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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956513
Clone id TST39A01NGRL0025_P01
Library
Length 611
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_P01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGCACCTACTGCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTATGGTGTCC
GCCTGCTTCTCTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCACTAGGCCA
GAGGGGCGTTTAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGTTCGAG
CTTCGCATGCTCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATGGTGTG
GTTGGGCAAGCTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCTCCTCA
GACGAAGATGAGCGCGAAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGGACAAC
GGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGAGCTGC
AACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTGAGGTT
ATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCTCTGTA
GAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGGCTGATTTATGCTGGAAGGACAT
TGCGAGTGAAT
■■Homology search results ■■ -
sp_hit_id Q08937
Definition sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris
Align length 71
Score (bit) 83.6
E-value 7.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956513|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_P01, 5'
         (611 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    84   7e-16
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    84   7e-16
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    84   7e-16
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    83   1e-15
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    80   8e-15
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    80   8e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    78   3e-14
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    78   4e-14
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    76   1e-13
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    74   5e-13
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    74   8e-13
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    72   2e-12
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    62   3e-09
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    61   5e-09
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    60   7e-09
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    60   9e-09
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    60   9e-09
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    60   9e-09
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    60   9e-09
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    60   1e-08
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo...    60   1e-08
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    59   1e-08
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus...    59   1e-08
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ...    59   1e-08
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric...    59   1e-08
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    59   2e-08
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    59   3e-08
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    59   3e-08
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    58   3e-08
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    58   3e-08

>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 83.6 bits (205), Expect = 7e-16
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +1

Query: 364 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 543
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 544 DCNTAIEKLDG 576
           +   A ++ +G
Sbjct: 140 EVEAAEQQFNG 150



 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
 Frame = +1

Query: 352 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 507
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 508 RGFGFVTMSSVEDCNTAIEKLDG 576
           RGFGFVT SS ++ N AI+ L+G
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNG 270


>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 83.6 bits (205), Expect = 7e-16
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = +1

Query: 355 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 528
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 529 MSSVEDCNTAIEKLDG 576
           MS+VE+   A+E L+G
Sbjct: 103 MSTVEEAEKAVELLNG 118



 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = +1

Query: 376 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 555
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 556 AIEKLDG 576
           AI  LDG
Sbjct: 206 AIAALDG 212


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 83.6 bits (205), Expect = 7e-16
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
 Frame = +1

Query: 349 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 519
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 520 FVTMSSVEDCNTAIEKLDG 576
           FVTMSSV +   A ++ +G
Sbjct: 136 FVTMSSVSEVEAAAQQFNG 154



 Score = 67.0 bits (162), Expect = 7e-11
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +1

Query: 337 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 516
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 517 GFVTMSSVEDCNTAIEKLDG 576
           GFVT  S ++   AI+ LDG
Sbjct: 248 GFVTYDSSQEVQNAIKSLDG 267


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +1

Query: 364 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 543
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 544 DCNTAIEKLDG 576
           +   A ++ +G
Sbjct: 141 EVEAAEQQFNG 151



 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
 Frame = +1

Query: 352 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 507
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 508 RGFGFVTMSSVEDCNTAIEKLDG 576
           RGFGFVT SS ++ N AI+ L+G
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNG 271


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 80.1 bits (196), Expect = 8e-15
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +1

Query: 373 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 552
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 553 TAIEKLD 573
             IEKL+
Sbjct: 140 AVIEKLN 146



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 29/76 (38%), Positives = 42/76 (55%)
 Frame = +1

Query: 370 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 549
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 550 NTAIEKLDGG*FMLEG 597
             AI+ L+    +LEG
Sbjct: 239 EAAIQALNNS--VLEG 252


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 80.1 bits (196), Expect = 8e-15
 Identities = 37/63 (58%), Positives = 51/63 (80%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 568 LDG 576
            +G
Sbjct: 148 FNG 150



