DK956418
Clone id TST39A01NGRL0025_L01
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_L01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTACCGCCGCCCCGTCTGAACCCACCCTAAGAGCTAGCTGATCAGTAGTCGAGCATGGGG
ACTGCACCGTGTGTTTGCTTGGCCCCGCCGCTCGCGCCATGTTTATCGAGAAGCCCCACT
AAGCTCTCTGGTTTCCAGGGCACCTTCCTTGTCGGTTGCTCCTCAGCATCTCTACTCACA
AGGAGATCGCTCAATTACTTGCACAATCACAGAAAGGCCTCTGCTCTCTGCATCAGGAGC
GACAGCAATGGAAGTGCTGATGAGAAGCCACCTTTTGGGTACACAAGAAAGGACGTCCTT
CTGATTGGTCTTGGATTAACCCTTACTGGAGTGGGCCTTAAGTATGGGCTTGAGTTTGCC
GGACTTGATCCTCTCAAAGCCGGCAATGTGGTGCAGCTAGTCATGGTTCTTGGTCTCACT
GTCGGGTGGATTTCCACTTACTTATTTAGGGTCTCTACAAAAGATATGACATATGCCAAG
CAGTTAAGGGACTACGAGAACAAAGTCATACAGAAACGGTTGGAAGAGCTACCTGAAGCG
GAGTTGGAGTCTTTGCTGGCCCAAGTTGAAGAGGAAAAGCAGCAACTAAAAGCAAGACGA
GCGAAAATGTCTAAACCTGAATAGAGATGTGAATAACTGGGCAATTTTCATGTATGATA
■■Homology search results ■■ -
sp_hit_id Q86UK7
Definition sp|Q86UK7|ZN598_HUMAN Zinc finger protein 598 OS=Homo sapiens
Align length 58
Score (bit) 32.3
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956418|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L01, 5'
(659 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86UK7|ZN598_HUMAN Zinc finger protein 598 OS=Homo sapiens GN... 32 2.3
sp|O57415|RREB1_CHICK RAS-responsive element-binding protein 1 O... 31 5.1
sp|Q1XDL3|YCF36_PORYE Uncharacterized protein ycf36 OS=Porphyra ... 31 6.6
sp|Q28295|VWF_CANFA von Willebrand factor OS=Canis familiaris GN... 30 8.6
sp|P70063|T7L1C_XENLA Transcription factor 7-like 1-C OS=Xenopus... 30 8.6
sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein ... 30 8.6

>sp|Q86UK7|ZN598_HUMAN Zinc finger protein 598 OS=Homo sapiens
GN=ZNF598 PE=1 SV=1
Length = 904

Score = 32.3 bits (72), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2

Query: 59 GLHRVFAWPRRSRHVYREAPLSSLVSRAPSLSVAPQHLYSQGDRSITCTITERPLLSA 232
GL +A P R R ++E +LVS P AP L S + S + +P LSA
Sbjct: 466 GLALPYAIPARGRSAFQEEDFPALVSSVPKPGTAPTSLVSAWNSSSSSKKVAQPPLSA 523


>sp|O57415|RREB1_CHICK RAS-responsive element-binding protein 1
OS=Gallus gallus GN=RREB1 PE=2 SV=2
Length = 1615

Score = 31.2 bits (69), Expect = 5.1
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -1

Query: 425 PTVRPRTMTSCTTLPAL---RGSSPANSSPYLRPTPVRVNPRPIRRTSFLVYPKGGFSSA 255
P V PRT+ + +T P L + +SP SP L P P+R+ + +S + G S+
Sbjct: 493 PLVTPRTVVATSTPPPLISAQQASPGCISPSLPPPPLRLIKNSVETSSNSHLSQPGAKSS 552

Query: 254 LPLLSLLMQ 228
P LL+Q
Sbjct: 553 -PSSQLLLQ 560


>sp|Q1XDL3|YCF36_PORYE Uncharacterized protein ycf36 OS=Porphyra
yezoensis GN=ycf36 PE=3 SV=1
Length = 165

