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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956447
Clone id TST39A01NGRL0025_M06
Library
Length 649
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_M06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCACTGTCAGTCTCTCCTCTTCATTGACCATCATTGAGCAATACACAGTCGAATATCCA
TGTCAGCTGCGGCAGGTGCAGCATTTACTCGCCCTCTCTATGGCGCAGAGCATGTGAAAG
CCCTTCTTCAATCTGCAGTTTCTTGTACTTCCTCCTCTTACAACACTGCCAGCAGTTGTG
GCAAGAAGGGTGCATGGCTGCATCCTCGCCAACAATTTGCGGCTGCAAGGAAGAAATCTG
TCTTGGGCCAGCAAGATTGGACCGTCTCTTTTGCGGAATTTTGCAGATACTCACAGCCTA
ATTCAGAGCAGCACAATTGCCTGCCATTGATGCCACGTAGCCGTGTTCGAGAAGGCGGAG
CTGACAGTGAGAGTAAAGGCAGCAATCCTTCATTCGATTCTGGAAATAGTGTTTTGAAGA
AGGAACCTTCCTTGCTGTTGAGCTTAGTGCAAGAGATTCAACCTCTAGATGCAAGTCAAA
TCAGCAAAGAGGTTTCTGCAGATAGCACCGATGCCATGAAACGGACAATTTCAGGCATGC
TGGGTCTGCTGCCATCTGACCAGTTTCATGTGACCGTGGAAACATCCCGCGAGCCGCTTG
GAAAGCTTTTTGTGTCTTCCATGATGACAGGCTACACTCTAAGAAATGC
■■Homology search results ■■ -
sp_hit_id Q55GR7
Definition sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum
Align length 45
Score (bit) 32.0
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956447|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_M06, 5'
         (649 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyo...    32   2.9  
sp|Q07963|UBR2_YEAST E3 ubiquitin-protein ligase UBR2 OS=Sacchar...    32   3.7  
sp|Q6DFF9|MABP1_XENLA Mitogen-activated protein kinase-binding p...    31   6.4  
sp|Q75B79|ATG11_ASHGO Autophagy-related protein 11 OS=Ashbya gos...    30   8.3  
sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo sap...    30   8.4  
sp|O02466|ILPR_BRALA Insulin-like peptide receptor OS=Branchiost...    30   8.4  

>sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F
            OS=Dictyostelium discoideum GN=elmoF PE=4 SV=1
          Length = 1185

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 300  NSEQHNCLPLMPRSRVREGGADSESKGSNPSFDSGNSVLKKEPSL 434
            ++EQH   P  PR ++        S G N + +SG+S L K+P L
Sbjct: 1070 SNEQHPVSPSYPRRQINIINGGGGSAGRNSTLNSGSSSLSKKPVL 1114


>sp|Q07963|UBR2_YEAST E3 ubiquitin-protein ligase UBR2
            OS=Saccharomyces cerevisiae GN=UBR2 PE=1 SV=1
          Length = 1872

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 632  ACHHGRHKKLSKRLAGCFHGHMKLVRWQQTQHA*NCPF-HGIGAI 501
            AC HG H K       C  GHMK +R  Q Q   N P  +G G I
Sbjct: 1318 ACGHGSHTK-------CLSGHMKSIRGIQNQTTKNIPLSYGSGLI 1355


>sp|Q6DFF9|MABP1_XENLA Mitogen-activated protein kinase-binding
           protein 1 OS=Xenopus laevis GN=mapkbp1 PE=2 SV=1
          Length = 1580

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 267 SFAEFCRYSQPNSEQHNCLPLMPRSRVR 350
           S+ E  R +  +SE+ NCL  MPR RVR
Sbjct: 814 SYWEMARGTNTSSERSNCLSKMPRQRVR 841


>sp|Q75B79|ATG11_ASHGO Autophagy-related protein 11 OS=Ashbya
           gossypii GN=ATG11 PE=3 SV=1
          Length = 1072

 Score = 30.4 bits (67), Expect = 8.3
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
 Frame = +3

