DK956453 |
Clone id |
TST39A01NGRL0025_M12 |
Library |
TST39 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_M12. 5' end sequence. |
Accession |
DK956453 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL291Contig1 |
Sequence |
TGCTCGATTCATCCAGGGATACATGGGTGGAGGAGCAATGATTCGTGGCATGGCACGATT GATGGGGGTCGCAGCAGCAGGACACTGCCGCCATGTTTCCATCATCATCTCCAGCTTTCT GCCATGCTTCGACGCAAGAACATTCAGCCAACATGCCATCTGCGCTACATCTGTCTCAGA AGGAGGCTTCTTCTGGAGGTGTCCCTTCTGACATGCGATTCCTCAATGCAGATGACTTGG AATATTCTTCAGATGAGGATTGGGGCAAACTCTCTTACAATCGCCTTGTATTTTCCACTG CTCCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAAGAGCTACATGCTGCTCTTCATCTCT CCATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGCCCAACCATGCCTGTGGTGGAGAATG AGGAGAAAGAATTTGTTCCGGCCATTGTGAATCAAGAGAGGGCAACAGAGGAACAGCTTC CATCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCAGGAAGCAGCTCTGTTTATCAAGCAT TTCATTTATTGCAGACTAACTCCAAGGTCCAGGATGCAGTCAAATCGCTTGCTCGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.29 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL01 |
Definition |
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
48.1 |
E-value |
0.0004 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956453|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_M12, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 48 4e-04 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 43 0.012 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 43 0.016 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.10 tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=... 38 0.39 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.50 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 37 0.86 tr|Q4P1M0|Q4P1M0_USTMA Putative uncharacterized protein OS=Ustil... 37 1.1 tr|A8NSH9|A8NSH9_COPC7 Putative uncharacterized protein OS=Copri... 37 1.1 tr|Q5UE95|Q5UE95_RABIT Potassium channel, subfamily K, member 5 ... 36 1.5 tr|B6FZE6|B6FZE6_9CLOT Putative uncharacterized protein OS=Clost... 35 2.5 tr|Q9LRH2|Q9LRH2_RAPSA Vacuolar calcium binding protein OS=Rapha... 35 2.5 tr|Q47E23|Q47E23_DECAR Rhs element Vgr protein OS=Dechloromonas ... 35 3.3 tr|Q0SK55|Q0SK55_RHOSR Putative uncharacterized protein OS=Rhodo... 35 3.3 tr|B3LZC3|B3LZC3_DROAN GF16200 OS=Drosophila ananassae GN=GF1620... 35 3.3 tr|B4DXS8|B4DXS8_HUMAN cDNA FLJ50911, moderately similar to Homo... 35 3.3 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 35 4.3 tr|B4QLI9|B4QLI9_DROSI GD13015 OS=Drosophila simulans GN=GD13015... 35 4.3 tr|B4PSR3|B4PSR3_DROYA GE24245 OS=Drosophila yakuba GN=GE24245 P... 35 4.3 tr|B8PJ31|B8PJ31_9APHY Predicted protein OS=Postia placenta Mad-... 35 4.3 tr|Q1Z792|Q1Z792_PHOPR Putative chemotaxis protein CheA OS=Photo... 34 5.6 tr|Q584C3|Q584C3_9TRYP Putative uncharacterized protein OS=Trypa... 34 5.6 tr|Q9BLB3|Q9BLB3_CAEEL Putative uncharacterized protein OS=Caeno... 34 5.6 tr|Q16G26|Q16G26_AEDAE Unkempt protein OS=Aedes aegypti GN=AAEL0... 34 5.6 tr|B4AEW4|B4AEW4_BACPU Glutamate-5-semialdehyde dehydrogenase OS... 34 7.3 tr|Q69MX4|Q69MX4_ORYSJ Os09g0407800 protein OS=Oryza sativa subs... 34 7.3 tr|A3BYP5|A3BYP5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 7.3 tr|A2Z147|A2Z147_ORYSI Putative uncharacterized protein OS=Oryza... 34 7.3 tr|B0WC66|B0WC66_CULQU Putative uncharacterized protein OS=Culex... 34 7.3 tr|Q6C4T1|Q6C4T1_YARLI YALI0E23969p OS=Yarrowia lipolytica GN=YA... 34 7.3