Score = 30.8 bits (68), Expect = 6.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2

Query: 533 LKRSWSLCWPKLKRKSSN*K 592
LK SW CWP L R+S N K
Sbjct: 23 LKNSWFFCWPTLSRRSYNKK 42


>sp|Q28295|VWF_CANFA von Willebrand factor OS=Canis familiaris GN=VWF
PE=1 SV=2
Length = 2813

Score = 30.4 bits (67), Expect = 8.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3

Query: 42 SVVEHGDCTVCLLGPAARAMFIEKPH*ALWFPGHLPCRLLLSISTHK 182
S V CT C+ R F+E W P H PC++ +S K
Sbjct: 2247 SCVPEEACTQCISEDGVRHQFLET-----WVPAHQPCQICTCLSGRK 2288


>sp|P70063|T7L1C_XENLA Transcription factor 7-like 1-C OS=Xenopus
laevis GN=tcf7l1-C PE=2 SV=1
Length = 550

Score = 30.4 bits (67), Expect = 8.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -1

Query: 422 TVRPRTMTSCTTLPALRGSSPANSSPYLR-PTPVRVN--PRPIRRTSFLVYPKGGFSSAL 252
T +P + L SP++SS P+PV + RPI TS ++ P G F SAL
Sbjct: 472 TTKPEARALSHSAAFLASKSPSSSSLSGHLPSPVGASLLSRPIPLTSSILSPPGVFPSAL 531

Query: 251 PLLSLL 234
L LL
Sbjct: 532 QALPLL 537


>sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1
OS=Homo sapiens GN=SRRM1 PE=1 SV=2
Length = 904

Score = 30.4 bits (67), Expect = 8.6
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1

Query: 425 PTVRPRT-MTSCTTLPALRGSSPANSSPYLRPTPVRVNPRPIRRTSFLVYPKGGFSSALP 249
P+ RPR TS + P RG A+SSP R +P + RPIRR S PK +A P
Sbjct: 684 PSPRPRAPQTSSSPPPVRRG---ASSSPQRRQSP-SPSTRPIRRVSRTPEPKKIKKAASP 739