Query: 210 QQFAAARKKSVLGQQDWTVSFAEFCRYSQPNSEQHNCLPLMPRSRVREGGADSESKGSNP 389
           ++  +  ++ ++ ++ W+  F+ +    Q   ++     L   +   E G      G+  
Sbjct: 443 KEIQSVLQRELVFREKWSSDFSSYSEIFQWQDDKPQLAKLFSNASPLEVGRPCIDIGTIQ 502

Query: 390 SF----------DSGNSVLKKEPSLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGM 539
           ++          +   ++LKK     LS V   Q +  S ++  VS DSTD+M   I G 
Sbjct: 503 TYIEMLARCDVAEDSQTLLKKT----LSEVSRFQFIVKSPLAGSVSKDSTDSMNEVIEGY 558

Query: 540 LG-------LLPSDQFHVTVETSREPLGKLFVSSM 623
                    LL S QF     TS  P G L  +S+
Sbjct: 559 KNRINKLELLLHSTQFS---NTSSWPTGVLNSNSL 590


>sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo
           sapiens GN=KRTAP9-3 PE=1 SV=1
          Length = 159

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 65  SCGRCSIYSPSLWRRACESPSSICSFLYFLLLQHC-QQLWQEGCMAASSPTIC 220
           SCG+ S  +P   RR C  P+S+C  L   L Q C     Q  C  A   T C
Sbjct: 89  SCGQSSSCAPVYCRRTCYHPTSVC--LPGCLNQSCGSNCCQPCCRPACCETTC 139


>sp|O02466|ILPR_BRALA Insulin-like peptide receptor OS=Branchiostoma
           lanceolatum PE=2 SV=1
          Length = 1363

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +2

Query: 161 QHCQQLWQEGCMAASSPTICGCKEEICL----GPARLDRLFC 274
           +HCQ++  E C+      I GC  E C+    GP   D + C
Sbjct: 204 EHCQKVCPESCLGNCRDGISGCCHENCIGGCDGPTERDCVAC 245
tr_hit_id Q9SEL1
Definition tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) OS=Glycine max
Align length 123
Score (bit) 105.0
E-value 2.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956447|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_M06, 5'
         (649 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment) O...   105   2e-21
tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genom...   104   4e-21
tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2 OS=Ar...    97   8e-19
tr|O82329|O82329_ARATH Putative uncharacterized protein At2g1491...    97   8e-19
tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea m...    96   2e-18
tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protei...    95   3e-18
tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza...    95   3e-18
tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative, e...    93   2e-17
tr|Q2QN28|Q2QN28_ORYSJ Os12g0581700 protein OS=Oryza sativa subs...    92   2e-17
tr|A2ZM33|A2ZM33_ORYSI Putative uncharacterized protein OS=Oryza...    92   2e-17
tr|A7QK34|A7QK34_VITVI Chromosome chr16 scaffold_110, whole geno...    90   1e-16
tr|Q9LFQ8|Q9LFQ8_ARATH Seed maturation-like protein (At4g33110) ...    90   1e-16
tr|Q8LGA2|Q8LGA2_ARATH Seed maturation-like protein OS=Arabidops...    90   1e-16
tr|A9NWY6|A9NWY6_PICSI Putative uncharacterized protein OS=Picea...    86   2e-15
tr|A7PMK3|A7PMK3_VITVI Chromosome chr14 scaffold_21, whole genom...    85   4e-15
tr|B4VTM6|B4VTM6_9CYAN Putative uncharacterized protein OS=Micro...    73   1e-11
tr|A3ITT5|A3ITT5_9CHRO Putative uncharacterized protein OS=Cyano...    73   1e-11
tr|A5B2M0|A5B2M0_VITVI Putative uncharacterized protein OS=Vitis...    73   2e-11
tr|Q10XF5|Q10XF5_TRIEI Putative uncharacterized protein OS=Trich...    72   4e-11
tr|B2J978|B2J978_NOSP7 Putative uncharacterized protein OS=Nosto...    71   5e-11
tr|B1X0Q4|B1X0Q4_CYAA5 Putative uncharacterized protein OS=Cyano...    71   5e-11
tr|B7JX53|B7JX53_SYNP8 Putative uncharacterized protein OS=Synec...    70   1e-10
tr|B4BWT7|B4BWT7_9CHRO Putative uncharacterized protein OS=Cyano...    70   1e-10
tr|Q4C086|Q4C086_CROWT Putative uncharacterized protein OS=Croco...    69   2e-10
tr|A0ZFS5|A0ZFS5_NODSP Putative uncharacterized protein OS=Nodul...    69   3e-10
tr|P74262|P74262_SYNY3 Slr1674 protein OS=Synechocystis sp. (str...    68   5e-10
tr|B0JGP0|B0JGP0_MICAN Putative uncharacterized protein OS=Micro...    68   5e-10
tr|A8YLD3|A8YLD3_MICAE Similar to tr|Q9KHE7|Q9KHE7 OS=Microcysti...    68   5e-10