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 48.1 bits (113), Expect = 4e-04 Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 26/190 (13%) Frame = +3
Query: 102 SSSPAFCHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDW 263 +++ A C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 17 ATNAAMCRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY 76
Query: 264 GKLSYNRLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESP 398 LVF T P++ EVEEAT +L AL + + SS EK+ Sbjct: 77 -------LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGA 129
Query: 399 TM--PVVENEEKEF--VPAIVNQERATEEQL-PXXXXXXXXXXXXXXXVYQAFHLLQTNS 563 P V+ E+ + V A+ + L + +AFH Q N Sbjct: 130 VSRDPKVDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNP 189
Query: 564 KVQDAVKSLA 593 ++Q V SLA Sbjct: 190 QIQQMVVSLA 199
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 43.1 bits (100), Expect = 0.012 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Frame = +3
Query: 231 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 392 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 393 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 563 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 564 KVQDAVKSLA 593 VQ+ V SLA Sbjct: 193 AVQEMVISLA 202
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 42.7 bits (99), Expect = 0.016 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 3/159 (1%) Frame = +3
Query: 126 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 305 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 306 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 476 S EE +EAT++L A++L S P SS+ + S V F ++ RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQS---SENRAVESA 150
Query: 477 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLA 593 +P QAF L N+ Q V S+A Sbjct: 151 VP-------------QVALQAFAFLSENTAAQTVVASIA 176
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 40.0 bits (92), Expect = 0.10 Identities = 53/182 (29%), Positives = 72/182 (39%), Gaps = 16/182 (8%) Frame = +3
Query: 96 FPSSSPAFCHASTQEHSANMPSALHLSQKEASSGGVP------------SDMRFLNADDL 239 F ++PAF A S P AS G VP D F + D+ Sbjct: 29 FRHAAPAFATAPAATGSDAAPLV------SASGGEVPPAAAQWAASWELDDWEFADCGDV 82
Query: 240 E----YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMP 407 + E + RLVF+ PS EE EEAT EL A+ + S VE Sbjct: 83 TPAAVVAEREATAAAAKPRLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE------- 134
Query: 408 VVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKS 587 VV+ + KEF + AT+ +P V QAF LL+++++ Q V S Sbjct: 135 VVKEQNKEF------NKLATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVAS 178
Query: 588 LA 593 LA Sbjct: 179 LA 180
>tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=DEHA2C16500g PE=4 SV=2 Length = 309
Score = 38.1 bits (87), Expect = 0.39 Identities = 31/115 (26%), Positives = 51/115 (44%) Frame = +3
Query: 102 SSSPAFCHASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYN 281 S + + C + HS PS L QK+ SS +++ Y++ +D + Y Sbjct: 162 SENDSSCQVTPISHSLLSPSLLSQVQKQKSS------------ENISYTNLQDLSSIDY- 208
Query: 282 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAI 446 P+E+E E K L +LS P S K +PT P + NE ++ + +I Sbjct: 209 -----YPPTEQEWETEHKRLW--FNLSKPLKKSFRKPTPTTP-INNENQKLIDSI 255