tr_hit_id A9NRG2
Definition tr|A9NRG2|A9NRG2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 143
Score (bit) 126.0
E-value 1.0e-27
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956418|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L01, 5'
(659 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NRG2|A9NRG2_PICSI Putative uncharacterized protein OS=Picea... 126 1e-27
tr|A9P076|A9P076_PICSI Putative uncharacterized protein OS=Picea... 126 1e-27
tr|Q8LR94|Q8LR94_ORYSJ Putative uncharacterized protein P0034E02... 121 3e-26
tr|A2WW44|A2WW44_ORYSI Putative uncharacterized protein OS=Oryza... 121 3e-26
tr|A9PID9|A9PID9_POPTR Putative uncharacterized protein OS=Popul... 120 6e-26
tr|A9RRC6|A9RRC6_PHYPA Predicted protein (Fragment) OS=Physcomit... 120 1e-25
tr|A7PH99|A7PH99_VITVI Chromosome chr17 scaffold_16, whole genom... 118 4e-25
tr|B6U2R8|B6U2R8_MAIZE Putative uncharacterized protein OS=Zea m... 117 6e-25
tr|B4FKC6|B4FKC6_MAIZE Putative uncharacterized protein OS=Zea m... 117 6e-25
tr|Q9LVH7|Q9LVH7_ARATH Dbj|BAA18124.1 OS=Arabidopsis thaliana PE... 112 2e-23
tr|Q94BY7|Q94BY7_ARATH AT3g17930/MEB5_15 OS=Arabidopsis thaliana... 112 2e-23
tr|Q8LDI7|Q8LDI7_ARATH Putative uncharacterized protein OS=Arabi... 112 2e-23
tr|A8JD41|A8JD41_CHLRE Predicted protein OS=Chlamydomonas reinha... 88 5e-16
tr|A4S6K2|A4S6K2_OSTLU Predicted protein OS=Ostreococcus lucimar... 87 1e-15
tr|Q00X05|Q00X05_OSTTA Homology to unknown gene OS=Ostreococcus ... 78 4e-13
tr|B7FZY4|B7FZY4_PHATR Predicted protein OS=Phaeodactylum tricor... 71 7e-11
tr|Q10W94|Q10W94_TRIEI Putative uncharacterized protein OS=Trich... 68 6e-10
tr|B4AV48|B4AV48_9CHRO Putative uncharacterized protein OS=Cyano... 65 3e-09
tr|B5W020|B5W020_SPIMA Putative uncharacterized protein OS=Arthr... 65 5e-09
tr|B4VXS2|B4VXS2_9CYAN Putative uncharacterized protein OS=Micro... 64 1e-08
tr|B1WNQ0|B1WNQ0_CYAA5 Putative uncharacterized protein OS=Cyano... 62 2e-08
tr|B7KCY5|B7KCY5_9CHRO Putative uncharacterized protein OS=Cyano... 62 3e-08
tr|B0JWY6|B0JWY6_MICAN Putative uncharacterized protein OS=Micro... 61 5e-08
tr|A8YEH1|A8YEH1_MICAE Similar to A0YVR4_9CYAN Hypothetical prot... 61 5e-08
tr|Q4BVD6|Q4BVD6_CROWT Putative uncharacterized protein OS=Croco... 61 7e-08
tr|A3ISK8|A3ISK8_9CHRO Putative uncharacterized protein OS=Cyano... 59 3e-07
tr|A0YVR4|A0YVR4_9CYAN Putative uncharacterized protein OS=Lyngb... 58 6e-07
tr|Q8DKZ2|Q8DKZ2_THEEB Tlr0707 protein OS=Thermosynechococcus el... 57 8e-07
tr|Q8YMW4|Q8YMW4_ANASP Alr4810 protein OS=Anabaena sp. (strain P... 57 1e-06
tr|Q5N325|Q5N325_SYNP6 Putative uncharacterized protein OS=Synec... 57 1e-06

>tr|A9NRG2|A9NRG2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 196

Score = 126 bits (317), Expect = 1e-27
Identities = 75/143 (52%), Positives = 87/143 (60%)
Frame = +1

Query: 163 SASLLTRRSLNYLHNHRKASALCIRSDSNGSADEKPPFGYTRKDXXXXXXXXXXXXXXXX 342
++ L + +SL L R SA + SA K PFGYTRKD
Sbjct: 48 NSGLPSSKSLKKL---RLFSAQTEADTTTTSAQGKIPFGYTRKDVLLIGLGLTGFGFGLK 104

Query: 343 XXXEFAGLDPLKAGNVVQLVMVLGLTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRX 522
EF GLD KAGNVVQLVMVLGLTVGWIS+Y+FRVS+KDMTYA+QLRDYENKV+QKR
Sbjct: 105 YGLEFIGLDSTKAGNVVQLVMVLGLTVGWISSYIFRVSSKDMTYAQQLRDYENKVMQKRL 164

Query: 523 XXXXXXXXXXXXAQVEEEKQQLK 591
AQVEEEKQ+L+
Sbjct: 165 EELPEAELEVLLAQVEEEKQRLQ 187


>tr|A9P076|A9P076_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 196

Score = 126 bits (316), Expect = 1e-27
Identities = 68/113 (60%), Positives = 75/113 (66%)
Frame = +1

Query: 253 SADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNVVQLVMVLGLTVGWI 432
SA K PFGYTRKD EF GLD KAGNVVQLVMVLGLTVGWI
Sbjct: 75 SAQGKIPFGYTRKDVLLIGLGLTGFGFGLKYGLEFIGLDSTKAGNVVQLVMVLGLTVGWI 134