>tr|Q9SEL1|Q9SEL1_SOYBN Seed maturation protein PM23 (Fragment)
           OS=Glycine max GN=PM23 PE=2 SV=1
          Length = 404

 Score =  105 bits (263), Expect = 2e-21
 Identities = 61/123 (49%), Positives = 73/123 (59%)
 Frame = +3

Query: 279 FCRYSQPNSEQHNCLPLMPRSRVREGGADSESKGSNPSFDSGNSVLKKEPSLLLSLVQEI 458
           F RY  PN         +  SR +          S+  F S +     + S+L  L+QEI
Sbjct: 43  FHRYPNPNPSLFRPSLSLSFSRTKPRSPFLVLAASSHDFASNS-----KKSVLTELIQEI 97

Query: 459 QPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYT 638
           +PLD S I K+V   + DAMKRTISGMLGLLPSDQFHV +E   EPL KL +SSMMTGYT
Sbjct: 98  EPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYT 157

Query: 639 LRN 647
           LRN
Sbjct: 158 LRN 160


>tr|A7QW70|A7QW70_VITVI Chromosome chr3 scaffold_199, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00007721001
           PE=4 SV=1
          Length = 388

 Score =  104 bits (260), Expect = 4e-21
 Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 6/97 (6%)
 Frame = +3

Query: 375 KGSNPSFD------SGNSVLKKEPSLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISG 536
           + S+ SFD      S NS  KK  S+L +L+QEI+PLD S I K+V   + DAMKRTISG
Sbjct: 48  RASSSSFDDLSSERSANSRSKK--SVLSNLIQEIEPLDVSLIQKDVLPTTVDAMKRTISG 105

Query: 537 MLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 647
           MLGLLPSDQFHV +E    PL KL VSSMMTGYTLRN
Sbjct: 106 MLGLLPSDQFHVVIEALWLPLSKLLVSSMMTGYTLRN 142


>tr|Q3EC02|Q3EC02_ARATH Uncharacterized protein At2g14910.2
           OS=Arabidopsis thaliana GN=At2g14910 PE=4 SV=1
          Length = 366

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 49/72 (68%), Positives = 57/72 (79%)
 Frame = +3

Query: 432 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 611
           +L  L+QEI+PLD S I K+V   + DAMKRTISGMLGLLPSD+F V +E+  EPL KL 
Sbjct: 80  VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139

Query: 612 VSSMMTGYTLRN 647
           VSSMMTGYTLRN
Sbjct: 140 VSSMMTGYTLRN 151


>tr|O82329|O82329_ARATH Putative uncharacterized protein At2g14910
           OS=Arabidopsis thaliana GN=At2g14910 PE=2 SV=1
          Length = 386

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 49/72 (68%), Positives = 57/72 (79%)
 Frame = +3

Query: 432 LLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLF 611
           +L  L+QEI+PLD S I K+V   + DAMKRTISGMLGLLPSD+F V +E+  EPL KL 
Sbjct: 80  VLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLL 139

Query: 612 VSSMMTGYTLRN 647
           VSSMMTGYTLRN
Sbjct: 140 VSSMMTGYTLRN 151


>tr|B4FRH2|B4FRH2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 392

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 48/73 (65%), Positives = 58/73 (79%)
 Frame = +3

