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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956492
Clone id TST39A01NGRL0025_O04
Library
Length 640
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_O04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGAAAGCATGGCCTCCACGTGACTTGCCTCCCCCCTTCTCACTGTCCTCTGCATCTCCCG
GTATCTTCTTAAGATTCTCACTAATTAAGCAATTAGGGACCCTCTTCTTAAGATTCTCAC
TAACCAAGCAATTCCTACTAGATAAAAAGTTGCTAGCCTGAAGTGTTGAACTCTCTTTCT
CAATACAAACAGCCATGAGTGGTCATTGAGTCGGAATGAAATGGAGAGGGCCTTGAGGAC
ATCAGCTCTCGCAGCAAGCCAAGCAGCTCACAAGAACCTGGTAGCTCTACTGCCTCACAC
CAAGCTTTTCACATGCAGAGGCCCTCTTCCTCCCAGGTTTCTCGTACAAGCTGCTGCCTT
CACAAGCAGCAGCAAGTCATCGCCTTTTACTTCTCTGACACTTGCAGAGCGTGCAAAAAA
ATCACTGGGAAGAACACTCTCTTCTGTCGCCCCTCCATTTCAGAGGGATGGAAAGTTCCA
ACCGAACAAAGCTACACTGGCTGCCATTGGTGCAGCAGTTCTCGGCATGGCCATATTCGC
AGTACTTTTTAAGCCTACAGATAGATCAGGTGGTTCAGTGGAAGACCTTGTGAAAAGGGG
CCAGTTGAGATCAGACAGAAGATCCAGCTCTAGGCCATTG
■■Homology search results ■■ -
sp_hit_id Q9PWI4
Definition sp|Q9PWI4|PLIGA_ELAQU Phospholipase A2 inhibitor subunit gamma A OS=Elaphe quadrivirgata
Align length 50
Score (bit) 32.7
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956492|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_O04, 5'
         (640 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9PWI4|PLIGA_ELAQU Phospholipase A2 inhibitor subunit gamma A...    33   1.6  
sp|Q27536|GALT_CAEEL Probable galactose-1-phosphate uridylyltran...    31   6.2  
sp|Q6V3V8|THR_DROVI Protein three rows OS=Drosophila virilis GN=...    30   8.1  

>sp|Q9PWI4|PLIGA_ELAQU Phospholipase A2 inhibitor subunit gamma A
           OS=Elaphe quadrivirgata PE=1 SV=1
          Length = 202

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -1

Query: 541 CEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQ 395
           C Y + E C +   QC  V LE+ S PL  R   R C    F  +LCK +
Sbjct: 32  CGYDYVEECHSPEDQCGKVLLEISSAPLSIRSSHRNC----FSSSLCKLE 77


>sp|Q27536|GALT_CAEEL Probable galactose-1-phosphate
           uridylyltransferase OS=Caenorhabditis elegans
           GN=ZK1058.3 PE=2 SV=1
          Length = 352

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +3

Query: 414 QKNHWEEHSLLSPLHFRGMESSNRTKL-----HWLPLVQQFSAWPYSQYFL 551
           QK H+E+H  +  + +   E+  + ++     HW  LV  ++ WPY    L
Sbjct: 187 QKKHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFWPYETMLL 237


>sp|Q6V3V8|THR_DROVI Protein three rows OS=Drosophila virilis GN=thr
            PE=3 SV=1
          Length = 1411

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = -2

Query: 201  HSWLFVLRKRVQHFRLATFYLVGIAWLVRILRRGSLIA*LVRILRRYREMQRTVRRGEAS 22
            H+ L+ L +  +H +L  FY +  AWL +   RG+ +  ++ +L  Y+      RR +  
Sbjct: 1124 HARLYFLNR--EHEQLDDFYALANAWLQQNAARGNALGHMLLVLHIYQANYLRARRRQQQ 1181

Query: 21   HVE 13
             +E
Sbjct: 1182 AIE 1184
tr_hit_id A9SIZ7
Definition tr|A9SIZ7|A9SIZ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 59
Score (bit) 38.9
E-value 0.27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956492|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_O04, 5'
         (640 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SIZ7|A9SIZ7_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.27 
tr|A9TY85|A9TY85_PHYPA Predicted protein OS=Physcomitrella paten...    37   1.0  
tr|Q9PTC2|Q9PTC2_NOTAT Phospholipase A2 inhibitor alpha subunit ...    36   1.7  
tr|Q9PTC1|Q9PTC1_9SAUR Phospholipase A2 inhibitor alpha subunit ...    36   2.3  
tr|Q9PU33|Q9PU33_9SAUR Phospholipase A2 inhibitor alpha chain ii...    35   3.9  
tr|Q9PTB9|Q9PTB9_OXYMI Phospholipase A2 inhibitor alpha subunit ...    34   6.6  
tr|Q9PRI2|Q9PRI2_OXYMI Phospholipase A2 inhibitor alpha subunit ...    34   6.6  
tr|Q78CF8|Q78CF8_9SAUR Phospholipase A2 inhibitor alpha subunit ...    34   6.6  
tr|Q9PTC4|Q9PTC4_NOTAT Phospholipase A2 inhibitor alpha subunit ...    34   8.7  

