 102

Query: 505 FVGQAWSGVPWFEA 546
            V +A     W +A
Sbjct: 103 IVPEALGLGNWVKA 116



 Score = 38.9 bits (89), Expect = 0.017
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +1

Query: 403 FDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQA 519
           FDPLG  KDPA  +  +  EI +GR A+ A+VG  V Q+
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           K SWLPG++       P +LDGSL GD GFDPL L +DP  L+W+ +A++++GRWAM  V
Sbjct: 33  KGSWLPGLQS------PAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGV 86

Query: 496 VGIFV 510
            G+ +
Sbjct: 87  AGMLI 91


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 50/149 (33%), Positives = 63/149 (42%), Gaps = 50/149 (33%)
 Frame = +1

Query: 253 SNGSRLVC---MATKKVSSRPS----SGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDP 411
           SN SR        TKK S + +    S +  W PG +       PE+LDGSL GDYGFDP
Sbjct: 24  SNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPGAKS------PEYLDGSLVGDYGFDP 77

Query: 412 LGLGK--------------------------------DPAA-----------LKWYREAE 462
            GLGK                                DP +           L+ +RE E
Sbjct: 78  FGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECE 137

Query: 463 IIHGRWAMAAVVGIFVGQAWSGVPWFEAG 549
           +IHGRWAM A +G    +  +GV W +AG
Sbjct: 138 LIHGRWAMLATLGAITVEWLTGVTWQDAG 166



 Score = 38.1 bits (87), Expect = 0.030
 Identities = 21/47 (44%), Positives = 24/47 (51%)
 Frame = +1

Query: 388 PGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAVVGIFVGQAWSG 528
           PG   FDPLGL  DP      + AEI H R AM   +G  V  A +G
Sbjct: 215 PGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATG 261
tr_hit_id A9RU32
Definition tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 95
Score (bit) 185.0
E-value 2.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956403|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_K10, 5'
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella paten...   185   2e-45
tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24 OS=P...   172   1e-41
tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromos...   171   2e-41
tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24 ...   170   6e-41
tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana GN=...   167   3e-40
tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding ...   167   3e-40
tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Popul...   167   3e-40
tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II p...   167   4e-40
tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II p...   167   4e-40
tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II p...   167   4e-40
tr|A9PK00|A9PK00_POPJC Putative uncharacterized protein OS=Popul...   167   4e-40
tr|A9PGD4|A9PGD4_POPTR Putative uncharacterized protein OS=Popul...   167   4e-40
tr|Q6DV17|Q6DV17_BRARP Lhcb6 protein (Fragment) OS=Brassica rapa...   167   5e-40
tr|B3VV84|B3VV84_POPTN Chloroplast light-harvesting complex II p...   166   1e-39
tr|B3VV80|B3VV80_POPTN Chloroplast light-harvesting complex II p...   165   2e-39
tr|B3VV72|B3VV72_POPTN Chloroplast light-harvesting complex II p...   164   4e-39
tr|B3VV73|B3VV73_POPTN Chloroplast light-harvesting complex II p...   162   9e-39
tr|B3VV82|B3VV82_POPTN Chloroplast light-harvesting complex II p...   160   4e-38
tr|Q7XV11|Q7XV11_ORYSJ Os04g0457000 protein OS=Oryza sativa subs...   154   3e-36
tr|Q01JQ3|Q01JQ3_ORYSA H0523F07.10 protein OS=Oryza sativa GN=H0...   154   3e-36
tr|B8PYF9|B8PYF9_9POAL Chloroplast a/b binding protein cab-PhE11...   154   3e-36
tr|B6T037|B6T037_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   154   3e-36
tr|A2XU61|A2XU61_ORYSI Putative uncharacterized protein OS=Oryza...   154   3e-36
tr|Q41748|Q41748_MAIZE Chlorophyll a/b-binding apoprotein CP24 O...   153   5e-36
tr|B4FXB0|B4FXB0_MAIZE Chlorophyll a-b binding protein CP24 OS=Z...   151   3e-35
tr|Q7M1K7|Q7M1K7_HORVU Chlorophyll a/b-binding protein CP24, pho...    98   3e-19
tr|A9PJQ2|A9PJQ2_POPJC Putative uncharacterized protein OS=Popul...    95   3e-18
tr|A7PDT5|A7PDT5_VITVI Chromosome chr11 scaffold_13, whole genom...    93   9e-18
tr|A5BBT6|A5BBT6_VITVI Putative uncharacterized protein OS=Vitis...    93   9e-18
tr|Q9LMB1|Q9LMB1_ARATH T29M8.2 protein OS=Arabidopsis thaliana G...    93   1e-17

>tr|A9RU32|A9RU32_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_119427 PE=4 SV=1
          Length = 219

 Score =  185 bits (469), Expect = 2e-45
 Identities = 83/95 (87%), Positives = 90/95 (94%), Gaps = 1/95 (1%)
 Frame = +1

Query: 277 MATKKVSSRPSSG-KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYR 453
           MATKKVS+RP++G KKSW+P V+GGGNL DPEWLDGSLPGDYGFDPLGLG+DPAALKWYR
Sbjct: 1   MATKKVSARPAAGGKKSWIPAVKGGGNLTDPEWLDGSLPGDYGFDPLGLGRDPAALKWYR 60