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 37.7 bits (86), Expect = 0.50 Identities = 51/224 (22%), Positives = 84/224 (37%), Gaps = 47/224 (20%) Frame = +3
Query: 63 WGSQQQDTAAMFPS----SSPAFCHASTQEHSANMPSALHLSQKEASSGGVPSD--MRFL 224 W S + A P+ ++ A+CH + +++ P + S K + GG+ + + + Sbjct: 7 WRSVARAVGAAAPTVAVTTNAAYCHCAPPPNAS--PRSRGASCKCKAVGGIHAHPGLSAV 64
Query: 225 NADDLEYSSDEDW---GKLSYNRLVFSTAPSEEEVEEATKELHAALHLSI-----PASSS 380 + ++ EDW G + VF + P+ EEVEEA+ +L AL L P S + Sbjct: 65 SYGPRQFWDGEDWEIAGDEERDHYVFGSLPTVEEVEEASSDLQNALRLGFFTPPPPKSEA 124
Query: 381 VEK-------------------------ESPTMPVVENEEKEF--------VPAIVNQER 461 + K E T+ V E+E V +V + Sbjct: 125 LPKPESSSSRSHPQSPRSSLGPVLVEATEMSTVTTVGEVEEEVTSNLSPLPVEPLVESKE 184
Query: 462 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLA 593 E L + +AF+ Q N +VQ V SLA Sbjct: 185 CIESPLYEVATSPKHSGAPSSAMLEAFYQFQHNPQVQGMVVSLA 228
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 37.0 bits (84), Expect = 0.86 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 11/128 (8%) Frame = +3
Query: 240 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 413 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 414 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 566 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 567 VQDAVKSL 590 V++ V SL Sbjct: 206 VREMVISL 213
>tr|Q4P1M0|Q4P1M0_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM05993.1 PE=3 SV=1 Length = 525
Score = 36.6 bits (83), Expect = 1.1 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 3/101 (2%) Frame = +3
Query: 99 PSSSPAFCHASTQEHSANMPSALHLSQKEASSG--GVPS-DMRFLNADDLEYSSDEDWGK 269 P S H + + AN S +H S + +G GV F+ DDL + + +W + Sbjct: 366 PLLSSRLSHIISSNNLAN--SFMHFSTSYSDTGLWGVYMVSENFVQLDDLIHFTLREWQR 423
Query: 270 LSYNRLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKE 392 +S TAP+E EVE A +L A+L L + ++++ ++ Sbjct: 424 MS-------TAPTEGEVERAKAQLKASLLLGLDGTTAIAED 457
>tr|A8NSH9|A8NSH9_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05009 PE=3 SV=1 Length = 519
Score = 36.6 bits (83), Expect = 1.1 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = +3
Query: 99 PSSSPAFCHASTQEHSANMPSALHLSQKEASSGGVPS-DMRFLNADDLEYSSDEDWGKLS 275 P +S H + + AN + S + G+ +N DDL + + ++W ++S Sbjct: 311 PLTSSRLSHIVSSNNLANSFMSFSTSYSDTGLWGIYLVTENLMNIDDLVHFTLKEWTRMS 370
Query: 276 YNRLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKE 392 AP+ EVE A +L AAL LS+ +++V ++ Sbjct: 371 I-------APTPTEVERAKSQLKAALLLSLDGTTAVAED 402
>tr|Q5UE95|Q5UE95_RABIT Potassium channel, subfamily K, member 5 OS=Oryctolagus cuniculus GN=KCNK5 PE=2 SV=1 Length = 498
Score = 36.2 bits (82), Expect = 1.5 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 23/146 (15%) Frame = +3
Query: 66 GSQQQDTAAMFPSSSPAFCHA-----STQEHSANMPSALHLSQK--------EASSGGVP 206 G Q A+ PS +P ++ S +E S + S H+S+ +A G P Sbjct: 326 GPQAGGLPALPPSLAPLVVYSKNRVPSLEEVSQTLRSKGHVSRPPGGEQDGAQAPEDGSP 385
Query: 207 SDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP----------SEEEVEEATKELHAALH 356 S F+N D E W Y+ L+F A S+EE +++ E + A+ Sbjct: 386 SSEVFINQLDRISEEGEPWDAQDYHPLIFQNANINFVHEDAGLSDEETSKSSLEDNLAVE 445
Query: 357 LSIPASSSVEKESPTMPVVENEEKEF 434 P + E T V ++E F Sbjct: 446 ERPPEGARAEAPLTTAEVPSSDESTF 471
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