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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956441
Clone id TST39A01NGRL0025_L24
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_L24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGGCTTTTGCTTGCAGATGGCAAACAACCTCCTTTCTTGAAGGCAGATTGGGACAAGTG
GGTTGATGAAGATGAAGAGAATGAAGTGCCAAGCAATAAATTTGATAACTTCGACTTGGG
GTCTATGAATGATTTCTCGGACTTCAACATGGGAGGCGGGGGAATGGAAGGGTTGGGCGG
TGGAGGTGACGAATCAGATAGCGATGATGAAGATGCTGAAATCAGTACAAAAGAAAACAC
AGAGAGTAAGGTCGATGTGGAAGAGCAGAAGGCTTGAGTCATCACCATCAGTTGAAGTTA
GCCCATGCATGAAAAGCAGGTTCACATTATCAAAGTTATCTTCATGTTCAAAAGACTTCT
TGGGCCTTCATATATCACTTAAAGGATTGCAAATGCGGTGGAGTGGTTCAGGACATATAT
TAGCCGTGTTTGGTTTTCATGGGCTATTTATACAAGCTGAGGGTCTTTGAATCTTTGGGC
TTCTGCAACGTGATTGCCAGCGTTTTGTAGG
■■Homology search results ■■ -
sp_hit_id Q6YYB0
Definition sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica
Align length 49
Score (bit) 41.2
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956441|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L24, 5'
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Or...    41   0.003
sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces ...    37   0.039
sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabi...    36   0.11 
sp|Q7U6V8|Y1228_SYNPX Uncharacterized RNA methyltransferase SYNW...    34   0.33 
sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe G...    33   0.96 
sp|P48017|CHS_SAPMO Chitin synthase OS=Saprolegnia monoica GN=CH...    32   1.6  
sp|Q5DUY0|NU5H_NYCOV NADH-ubiquinone oxidoreductase chain 5 OS=N...    30   6.3  
sp|A8MUX0|KR10D_HUMAN Putative keratin-associated protein 10-lik...    30   8.2  

>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza
           sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1
          Length = 213

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEEN---EVPSNKFDNF----DLGSMNDFSD 129
           D K P F+K DWDKWVDED++     V    F NF     +G M    D
Sbjct: 94  DQKAPHFVKVDWDKWVDEDDDGADVNVDGMDFSNFGGMGGMGGMGGMGD 142


>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces
           cerevisiae GN=SBA1 PE=1 SV=3
          Length = 216

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +1

Query: 19  PFLKADWDKWVDEDEENEVPSNKFD 93
           P++K D+DKWVDEDE++EV +   D
Sbjct: 115 PYIKTDFDKWVDEDEQDEVEAEGND 139


>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773
           OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1
          Length = 150

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   ADGKQPPFLKADWDKWVDEDEE 66
           ++ K  P++K DW+KW DEDEE
Sbjct: 91  SEEKPAPYIKVDWNKWCDEDEE 112


>sp|Q7U6V8|Y1228_SYNPX Uncharacterized RNA methyltransferase
           SYNW1228 OS=Synechococcus sp. (strain WH8102)
           GN=SYNW1228 PE=3 SV=1
          Length = 465

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +2

Query: 41  TSGLMKMKRMKCQAINLITSTWGL*MISRTSTWEAGEWKGWAVEVTNQIAMMKMLKSVQK 220
           +SG     R++ QAI+L     GL             W+GW V V   +   +    +Q 
Sbjct: 11  SSGPRPGLRLELQAIDLDRDGHGL-----------ARWQGWVVVVPGLLPGERAKVQLQ- 58

Query: 221 KTQRVRSMWKSR---RLESSPSVEVSPCM 298
             QR +S W SR   RL+SSP+    PC+
Sbjct: 59  --QRQKSRWLSRISERLDSSPTRRRPPCI 85


>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe
           GN=wos2 PE=2 SV=1
          Length = 186

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 22  FLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFS 126
           +L+ D+D+WVDEDE+   P  +   F  G M D S
Sbjct: 109 WLRTDFDRWVDEDEQEAQP--EVSPFGAGGMPDLS 141


>sp|P48017|CHS_SAPMO Chitin synthase OS=Saprolegnia monoica GN=CHS
           PE=3 SV=1
          Length = 886

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +2

Query: 92  ITSTWGL*MISRTSTWEAGEWKGWAVEVTNQIAMMKMLKSVQKKTQRVRSMWKSR 256
           +T TW L   S  S  E G W     E   + A+   LK  +     V   WK R
Sbjct: 145 LTCTWTLARRSSKSAEELGTWMNTVAEEARKAALPPQLKIARTNVPTVEQAWKGR 199


