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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956421
Clone id TST39A01NGRL0025_L04
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_L04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTTGTCTCCATTTGAATGCGTGAGAGCATCTTGAGTGTCACTGTTGATGGCTTGCAACC
GGGACAATTGTTGTTCGTGTGCTGGCAAAGCGGAAGAATTGTGCATCAGCAATGGTGATT
CTCTCGGAGCTGAGAGCATGGACTTCGAAGGGGGTGAGCTCCATTGAAGGTTTTCTTTTA
TTTGATGCTTTGTAAACCTATTCTGGCGAAGTATTCGAGCATCTCTGTGTCGAAATTGCG
GATCTGATGTGCTTCATTCCTAGCAAGAAACGATATAATATCTGTATCGTTGATGTAATT
TTTGGTGCTATGATGTTGGTTTTACTCGGCGCGTTGTTGGTGTGCTATGTTTGTCTTCGG
TTTGTGTCGTTCGCGCTCATGGAGTTCTCTTGCGAGGTTGTAATTGGATTGCTAAGTTAA
TTTCAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9NBW1
Definition sp|Q9NBW1|FRIZ4_DROME Frizzled-4 OS=Drosophila melanogaster
Align length 44
Score (bit) 33.1
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956421|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L04, 5'
         (424 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NBW1|FRIZ4_DROME Frizzled-4 OS=Drosophila melanogaster GN=f...    33   0.47 
sp|Q37871|NINE_BP82 Protein ninE OS=Enterobacteria phage 82 GN=n...    31   1.7  
sp|Q47270|NINE_ECOLI Protein ninE homolog from lambdoid prophage...    30   3.0  
sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra ...    30   3.9  
sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=A...    30   4.0  
sp|P50104|STB4_YEAST Probable transcriptional regulatory protein...    30   5.0  
sp|A4R6X5|RT106_MAGGR Histone chaperone RTT106 OS=Magnaporthe gr...    30   5.2  
sp|Q91081|ADRA2_LABOS Alpha-2 adrenergic receptor OS=Labrus ossi...    29   6.8  
sp|P43078|PTPX_CANAL Probable tyrosine-protein phosphatase OS=Ca...    29   8.6  
sp|Q03177|YMZ2_YEAST WD repeat-containing protein YMR102C OS=Sac...    29   8.8  
sp|P40556|YIA6_YEAST Uncharacterized mitochondrial carrier YIL00...    29   8.8  
sp|Q9NXL2|YD003_HUMAN Putative Rho guanine nucleotide exchange f...    29   8.8  
sp|O94762|RECQ5_HUMAN ATP-dependent DNA helicase Q5 OS=Homo sapi...    29   8.8  
sp|A4QST9|IRS4_MAGGR Increased rDNA silencing protein 4 OS=Magna...    29   8.8  
sp|P09081|BCD_DROME Homeotic protein bicoid OS=Drosophila melano...    29   8.8  

>sp|Q9NBW1|FRIZ4_DROME Frizzled-4 OS=Drosophila melanogaster GN=fz4
           PE=2 SV=2
          Length = 705

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
 Frame = -2

Query: 408 SNYNLARELHERERHKPKTNIAHQQR------AE*NQHHSTKNY 295
           SNY+L R +H ++RH P  +   QQ+         +QHHST ++
Sbjct: 629 SNYSLGRSVHHQQRHSPHHHHHQQQQHHQFHPHHNHQHHSTSSH 672


>sp|Q37871|NINE_BP82 Protein ninE OS=Enterobacteria phage 82 GN=ninE
           PE=3 SV=1
          Length = 56

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 197 VYKASNKRKPSMELTPFEVHALSSERITIADAQFFRFASTR 75
           +YK  N+RK   EL P E+  L     ++ D ++ R A+ R
Sbjct: 13  IYKVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARR 53


>sp|Q47270|NINE_ECOLI Protein ninE homolog from lambdoid prophage
           DLP12 OS=Escherichia coli (strain K12) GN=ninE PE=3 SV=1
          Length = 56