Query: 454 EAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           EAE+IHGRWAMAAVVGIFVGQ WSGVPWFEAGA P
Sbjct: 61  EAELIHGRWAMAAVVGIFVGQGWSGVPWFEAGADP 95


>tr|Q9XQB6|Q9XQB6_PHAAU Chlorophyll a/b-binding protein CP24
           OS=Phaseolus aureus GN=CipCp24 PE=2 SV=2
          Length = 258

 Score =  172 bits (435), Expect = 1e-41
 Identities = 75/81 (92%), Positives = 79/81 (97%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSW+PGVRGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 54  KKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 113

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           +GIFVGQAWSGVPWFEAGA P
Sbjct: 114 LGIFVGQAWSGVPWFEAGADP 134


>tr|A5ASW8|A5ASW8_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_238, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00009554001 PE=4 SV=1
          Length = 257

 Score =  171 bits (433), Expect = 2e-41
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSWLPGV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWLPGVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           VGIFVGQAWSG+PWFEAGA P
Sbjct: 113 VGIFVGQAWSGIPWFEAGAAP 133


>tr|Q0PWS6|Q0PWS6_TOBAC Chloroplast pigment-binding protein CP24
           OS=Nicotiana tabacum GN=Lhcb6 PE=2 SV=1
          Length = 257

 Score =  170 bits (430), Expect = 6e-41
 Identities = 76/101 (75%), Positives = 89/101 (88%), Gaps = 2/101 (1%)
 Frame = +1

Query: 262 SRLVCMATKK--VSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 435
           +R+  +AT K  + +  ++ KKSW+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPA
Sbjct: 33  ARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPA 92

Query: 436 ALKWYREAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
            LKWYREAE+IHGRWAMAAV+GIFVGQAWSG+PWFEAGA P
Sbjct: 93  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADP 133


>tr|Q9XF90|Q9XF90_ARATH Lhcb6 protein OS=Arabidopsis thaliana
           GN=Lhcb6 PE=2 SV=1
          Length = 258

 Score =  167 bits (424), Expect = 3e-40
 Identities = 75/100 (75%), Positives = 86/100 (86%)
 Frame = +1

Query: 259 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 438
           G++ V   T  V++  +  KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA 
Sbjct: 35  GAQRVGRKTLIVAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAF 94

Query: 439 LKWYREAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           LKWYREAE+IHGRWAMAAV+GIFVGQAWSGV WFEAGAQP
Sbjct: 95  LKWYREAELIHGRWAMAAVLGIFVGQAWSGVAWFEAGAQP 134


>tr|Q9LMQ2|Q9LMQ2_ARATH F7H2.16 protein (Chlorophyll A-B binding
           protein) (Lhcb6 protein) (Putative chlorophyll binding
           protein) OS=Arabidopsis thaliana GN=At1g15820/F7H2.16
           PE=2 SV=1
          Length = 258

 Score =  167 bits (424), Expect = 3e-40
 Identities = 75/100 (75%), Positives = 86/100 (86%)
 Frame = +1

Query: 259 GSRLVCMATKKVSSRPSSGKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAA 438
           G++ V   T  V++  +  KKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPA 
Sbjct: 35  GAQRVGRKTLIVAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAF 94

Query: 439 LKWYREAEIIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQP 558
           LKWYREAE+IHGRWAMAAV+GIFVGQAWSGV WFEAGAQP
Sbjct: 95  LKWYREAELIHGRWAMAAVLGIFVGQAWSGVAWFEAGAQP 134


>tr|A9PFP4|A9PFP4_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 257

 Score =  167 bits (424), Expect = 3e-40
 Identities = 72/81 (88%), Positives = 78/81 (96%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSW+P V+GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 53  KKSWIPAVKGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 112

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           +GIFVGQAWSG+PWFEAGA P
Sbjct: 113 LGIFVGQAWSGIPWFEAGADP 133


>tr|B3VV93|B3VV93_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  167 bits (423), Expect = 4e-40
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           VGIFVGQAWSG+PWFEAGA P
Sbjct: 79  VGIFVGQAWSGIPWFEAGADP 99


>tr|B3VV83|B3VV83_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  167 bits (423), Expect = 4e-40
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           VGIFVGQAWSG+PWFEAGA P
Sbjct: 79  VGIFVGQAWSGIPWFEAGADP 99


>tr|B3VV74|B3VV74_POPTN Chloroplast light-harvesting complex II
           protein (Fragment) OS=Populus tremula PE=4 SV=1
          Length = 174

 Score =  167 bits (423), Expect = 4e-40
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = +1

Query: 316 KKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAALKWYREAEIIHGRWAMAAV 495
           KKSW+P V+GGG+ VDPEWLDGSLPGDYGFDPLGLGKDPA LKWYREAE+IHGRWAMAAV
Sbjct: 19  KKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 78

Query: 496 VGIFVGQAWSGVPWFEAGAQP 558
           VGIFVGQAWSG+PWFEAGA P
Sbjct: 79  VGIFVGQAWSGIPWFEAGADP 99