Query: 429 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 608
           S+L +L+Q+I+PLD S I K+V+ ++ DAMKRTISGMLGLLPSDQF V VE    P  KL
Sbjct: 71  SMLWNLIQDIEPLDLSVIQKDVAPETVDAMKRTISGMLGLLPSDQFRVIVEALWNPFFKL 130

Query: 609 FVSSMMTGYTLRN 647
            VSS+MTGYTLRN
Sbjct: 131 LVSSIMTGYTLRN 143


>tr|Q75I52|Q75I52_ORYSJ Expressed protein (Seed maturation protein
           PM23, putative, expressed) OS=Oryza sativa subsp.
           japonica GN=Os03g41080 PE=4 SV=1
          Length = 405

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 48/73 (65%), Positives = 57/73 (78%)
 Frame = +3

Query: 429 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 608
           S+L +L+Q+I+PLD S I K+V  ++ DAMKRTISGMLGLLPSDQF V VE    P  KL
Sbjct: 83  SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142

Query: 609 FVSSMMTGYTLRN 647
            VSS+MTGYTLRN
Sbjct: 143 LVSSIMTGYTLRN 155


>tr|B8AM69|B8AM69_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12571 PE=4 SV=1
          Length = 425

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 48/73 (65%), Positives = 57/73 (78%)
 Frame = +3

Query: 429 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 608
           S+L +L+Q+I+PLD S I K+V  ++ DAMKRTISGMLGLLPSDQF V VE    P  KL
Sbjct: 137 SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 196

Query: 609 FVSSMMTGYTLRN 647
            VSS+MTGYTLRN
Sbjct: 197 LVSSIMTGYTLRN 209


>tr|A3AKA6|A3AKA6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_011228 PE=4 SV=1
          Length = 405

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 48/73 (65%), Positives = 57/73 (78%)
 Frame = +3

Query: 429 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 608
           S+L +L+Q+I+PLD S I K+V  ++ DAMKRTISGMLGLLPSDQF V VE    P  KL
Sbjct: 83  SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 142

Query: 609 FVSSMMTGYTLRN 647
            VSS+MTGYTLRN
Sbjct: 143 LVSSIMTGYTLRN 155


>tr|A2XJE4|A2XJE4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12569 PE=4 SV=1
          Length = 419

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 48/73 (65%), Positives = 57/73 (78%)
 Frame = +3

Query: 429 SLLLSLVQEIQPLDASQISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKL 608
           S+L +L+Q+I+PLD S I K+V  ++ DAMKRTISGMLGLLPSDQF V VE    P  KL
Sbjct: 97  SILWNLIQDIEPLDLSVIQKDVPPETVDAMKRTISGMLGLLPSDQFRVVVEALWNPFFKL 156

Query: 609 FVSSMMTGYTLRN 647
            VSS+MTGYTLRN
Sbjct: 157 LVSSIMTGYTLRN 169


>tr|Q2QN27|Q2QN27_ORYSJ Seed maturation protein PM23, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g39200 PE=4 SV=2
          Length = 420

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
 Frame = +3

Query: 327 LMPRSRVREGGADSE------SKGSNPSF---DSGNSVLKKEPSLLLSLVQEIQPLDASQ 479
           L  R R   GGA  E       +G N  F      N  ++ + S L +L+++I+PLD S 
Sbjct: 67  LHARGRPLRGGAYEEVSERAQPRGLNSMFLLHVIRNRRIEAKRSALWNLIKDIEPLDLSI 126

Query: 480 ISKEVSADSTDAMKRTISGMLGLLPSDQFHVTVETSREPLGKLFVSSMMTGYTLRN 647
           I K+V +++ DAMKRT+SGMLGLLPSDQFHV +E+   P  KL  SS+MTGYTL N
Sbjct: 127 IQKDVPSETVDAMKRTVSGMLGLLPSDQFHVVIESLWNPFFKLLASSIMTGYTLFN 182