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -3

Query: 197 VYKASNKRKPSMELTPFEVHALSSERITIADAQFFRFASTRT 72
           +Y+  N+RK   EL P E+  L     ++ D ++ R A+ R+
Sbjct: 13  IYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRS 54


>sp|P51281|YCF45_PORPU Uncharacterized protein ycf45 OS=Porphyra
           purpurea GN=ycf45 PE=3 SV=1
          Length = 565

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 386 NSMSANDTNRRQT*HTNNAPSKTNIIAPKITSTIQILYRFLLGMKHIRSAIS 231
           N +   DT+   T  T N P   N  + ++ ++IQ LY + L  +HI S IS
Sbjct: 372 NKLENRDTSLLST--TINTPVNINNHSFQVEASIQYLYAYSLSWQHITSVIS 421


>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680
           OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1
          Length = 390

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = -2

Query: 132 QLRE---NHHC*CTILPLCQHTNNNCPGCK 52
           +LRE   NHH  CT +    H N+ CP CK
Sbjct: 350 ELRELPCNHHFHCTCIDKWLHINSRCPLCK 379


>sp|P50104|STB4_YEAST Probable transcriptional regulatory protein
           STB4 OS=Saccharomyces cerevisiae GN=STB4 PE=1 SV=1
          Length = 949

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
 Frame = -3

Query: 413 SNPITTSQENSMSANDTNRR-------QT*HTNNAPSKTN-IIAPKITSTI 285
           +NP   + +NS    DTN R       +  H NN  SK N II  +IT+T+
Sbjct: 250 ANPTVVNMKNSQEDCDTNHRSAICDSAEALHNNNINSKENKIINSQITNTV 300


>sp|A4R6X5|RT106_MAGGR Histone chaperone RTT106 OS=Magnaporthe
           grisea GN=RTT106 PE=3 SV=1
          Length = 468

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 217 EHLCVEIADLMCFIPSKKRYNICI 288
           E L +EI D+   IP +K+YN+C+
Sbjct: 92  EELQLEIKDISVSIPQRKKYNLCL 115


>sp|Q91081|ADRA2_LABOS Alpha-2 adrenergic receptor OS=Labrus
           ossifagus PE=3 SV=1
          Length = 432

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 174 KTFNGAHPLRSPCSQLRENHHC*CTILP 91
           +T NG +   SPC   REN HC C   P
Sbjct: 237 QTENGLNKANSPCHGDRENGHCQCPPTP 264


>sp|P43078|PTPX_CANAL Probable tyrosine-protein phosphatase
           OS=Candida albicans GN=CPP1 PE=3 SV=1
          Length = 597

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = -3

Query: 401 TTSQENSMSANDTNRRQT*HTNNAPSKTNIIAPKITSTIQI---LYRFLLGMKHIRSAIS 231
           T ++E+S+  ND NR++    +  P++T  + P  + T+Q    L+ +   +  I S  S
Sbjct: 90  TITEEDSI--NDINRKEQNSFSIQPNQTPTMLPTSSYTLQRPPGLHEYTSSISSISSTSS 147

Query: 230 TQRCSNTSPE*V-YKASNKRKPS 165
               +  SP  + Y   + RKP+
Sbjct: 148 NSTSAPVSPALINYSPKHSRKPN 170


>sp|Q03177|YMZ2_YEAST WD repeat-containing protein YMR102C
           OS=Saccharomyces cerevisiae GN=YMR102C PE=1 SV=1
          Length = 834