Query: 433 STYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVEEEKQQLK 591
S+Y+FRVS+KDMTYA+QLRDYENKV+QKR AQVEEEKQ+L+
Sbjct: 135 SSYIFRVSSKDMTYAQQLRDYENKVMQKRLEELPEAELEVLLAQVEEEKQRLQ 187


>tr|Q8LR94|Q8LR94_ORYSJ Putative uncharacterized protein P0034E02.54
(Putative uncharacterized protein) (Os01g0805200
protein) OS=Oryza sativa subsp. japonica GN=P0034E02.54
PE=4 SV=1
Length = 209

Score = 121 bits (304), Expect = 3e-26
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Frame = +1

Query: 211 RKASALCIRSDS----NGSADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLK 378
R+ L +RS S N + +EK PFGYTRKD E G+DPL+
Sbjct: 59 RQRRRLVVRSSSSDETNSTTEEKTPFGYTRKDVLLIGVGVTLLGYGLKYGLELVGVDPLQ 118

Query: 379 AGNVVQLVMVLGLTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXX 558
AGN VQL++VLG+TVGWISTY+FRV+ KDMTYA+QLRDYE +V++KR
Sbjct: 119 AGNAVQLIIVLGMTVGWISTYMFRVANKDMTYAQQLRDYEKQVMEKRLESLTEAELQVLL 178

Query: 559 AQVEEEKQQL 588
QVEEEKQ+L
Sbjct: 179 EQVEEEKQRL 188


>tr|A2WW44|A2WW44_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04123 PE=4 SV=1
Length = 209

Score = 121 bits (304), Expect = 3e-26
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Frame = +1

Query: 211 RKASALCIRSDS----NGSADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLK 378
R+ L +RS S N + +EK PFGYTRKD E G+DPL+
Sbjct: 59 RQRRRLVVRSSSSDETNSTTEEKTPFGYTRKDVLLIGVGVTLLGYGLKYGLELVGVDPLQ 118

Query: 379 AGNVVQLVMVLGLTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXX 558
AGN VQL++VLG+TVGWISTY+FRV+ KDMTYA+QLRDYE +V++KR
Sbjct: 119 AGNAVQLIIVLGMTVGWISTYMFRVANKDMTYAQQLRDYEKQVMEKRLESLTEAELQVLL 178

Query: 559 AQVEEEKQQL 588
QVEEEKQ+L
Sbjct: 179 EQVEEEKQRL 188


>tr|A9PID9|A9PID9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 204

Score = 120 bits (302), Expect = 6e-26
Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = +1

Query: 238 SDSNGSADE-KPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNVVQLVMVLG 414
S +GS+D+ K PFGY RKD E+AG+DPL+AGNVVQLV+VLG
Sbjct: 80 SSEDGSSDQGKTPFGYNRKDVLLIGLGVTLLGIGLESGLEYAGVDPLQAGNVVQLVLVLG 139

Query: 415 LTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVEEEKQQ 585
LTVGWISTY+FRVS K+MTYA+QLRDYENKV++KR +VEEEK++
Sbjct: 140 LTVGWISTYIFRVSNKEMTYAQQLRDYENKVMEKRLEGLSEAELEALLERVEEEKRR 196


>tr|A9RRC6|A9RRC6_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_118254 PE=4 SV=1
Length = 116

Score = 120 bits (300), Expect = 1e-25
Identities = 61/112 (54%), Positives = 73/112 (65%)
Frame = +1

Query: 271 PFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNVVQLVMVLGLTVGWISTYLFR 450
PFGYTRKD EF G+DPL+AGNVVQ++MV GLT+GWIS+Y+FR
Sbjct: 1 PFGYTRKDVILIGVGLTAFGVGLKYGLEFFGVDPLRAGNVVQIIMVAGLTIGWISSYVFR 60

Query: 451 VSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVEEEKQQLKARRAK 606
VS KDMTYAKQL+DYENKV++KR AQVEEEK +L+ R K
Sbjct: 61 VSNKDMTYAKQLKDYENKVMEKRLEELPEAELETMLAQVEEEKIRLQQSREK 112


