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NBDC - LSDB Archive
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DK956489
Clone id TST39A01NGRL0025_O01
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_O01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCCACTTCTCTCGTCAACGAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTC
TCTAGACGAGGGCTTGTAGCTTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGT
TGGCTCCGTCCAGAATTTCACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGC
TCCTGCTTCTGCCTTCTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATCTAG
CAATATTGCCAAGCATTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAA
GGACAGATGGGCTGGTCTTGCATATGACACCTCCGATGACCAGCAAGACATCACTCGTGG
AAAAGGCATGGTGGACGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGT
CATGAGTTCGTATGACTATATTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAA
GGATGGCTATTACATCGCCCCTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAA
CTTCATGAACTTACCAAATATCAAGGTGCCTTTGATTCTTGGTATTTGGGGTGGCAAGGG
GCAAGGCAAGTCCTTCCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAA
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 167
Score (bit) 224.0
E-value 3.0e-58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956489|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_O01, 5'
         (647 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   224   3e-58
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   224   3e-58
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   219   7e-57
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   216   6e-56
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   216   8e-56
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   216   1e-55
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   214   3e-55
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   213   7e-55
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   213   9e-55
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   209   1e-53
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   208   2e-53
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   207   4e-53
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   206   1e-52
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   206   1e-52
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   192   2e-48
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   152   1e-36
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...    88   4e-17
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...    87   7e-17
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    74   7e-13
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.34 
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    33   1.7  
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    32   2.2  
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    32   3.7  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    32   3.7  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   3.7  
sp|P37539|YAAR_BACSU Uncharacterized protein yaaR OS=Bacillus su...    31   4.9  
sp|Q9CBU4|Y1582_MYCLE Putative zinc metalloprotease ML1582 OS=My...    31   6.4  
sp|O14656|TOR1A_HUMAN Torsin-1A OS=Homo sapiens GN=TOR1A PE=1 SV=1     31   6.4  
sp|P27643|SP5K_BACSU Stage V sporulation protein K OS=Bacillus s...    31   6.4  
sp|Q8CNW8|DHA_STAES Alanine dehydrogenase OS=Staphylococcus epid...    31   6.4  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  224 bits (571), Expect = 3e-58
 Identities = 109/167 (65%), Positives = 131/167 (78%)
 Frame = +2

Query: 146 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 325
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 326 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 505
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 506 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMG 183


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  224 bits (571), Expect = 3e-58
 Identities = 109/167 (65%), Positives = 131/167 (78%)
 Frame = +2

Query: 146 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 325
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 326 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 505
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 506 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMG 183


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  219 bits (559), Expect = 7e-57
 Identities = 112/176 (63%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
 Frame = +2

Query: 119 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQT 295
           +GSV N  P N       ++ P+S F G+SLKK      +S ++   + + AS DE KQT
Sbjct: 8   IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQT 66

Query: 296 KKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDN 475
            KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS G R ++ DN
Sbjct: 67  DKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDN 126

Query: 476 MKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 643
             DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 127 NMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKM 182


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  216 bits (551), Expect = 6e-56
 Identities = 102/155 (65%), Positives = 123/155 (79%)
 Frame = +2

Query: 182 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 361
           P SAF G+ LK ++    S  +  +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26  PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85

Query: 362 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 541
           KG+ D LFQ  +G GT +AV+SSY+YIS G R +S DN  DG+YIAPAFMDKL VHI KN
Sbjct: 86  KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145

Query: 542 FMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           F+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+G
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMG 180


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  216 bits (550), Expect = 8e-56
 Identities = 110/163 (67%), Positives = 129/163 (79%), Gaps = 5/163 (3%)
 Frame = +2

Query: 173 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 337
           ++AP SAFFG SLKK   S V ++   +  F + A+E   +E +QT KDRW GLAYD SD
Sbjct: 25  ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84

Query: 338 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 517
           DQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S G R   +DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142

Query: 518 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           LVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMG 185


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  216 bits (549), Expect = 1e-55
 Identities = 111/164 (67%), Positives = 123/164 (75%), Gaps = 8/164 (4%)
 Frame = +2

Query: 179 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 334
           APAS    F G  LKK   S V     SSNI +  V+    DEGKQT +DRW GLAYD S
Sbjct: 11  APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 335 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 514
           DDQQDITRGKG VD+LFQ   G GT  AV+SSY+Y+SQG R +  DN   G+YIAPAFMD
Sbjct: 71  DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 515 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMG 174


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  214 bits (545), Expect = 3e-55
 Identities = 111/184 (60%), Positives = 130/184 (70%), Gaps = 10/184 (5%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS----NIAKHFVVHASE 277
           SV     VN TP+ + ++      P++AFFG +LKK     VSS    N +   V    +
Sbjct: 4   SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQID 63

Query: 278 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 454
            D  KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  VDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 455 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 634
           R +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 124 RQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVF 183

Query: 635 SKLG 646
            K+G
Sbjct: 184 RKMG 187


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  213 bits (542), Expect = 7e-55
 Identities = 102/157 (64%), Positives = 121/157 (77%)
 Frame = +2