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 315 HHSTKNYINDTDIISFLARN 256
           HHS  +YI +TD ISF A N
Sbjct: 563 HHSNDHYIKNTDYISFHAHN 582
tr_hit_id B4R5Y0
Definition tr|B4R5Y0|B4R5Y0_DROSI GD16161 OS=Drosophila simulans
Align length 38
Score (bit) 38.1
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956421|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L04, 5'
         (424 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4R5Y0|B4R5Y0_DROSI GD16161 OS=Drosophila simulans GN=GD16161...    38   0.22 
tr|B4IHK2|B4IHK2_DROSE GM17477 OS=Drosophila sechellia GN=GM1747...    38   0.22 
tr|Q4E5A5|Q4E5A5_TRYCR Putative uncharacterized protein OS=Trypa...    36   0.82 
tr|B3NXT0|B3NXT0_DROER GG19593 OS=Drosophila erecta GN=GG19593 P...    36   1.1  
tr|B4Q143|B4Q143_DROYA GE17540 OS=Drosophila yakuba GN=GE17540 P...    35   1.8  
tr|Q07Q99|Q07Q99_RHOP5 Methyl-accepting chemotaxis sensory trans...    35   2.4  
tr|A9SAG6|A9SAG6_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.3  
tr|B3NTN6|B3NTN6_DROER GG17634 OS=Drosophila erecta GN=GG17634 P...    33   5.3  
tr|Q6H593|Q6H593_ORYSJ Os09g0386200 protein OS=Oryza sativa subs...    33   7.0  
tr|B8BF24|B8BF24_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|A9RSV2|A9RSV2_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.0  
tr|A4V438|A4V438_DROME Frizzled 4, isoform B OS=Drosophila melan...    33   7.0  
tr|B8M6I9|B8M6I9_9EURO Putative uncharacterized protein OS=Talar...    33   7.0  
tr|B0KS50|B0KS50_PSEPG Amino acid adenylation domain protein OS=...    33   9.1  
tr|B7JVS3|B7JVS3_SYNP8 Putative signal transduction protein with...    33   9.1  
tr|B4BVW0|B4BVW0_9CHRO Putative signal transduction protein with...    33   9.1  
tr|B0X000|B0X000_CULQU Putative uncharacterized protein OS=Culex...    33   9.1  
tr|B1MY08|B1MY08_LEUCK Peptidyl-prolyl cis-trans isomerase OS=Le...    33   9.2  
tr|A9HKD8|A9HKD8_9RHOB Dehydrogenase, putative OS=Roseobacter li...    33   9.2  
tr|B6LDL6|B6LDL6_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  

>tr|B4R5Y0|B4R5Y0_DROSI GD16161 OS=Drosophila simulans GN=GD16161
           PE=4 SV=1
          Length = 652

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = -2

Query: 408 SNYNLARELHERERHKPKTNIAHQQRAE*NQHHSTKNY 295
           SNY+L R +H ++RH P  +  HQQ+ + + HH+ +++
Sbjct: 577 SNYSLGRSVHHQQRHSPHHHHHHQQQHQHHPHHNQQHH 614


>tr|B4IHK2|B4IHK2_DROSE GM17477 OS=Drosophila sechellia GN=GM17477
           PE=4 SV=1
          Length = 557

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = -2

Query: 408 SNYNLARELHERERHKPKTNIAHQQRAE*NQHHSTKNY 295
           SNY+L R +H ++RH P  +  HQQ+ + + HH+ +++
Sbjct: 482 SNYSLGRSVHHQQRHSPHHHHYHQQQHQHHPHHNQQHH 519


>tr|Q4E5A5|Q4E5A5_TRYCR Putative uncharacterized protein
            OS=Trypanosoma cruzi GN=Tc00.1047053506559.250 PE=4 SV=1
          Length = 1559

 Score = 36.2 bits (82), Expect = 0.82
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -1

Query: 154  PPSKSMLSAPRESPLLMHNSSALPAHEQQLSRLQAINS-DTQDALTHSNGD 5
            PPS S+ S PR SP L  +SS+ PA ++    LQAI++ D+ D      GD
Sbjct: 1179 PPSSSLASPPRSSPSLFSSSSS-PATDKHRRVLQAISTVDSSDVAALEKGD 1228