>sp|Q5DUY0|NU5H_NYCOV NADH-ubiquinone oxidoreductase chain 5
            OS=Nyctotherus ovalis GN=nad5 PE=3 SV=1
          Length = 1849

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
 Frame = -1

Query: 351  PKKSFEHEDNFDNVNLLFMHGLT------STDGDDSSLLLFHIDLTLCVFFCTDFSIFII 190
            P+ ++   D+  ++N L +H  T      S  G  ++LL  H+ L L V FC +F +F++
Sbjct: 1683 PQSTYNFIDSDSSLNSL-LHKFTNLITRWSVQGRFTNLL--HLLLLLIVLFCGEFLVFLV 1739

Query: 189  AI*FVTST 166
               F TST
Sbjct: 1740 TGLFGTST 1747


>sp|A8MUX0|KR10D_HUMAN Putative keratin-associated protein 10-like
           ENSP00000375147 OS=Homo sapiens PE=3 SV=1
          Length = 517

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
 Frame = -1

Query: 483 QSRCRSPKIQRPSACINSP*KP------NTANICPEPL---HRICNPLS 364
           Q  C  P    P+ C++SP +P         ++CPEP+      C PLS
Sbjct: 310 QPICSEPSPCSPAVCVSSPCQPTCYVVKRCPSVCPEPVSCPSTSCRPLS 358
tr_hit_id A7QAJ9
Definition tr|A7QAJ9|A7QAJ9_VITVI Chromosome undetermined scaffold_71, whole genome shotgun sequence OS=Vitis vinifera
Align length 38
Score (bit) 51.2
E-value 3.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956441|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_L24, 5'
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QAJ9|A7QAJ9_VITVI Chromosome undetermined scaffold_71, whol...    51   3e-05
tr|Q1XG56|Q1XG56_CRYJA Putative p23 co-chaperone OS=Cryptomeria ...    51   3e-05
tr|Q9FR34|Q9FR34_SOLLC Ripening regulated protein DDTFR8 OS=Sola...    49   1e-04
tr|B8LMY4|B8LMY4_PICSI Putative uncharacterized protein OS=Picea...    49   1e-04
tr|A9SAJ7|A9SAJ7_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|Q6AT62|Q6AT62_ORYSJ Putative ripening regulated protein (Expr...    47   5e-04
tr|Q0DPX1|Q0DPX1_ORYSJ Os03g0655300 protein OS=Oryza sativa subs...    47   5e-04
tr|A5AKK7|A5AKK7_VITVI Putative uncharacterized protein OS=Vitis...    46   8e-04
tr|A9P1E0|A9P1E0_PICSI Putative uncharacterized protein OS=Picea...    46   0.001
tr|A4R2E2|A4R2E2_MAGGR Putative uncharacterized protein OS=Magna...    46   0.001
tr|Q9FR62|Q9FR62_BRANA P23 OS=Brassica napus GN=p23 PE=2 SV=1          45   0.001
tr|B4FLE3|B4FLE3_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE...    45   0.001
tr|A7QRN1|A7QRN1_VITVI Chromosome undetermined scaffold_151, who...    45   0.002
tr|A7Q0B0|A7Q0B0_VITVI Chromosome chr7 scaffold_42, whole genome...    45   0.002
tr|A9UX65|A9UX65_MONBE Predicted protein OS=Monosiga brevicollis...    44   0.003
tr|Q2GVY4|Q2GVY4_CHAGB Putative uncharacterized protein OS=Chaet...    44   0.003
tr|B6ADP6|B6ADP6_9CRYT Co-chaperone protein SBA1, putative OS=Cr...    44   0.006
tr|A6RFC9|A6RFC9_AJECN Predicted protein OS=Ajellomyces capsulat...    43   0.007
tr|Q3I0N3|Q3I0N3_DACGL P23 OS=Dactylis glomerata PE=2 SV=1             43   0.009
tr|B6T9V0|B6T9V0_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE...    43   0.009
tr|A9SRF6|A9SRF6_PHYPA Predicted protein (Fragment) OS=Physcomit...    43   0.009
tr|A8ITQ1|A8ITQ1_CHLRE p23 co-chaperone of HSP90 system OS=Chlam...    42   0.016
tr|Q8X041|Q8X041_NEUCR Related to Hsp90 associated co-chaperone ...    42   0.016
tr|Q5AXQ9|Q5AXQ9_EMENI Putative uncharacterized protein OS=Emeri...    42   0.016
tr|B2B0C8|B2B0C8_PODAN Predicted CDS Pa_3_8690 OS=Podospora anse...    42   0.016
tr|Q2U5M9|Q2U5M9_ASPOR HSP90 co-chaperone p23 OS=Aspergillus ory...    42   0.021
tr|B8NMC7|B8NMC7_ASPFL Hsp90 binding co-chaperone (Sba1), putati...    42   0.021
tr|Q75M67|Q75M67_ORYSJ Os03g0381300 protein OS=Oryza sativa subs...    41   0.027
tr|Q10KJ6|Q10KJ6_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    41   0.027
tr|B8BA14|B8BA14_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.027