>tr|A7PH99|A7PH99_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017862001
PE=4 SV=1
Length = 127

Score = 118 bits (295), Expect = 4e-25
Identities = 60/106 (56%), Positives = 70/106 (66%)
Frame = +1

Query: 271 PFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNVVQLVMVLGLTVGWISTYLFR 450
PFGY RKD EF G+DPL+AGNVVQLV+VLGLT+GWISTY+FR
Sbjct: 15 PFGYNRKDVLLIGVGVTVLGIGLKSGLEFVGVDPLQAGNVVQLVLVLGLTIGWISTYIFR 74

Query: 451 VSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVEEEKQQL 588
VS K+MTYA+QLRDYENKV+QKR QVEEEK++L
Sbjct: 75 VSNKEMTYAQQLRDYENKVMQKRLEGLTEAELEVLLEQVEEEKRRL 120


>tr|B6U2R8|B6U2R8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 205

Score = 117 bits (293), Expect = 6e-25
Identities = 62/126 (49%), Positives = 77/126 (61%)
Frame = +1

Query: 211 RKASALCIRSDSNGSADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNV 390
R +++ DS EK PFGYTRKD E G+DPL+AGNV
Sbjct: 65 RSSTSESSTDDSQSPKQEKAPFGYTRKDVLLIGLGVTAFGVGLKYGLELLGVDPLQAGNV 124

Query: 391 VQLVMVLGLTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVE 570
VQL++VLG+TVGWISTY+FRV+ KDMTYA QLRDYE +V++KR QVE
Sbjct: 125 VQLLVVLGMTVGWISTYMFRVANKDMTYAHQLRDYEKQVMEKRLESLSEXELQALLEQVE 184

Query: 571 EEKQQL 588
EEKQ++
Sbjct: 185 EEKQRV 190


>tr|B4FKC6|B4FKC6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 205

Score = 117 bits (293), Expect = 6e-25
Identities = 61/126 (48%), Positives = 76/126 (60%)
Frame = +1

Query: 211 RKASALCIRSDSNGSADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNV 390
R +++ DS EK PFGYTRKD E G+DPL+AGNV
Sbjct: 65 RSSTSESSTDDSQSPKQEKAPFGYTRKDVLLIGLGVTAFGVGLKYGLELLGVDPLQAGNV 124

Query: 391 VQLVMVLGLTVGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVE 570
VQL++VLG+TVGWISTY+FRV+ KDMTYA QLRDYE +V++KR QVE
Sbjct: 125 VQLLVVLGMTVGWISTYMFRVANKDMTYAHQLRDYEKQVMEKRLESLSEAELQALLEQVE 184

Query: 571 EEKQQL 588
EEKQ++
Sbjct: 185 EEKQRV 190


>tr|Q9LVH7|Q9LVH7_ARATH Dbj|BAA18124.1 OS=Arabidopsis thaliana PE=4
SV=1
Length = 130

Score = 112 bits (280), Expect = 2e-23
Identities = 55/117 (47%), Positives = 74/117 (63%)
Frame = +1

Query: 241 DSNGSADEKPPFGYTRKDXXXXXXXXXXXXXXXXXXXEFAGLDPLKAGNVVQLVMVLGLT 420
D + + + PFGYTRKD E+ G+DPL+AGN VQL++VLGLT
Sbjct: 14 DDSATKTKTTPFGYTRKDVILIGVGVTALGIGLESGLEYVGVDPLQAGNAVQLILVLGLT 73

Query: 421 VGWISTYLFRVSTKDMTYAKQLRDYENKVIQKRXXXXXXXXXXXXXAQVEEEKQQLK 591
+GWISTY+FRV K+MTYA+QLRDYE++V+QKR AQV+EEK +++
Sbjct: 74 LGWISTYIFRVGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMAQVDEEKTKVE 130