>tr|A9SIZ7|A9SIZ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_80071 PE=4 SV=1
          Length = 386

 Score = 38.9 bits (89), Expect = 0.27
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +2

Query: 437 LSSVAPPFQRDGKFQP-NKATLAAIGAAVLGMAIFAVLFKP-TDRSGGSVEDLVKRGQL 607
           +SS+     + G+  P N A    + AAV+ MAI   + KP  +  GGSV DL+KRGQL
Sbjct: 124 VSSLVDEAPQIGRGVPMNLAARVGVTAAVVMMAILGFVAKPRNENGGGSVSDLIKRGQL 182


>tr|A9TY85|A9TY85_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172631 PE=4 SV=1
          Length = 392

 Score = 37.0 bits (84), Expect = 1.0
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 485 NKATLAAIGAAVLGMAIFAVLFKP-TDRSGGSVEDLVKRGQL 607
           N A    + AAV+ M +   + KP  D  GGSV DL+KRGQL
Sbjct: 147 NLAAGVGVTAAVIMMTVLGFVAKPRNDDGGGSVSDLIKRGQL 188


>tr|Q9PTC2|Q9PTC2_NOTAT Phospholipase A2 inhibitor alpha subunit
           isoform NAI-3A OS=Notechis ater PE=2 SV=1
          Length = 202

 Score = 36.2 bits (82), Expect = 1.7
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 547 KYCEYGHAENCCTNGSQCSFVRLELS-IPLKWRGDRRECSSQ*FFCTLCKCQR 392
           K CE G  E C +   QC  V +E+S  P+ +R   R C    F  +LCK +R
Sbjct: 30  KDCEGGETEECASPEDQCGTVLMEVSTAPISFRSIHRNC----FSSSLCKLER 78


>tr|Q9PTC1|Q9PTC1_9SAUR Phospholipase A2 inhibitor alpha subunit
           isoform OSI-1A OS=Oxyuranus scutellatus PE=2 SV=1
          Length = 202

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 562 ICR-LKKYCEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQ 395
           ICR   K CE   AE C +   QC  V LE+ S P+ +R   R C    F  +LCK +
Sbjct: 24  ICRNFGKDCESEEAEECASPEDQCGTVLLEISSAPISFRSIHRNC----FSSSLCKLE 77


>tr|Q9PU33|Q9PU33_9SAUR Phospholipase A2 inhibitor alpha chain iii
           OS=Notechis scutatus PE=2 SV=1
          Length = 202

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 562 ICR-LKKYCEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQR 392
           IC  L + CE   AE C +   QC  V +E+ S P+ +R   R C    F  +LCK +R
Sbjct: 24  ICHNLGRDCETEEAEECASPEDQCGTVLMEVSSAPISFRSIHRNC----FSSSLCKLER 78


>tr|Q9PTB9|Q9PTB9_OXYMI Phospholipase A2 inhibitor alpha subunit
           isoform OMI-2A OS=Oxyuranus microlepidotus PE=2 SV=1
          Length = 202

 Score = 34.3 bits (77), Expect = 6.6
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 547 KYCEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQ 395
           K CE   AE C +   QC  V LE+ S P+ +R   R C    F  +LCK +
Sbjct: 30  KDCESEEAEECASPEDQCGTVLLEISSAPISFRSIHRNC----FSSSLCKLE 77


>tr|Q9PRI2|Q9PRI2_OXYMI Phospholipase A2 inhibitor alpha subunit
           isoform OMI-1A OS=Oxyuranus microlepidotus PE=2 SV=1
          Length = 202

 Score = 34.3 bits (77), Expect = 6.6
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 547 KYCEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQ 395
           K CE   AE C +   QC  V LE+ S P+ +R   R C    F  +LCK +
Sbjct: 30  KVCESEEAEECASPEDQCGTVLLEISSAPISFRTIHRNC----FSSSLCKLE 77


>tr|Q78CF8|Q78CF8_9SAUR Phospholipase A2 inhibitor alpha subunit
           isoform OSI-2A OS=Oxyuranus scutellatus PE=2 SV=1
          Length = 202

 Score = 34.3 bits (77), Expect = 6.6
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 547 KYCEYGHAENCCTNGSQCSFVRLEL-SIPLKWRGDRRECSSQ*FFCTLCKCQ 395
           K CE   AE C +   QC  V LE+ S P+ +R   R C    F  +LCK +
Sbjct: 30  KVCESEEAEECASPEDQCGTVLLEISSAPISFRTIHRNC----FSSSLCKLE 77


>tr|Q9PTC4|Q9PTC4_NOTAT Phospholipase A2 inhibitor alpha subunit
           isoform NAI-1A OS=Notechis ater PE=2 SV=1
          Length = 202

 Score = 33.9 bits (76), Expect = 8.7
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 547 KYCEYGHAENCCTNGSQCSFVRLELS-IPLKWRGDRRECSSQ*FFCTLCKCQR 392
           K CE G  E C +   QC  V LE+S  P+  R   R C    F  +LCK +R
Sbjct: 30  KDCEGGVTEECASPEDQCGTVLLEVSTAPISTRTIHRNC----FSSSLCKLER 78