Query: 176 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 355
           +APAS F G  +   +    S+  +       +  E KQT  DRW GLAYDTSDDQQDIT
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86

Query: 356 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 535
           RGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI 
Sbjct: 87  RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146

Query: 536 KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +K+G
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMG 183


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  213 bits (541), Expect = 9e-55
 Identities = 104/163 (63%), Positives = 131/163 (80%), Gaps = 5/163 (3%)
 Frame = +2

Query: 173 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 337
           ++ P+SAFFG SLKK   S V ++   +  F + A++   +E +QT+ DRW GLAYD SD
Sbjct: 25  ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84

Query: 338 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 517
           DQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144

Query: 518 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           LVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCELVF+K+G
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMG 187


>sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3
          Length = 433

 Score =  209 bits (531), Expect = 1e-53
 Identities = 110/178 (61%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
 Frame = +2

Query: 137 FTPVNGTPVRVRSTAPASAFFGASLKKTAPSVV-------SSNIAKHFVVHASE-DEGKQ 292
           F+   G P    ST   S+F G  L K   S         SS+ ++   + A E DE KQ
Sbjct: 5   FSSTVGAPA---STPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQ 61

Query: 293 TKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMD 472
           T +DRW GLAYD SDDQQDITRGKG+VD LFQ  +G GT  AV+SSYDYISQGQ+ ++ D
Sbjct: 62  TDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFD 121

Query: 473 NMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           NM DG+YIA  FMDKLVVH++KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 122 NMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMG 179
tr_hit_id A9TJI2
Definition tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 161
Score (bit) 230.0
E-value 6.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956489|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_O01, 5'
         (647 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   230   6e-59
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   229   8e-59
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   229   8e-59
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   225   2e-57
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   225   2e-57
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   224   3e-57
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   224   3e-57
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   224   3e-57
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   224   3e-57
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   223   6e-57
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   223   1e-56
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   223   1e-56
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   221   2e-56
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   221   2e-56
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   220   7e-56
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   219   1e-55
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   218   2e-55
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   218   2e-55
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   218   3e-55
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   216   9e-55
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   216   9e-55
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   216   1e-54
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   216   1e-54
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   214   3e-54
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   214   4e-54
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   213   6e-54
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   213   8e-54
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   213   8e-54
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   213   8e-54
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   211   3e-53

>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  230 bits (586), Expect = 6e-59
 Identities = 116/161 (72%), Positives = 130/161 (80%)
 Frame = +2

Query: 164 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 343
           RV+ST P+SAFFG   K +A   +     K  VV  +E E  +TK DRWAGL  D SDDQ
Sbjct: 17  RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 344 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 523
           QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75  QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 524 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           +HIAKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLG
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLG 175


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  229 bits (585), Expect = 8e-59
 Identities = 117/180 (65%), Positives = 136/180 (75%), Gaps = 6/180 (3%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 286
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 287 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 466
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 467 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  229 bits (585), Expect = 8e-59
 Identities = 117/180 (65%), Positives = 136/180 (75%), Gaps = 6/180 (3%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 286
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 287 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 466
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 467 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  225 bits (574), Expect = 2e-57
 Identities = 115/181 (63%), Positives = 135/181 (74%), Gaps = 7/181 (3%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 283
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 284 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 463
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 464 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 643
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 644 G 646
           G
Sbjct: 183 G 183


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  225 bits (574), Expect = 2e-57
 Identities = 115/181 (63%), Positives = 135/181 (74%), Gaps = 7/181 (3%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 283
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 284 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 463
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 464 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 643
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 644 G 646
           G
Sbjct: 183 G 183


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  224 bits (572), Expect = 3e-57
 Identities = 110/175 (62%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 301
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 302 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 481
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 482 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLG
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLG 186


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  224 bits (572), Expect = 3e-57
 Identities = 110/175 (62%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 301
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 302 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 481
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 482 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLG
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLG 186


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score =  224 bits (572), Expect = 3e-57
 Identities = 110/175 (62%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
 Frame = +2

Query: 125 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 301
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 302 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 481
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 482 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLG
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLG 186


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 461

 Score =  224 bits (571), Expect = 3e-57
 Identities = 114/161 (70%), Positives = 131/161 (81%), Gaps = 3/161 (1%)
 Frame = +2

Query: 173 STAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQ 343
           ST P SAFFG SLKK + S   +S I+   F V A E DE KQT+KDRW GL  D SDDQ
Sbjct: 25  STVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQ 84

Query: 344 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 523
           QDITRGKGMVD+LFQ   G GT + V+SSY+Y+SQG R +++DNM DGYYIAPAFMDK+V
Sbjct: 85  QDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKIV 144

Query: 524 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           VHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 145 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMG 185


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  223 bits (569), Expect = 6e-57
 Identities = 111/172 (64%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
 Frame = +2

Query: 134 NFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRW 310
           N  P+N       ++ P+SAF G SLKK +  +     +  +F V A  DE KQT KD+W
Sbjct: 12  NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKW 71

Query: 311 AGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGY 490
            GLA+D SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSYDYIS G R +++DN  DG+
Sbjct: 72  KGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGF 131

Query: 491 YIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 646
           YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+G
Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMG 183