>tr|A7QAJ9|A7QAJ9_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033961001 PE=4 SV=1
          Length = 151

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMN 117
           +GK P FLK DWDKWVDE++ENE     FD+ D   ++
Sbjct: 98  EGKPPVFLKVDWDKWVDEEDENEKVGMDFDDMDFSKLD 135


>tr|Q1XG56|Q1XG56_CRYJA Putative p23 co-chaperone OS=Cryptomeria
           japonica PE=2 SV=1
          Length = 240

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +1

Query: 1   ADGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFS 126
           A+GK P ++K DWDKWVDEDEE+E P+    + D G M DFS
Sbjct: 98  AEGKTPQYIKVDWDKWVDEDEEDEKPAG---DADFGGM-DFS 135


>tr|Q9FR34|Q9FR34_SOLLC Ripening regulated protein DDTFR8 OS=Solanum
           lycopersicum GN=DDTFR8 PE=2 SV=1
          Length = 179

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 24/44 (54%), Positives = 28/44 (63%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFSDFN 135
           +G +P FLK DWDKWVDEDEE+  P     + D G M DFS  N
Sbjct: 94  EGLRPVFLKVDWDKWVDEDEEDSKPE---PDMDFGDM-DFSKLN 133


>tr|B8LMY4|B8LMY4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 157

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = +1

Query: 1   ADGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFS 126
           ++GK  P++K DW+KW DEDEE    S+K D F+L  +ND S
Sbjct: 92  SEGKPAPYIKVDWNKWCDEDEEE---SSKLDAFNLEDINDIS 130


>tr|A9SAJ7|A9SAJ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_182885 PE=4 SV=1
          Length = 156

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMND 120
           +GK PPF+KADW++W+DEDEE E  + K   F++ S  D
Sbjct: 94  EGKAPPFVKADWNRWIDEDEEEE--AGKPAEFNMSSAMD 130


>tr|Q6AT62|Q6AT62_ORYSJ Putative ripening regulated protein
           (Expressed protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBb0023J24.6 PE=4 SV=1
          Length = 152

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 19  PFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFSD 129
           P++K DW+KW DEDEE++ P +  D FD G+  D +D
Sbjct: 98  PYIKVDWNKWCDEDEESDAPVDSDDAFDEGNDRDETD 134


>tr|Q0DPX1|Q0DPX1_ORYSJ Os03g0655300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0655300 PE=4 SV=1
          Length = 154

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 19  PFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFSD 129
           P++K DW+KW DEDEE++ P +  D FD G+  D +D
Sbjct: 100 PYIKVDWNKWCDEDEESDAPVDSDDAFDEGNDRDETD 136


>tr|A5AKK7|A5AKK7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_015756 PE=4 SV=1
          Length = 182

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEEN--EVPSNKFDNFDLGSMN 117
           +GK P FLK DWDKWVDE++EN  E     FD+ D   ++
Sbjct: 102 EGKPPVFLKVDWDKWVDEEDENGREKVGMDFDDMDFSKLD 141


>tr|A9P1E0|A9P1E0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 246

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEENEVPSNKFDNFDLGSMNDFS 126
           +GK P +LK DWDKWVDEDEE+E       + D G M DFS
Sbjct: 94  EGKTPLYLKVDWDKWVDEDEEDEKVGG---DVDFGGM-DFS 130


>tr|A4R2E2|A4R2E2_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_06669 PE=4 SV=1
          Length = 209

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = +1

Query: 4   DGKQPPFLKADWDKWVDEDEENEVPSNKFDNF 99
           D K+  FLK D+DKWVDEDE+NE     F NF
Sbjct: 106 DSKKVHFLKTDFDKWVDEDEQNEAAEEDFSNF 137