>tr|B3NXT0|B3NXT0_DROER GG19593 OS=Drosophila erecta GN=GG19593 PE=4
           SV=1
          Length = 738

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
 Frame = -1

Query: 373 RTTQTEDKHSTPTTRRVKPTS*HQKLHQRYRYYIVSC*E*STSDPQFRHRDARILRQNRF 194
           R   T  +H  PT+ +V+    HQ  HQ    +            Q +H   +  +Q++ 
Sbjct: 245 RVPMTRQQHPLPTSHQVQQQHQHQHQHQHQHQH-------QHQQQQQQHHHQQQQQQHQM 297

Query: 193 TKHQIKENLQWSSPPSK-SMLSAPRESPLL--MHNSSALPAHEQQLSRLQAINSDTQDAL 23
             HQI        PP K S +S      +L  ++  S+   H    +   A +S +  +L
Sbjct: 298 QHHQIHHQTAPRKPPKKHSEISTTNLRQILNNLNIFSSSTKHSNMATATSASSSSSSASL 357

Query: 22  THSN 11
            H+N
Sbjct: 358 HHAN 361


>tr|B4Q143|B4Q143_DROYA GE17540 OS=Drosophila yakuba GN=GE17540 PE=4
           SV=1
          Length = 708

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 408 SNYNLARELHERERHKPKTNIAHQQRAE*NQHHS 307
           SNY+L R +H ++RH P  +  HQQ  + + HHS
Sbjct: 631 SNYSLGRSVHHQQRHSPHHH-HHQQHQQHHHHHS 663


>tr|Q07Q99|Q07Q99_RHOP5 Methyl-accepting chemotaxis sensory
           transducer OS=Rhodopseudomonas palustris (strain BisA53)
           GN=RPE_1941 PE=3 SV=1
          Length = 568

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -1

Query: 154 PPSKSMLSAPRESPLLMHNSSALPAHEQQLSRL 56
           PP + ++ A  E+ L +HN S LPAH Q+L++L
Sbjct: 63  PPPEYVIEAFLEATLALHNPSNLPAHRQRLAKL 95


>tr|A9SAG6|A9SAG6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163811 PE=4 SV=1
          Length = 641

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 402 YNLARELHERERHKPKTNIAHQQRAE*NQHHSTKNYI 292
           YNLA  + + E H+P+ N+ H+++ +     ST+ Y+
Sbjct: 562 YNLASRIEKLEEHRPQANMLHEEKNKGRNGSSTETYL 598


>tr|B3NTN6|B3NTN6_DROER GG17634 OS=Drosophila erecta GN=GG17634 PE=4
           SV=1
          Length = 705

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 408 SNYNLARELHERERHKPKTNIAHQQRAE*NQHHS 307
           SNY+L R +H ++RH P  +  HQQ+   + HHS
Sbjct: 631 SNYSLGRSVHHQQRHSPH-HQHHQQQHHHHPHHS 663


>tr|Q6H593|Q6H593_ORYSJ Os09g0386200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0048A13.13 PE=4 SV=1
          Length = 547

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +1

Query: 106 SAMVILSELRAWTSKGVSSIEGFLLFDAL*TYSGEVFEHLCVEIADLMCFIP 261
           SA+V+++E  A  ++ V SI G L+ D +   SG+ +E  C++    + F+P
Sbjct: 35  SAVVVVAEEEAPPAEFVCSILGALMADPVILPSGQTYERACLQACAELAFLP 86


>tr|B8BF24|B8BF24_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31222 PE=4 SV=1
          Length = 547

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +1

Query: 106 SAMVILSELRAWTSKGVSSIEGFLLFDAL*TYSGEVFEHLCVEIADLMCFIP 261
           SA+V+++E  A  ++ V SI G L+ D +   SG+ +E  C++    + F+P
Sbjct: 35  SAVVVVAEEEAPPAEFVCSILGALMADPVILPSGQTYERACLQACAELAFLP 86