 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = +1

Query: 376 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 555
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 556 AIEKLDG 576
           AIE LDG
Sbjct: 245 AIESLDG 251


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 35/63 (55%), Positives = 52/63 (82%)
 Frame = +1

Query: 385 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 564
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 565 KLD 573
           K +
Sbjct: 210 KFN 212



 Score = 77.0 bits (188), Expect = 7e-14
 Identities = 36/74 (48%), Positives = 48/74 (64%)
 Frame = +1

Query: 355 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 534
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 535 SVEDCNTAIEKLDG 576
            V++ N AI  LDG
Sbjct: 294 DVDELNEAISALDG 307


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 36/60 (60%), Positives = 50/60 (83%)
 Frame = +1

Query: 385 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 564
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156



 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = +1

Query: 355 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 534
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 535 SVEDCNTAIEKLDG 576
           S  + + AI  LDG
Sbjct: 241 SEAEMSEAIANLDG 254


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 568 LDG 576
            +G
Sbjct: 148 FNG 150



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
 Frame = +1

Query: 346 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 501
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 502 RSRGFGFVTMSSVEDCNTAIEKLDG 576
           RSRGFGFVT SS E+ N AIE LDG
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDG 257


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 34/63 (53%), Positives = 49/63 (77%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 568 LDG 576
            +G
Sbjct: 160 FNG 162



 Score = 67.0 bits (162), Expect = 7e-11
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 568 LDG 576
           L+G
Sbjct: 318 LNG 320
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 63
Score (bit) 96.3
E-value 7.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956513|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_P01, 5'
         (611 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...    96   7e-19
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...    95   2e-18
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...    96   2e-18
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...    91   3e-17
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...    91   5e-17
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       91   7e-17
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    90   1e-16
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    90   1e-16
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       90   1e-16
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    90   1e-16
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...    89   2e-16
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    89   2e-16
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    86   3e-16
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    86   3e-16
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    88   4e-16
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    87   6e-16
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    87   8e-16
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    86   2e-15
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    85   3e-15
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    85   3e-15
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    85   3e-15
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    84   5e-15
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    84   8e-15
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    84   8e-15
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    83   1e-14
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    82   1e-14
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    81   4e-14
tr|O81988|O81988_HORVU Cp31BHv OS=Hordeum vulgare PE=2 SV=1            80   7e-14
tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         80   9e-14

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score = 96.3 bits (238), Expect(2) = 7e-19
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 568 LDG 576
           LDG
Sbjct: 127 LDG 129



 Score = 21.2 bits (43), Expect(2) = 7e-19
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 576 GLIYAGRTLRVN 611
           G  Y GRTLRVN
Sbjct: 129 GSEYGGRTLRVN 140



 Score = 47.0 bits (110), Expect = 9e-04
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +1

Query: 364 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 501
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score = 95.1 bits (235), Expect(2) = 2e-18
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 568 LDG 576
           LDG
Sbjct: 172 LDG 174



 Score = 21.2 bits (43), Expect(2) = 2e-18
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 576 GLIYAGRTLRVN 611
           G  Y GRTLRVN
Sbjct: 174 GSEYGGRTLRVN 185



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +1

Query: 364 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 543
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 544 DCNTAIEKLDG 576
           + +TA+E L+G
Sbjct: 255 EMDTALESLNG 265


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 568 LDG 576
           LDG
Sbjct: 61  LDG 63



 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 33/66 (50%), Positives = 43/66 (65%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 568 LDGG*F 585
           LDG  F
Sbjct: 168 LDGAEF 173


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score = 90.9 bits (224), Expect(2) = 3e-17
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = +1

Query: 340 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 513
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 514 FGFVTMSSVEDCNTAIEKLDG 576
           F FVTM++V+DC   I+ LDG
Sbjct: 159 FAFVTMTTVQDCELVIKNLDG 179



 Score = 21.2 bits (43), Expect(2) = 3e-17
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 576 GLIYAGRTLRVN 611
           G +Y GRT++VN
Sbjct: 179 GSLYGGRTMKVN 190



 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +1

Query: 346 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 513
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 514 FGFVTMSSVEDCNTAIEKLDG 576
           +GFV  S+ E+ + A+  L+G
Sbjct: 250 YGFVCYSTREEMDEALSSLNG 270


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 41/67 (61%), Positives = 54/67 (80%)
 Frame = +1

Query: 388 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 567
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 568 LDGG*FM 588
           LDG  +M
Sbjct: 168 LDGSQYM 174



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 33/71 (46%), Positives = 48/71 (67%)
 Frame = +1

Query: 364 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 543
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 544 DCNTAIEKLDG 576
           +  TA++ L+G
Sbjct: 251 ELETALQSLNG 261


>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 264

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 44/82 (53%), Positives = 65/82 (79%)
 Frame = +1

Query: 352 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 531
           R  G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73  RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131

Query: 532 SSVEDCNTAIEKLDGG*FMLEG 597
           SSVE+   A+++ +G  ++L+G
Sbjct: 132 SSVEEVEVAVDQFNG--YVLDG 151



 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
 Frame = +1

Query: 229 GYGVVGQAHAELSVEEVQALXXXXXXXXXXXXXXXXNG--PSFRDNGPPFGE----SVAK 390
           G+G V  +    SVEEV+                  N   P  RD   P  +       +
Sbjct: 125 GFGFVTMS----SVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDANR 180

Query: 391 LYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKL 570
           +YVGNL W  ++  LA +F + G V    +IYD+ESGRSRGFGFVT  S E+   AI  L
Sbjct: 181 VYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNL 240

Query: 571 DG 576
           DG
Sbjct: 241 DG 242


>tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativa
           GN=OSJNBb0048D20.12 PE=4 SV=1
          Length = 265

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +1

Query: 361 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 540
           G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79  GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 541 EDCNTAIEKLDGG*FMLEG 597
           E+   A+E+ +G  ++L+G
Sbjct: 138 EEVEAAVEQFNG--YILDG 154



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +1

Query: 367 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 546
           P GE+  ++YVGNL W  ++  LA +F   G V   +VIYD+ESGRSRGFGFVT  S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 547 CNTAIEKLDG 576
              A+  LDG
Sbjct: 234 VENAVSNLDG 243


>tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0376600 PE=2 SV=1
          Length = 265

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +1

Query: 361 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 540
           G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79  GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 541 EDCNTAIEKLDGG*FMLEG 597
           E+   A+E+ +G  ++L+G
Sbjct: 138 EEVEAAVEQFNG--YILDG 154



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +1

Query: 367 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 546
           P GE+  ++YVGNL W  ++  LA +F   G V   +VIYD+ESGRSRGFGFVT  S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 547 CNTAIEKLDG 576
              A+  LDG
Sbjct: 234 VENAVSNLDG 243


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/74 (56%), Positives = 58/74 (78%)
 Frame = +1

Query: 355 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 534
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 535 SVEDCNTAIEKLDG 576
           S E+   A+E+ +G
Sbjct: 129 SAEEAEAAVEQFNG 142



 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = +1

Query: 361 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 540
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 541 EDCNTAIEKLDG 576
           ++ N AI  LDG
Sbjct: 236 QEVNNAISNLDG 247


>tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11785 PE=4 SV=1
          Length = 265

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +1

Query: 361 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 540
           G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79  GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 541 EDCNTAIEKLDGG*FMLEG 597
           E+   A+E+ +G  ++L+G
Sbjct: 138 EEVEAAVEQFNG--YILDG 154



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +1

Query: 367 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 546
           P GE+  ++YVGNL W  ++  LA +F   G V   +VIYD+ESGRSRGFGFVT  S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 547 CNTAIEKLDG 576
              A+  LDG
Sbjct: 234 VENAVSNLDG 243