DK956529 |
Clone id |
TST39A01NGRL0025_P17 |
Library |
TST39 |
Length |
693 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_P17. 5' end sequence. |
Accession |
DK956529 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1715Contig1 |
Sequence |
GGCGCTAATACTCGGTGCTCCGTCACTGTTCACTCGCTTGCAGTTCGCAGCAGAGACGCC CGCATGCTCCTCCTTCTCACAGACTCAATGGAGCTCCAAACACCATTTCTGTCCCGTTGC AACGTCCTCCGTACCCTTCCCTACTCCCTCCGAGCCCGCCTCGCCACCAAAGAAGATTCT GACAATGAAAAAAGGGGATATTGTTAGAGTGGACAAGGAGAAGTATCTGAACAGTGTTGA GTATCTAGCATTGGGACATCCGCTAAATTTCAAGGGTGTAGACTACATTTATGAAGACAG AGGGGAGATTCTGGACGTACGCATTTTTGAAACTGGGGAATATGCACTGTTAGGTTGGGC TGGAATATCAACTTCACCAGCTTGGCTCCCCACTTATATGCTCATCAAGTCAGAAAAACT TTCATACAAAAGAACATGAGGCATATTAGTGTGTTACTTTCTGCTTCTTGTCGGATATGG GAGTTCCAGAAAGAGATGGATGTATTATATGTAACCTACAAAGCTACTGTAAATCAGATG CTGGGAACCCTTTACATGTAAAATTTTGTTAAACCACTGCATGGAAAATGGCCAACATTT CTTGTATTATGCTTTATTAAGAAATGTCTATTGGTCATGCATTTATTGCCATAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7NFI1 |
Definition |
sp|Q7NFI1|NDHO_GLOVI NAD(P)H-quinone oxidoreductase subunit O OS=Gloeobacter violaceus |
Align length |
78 |
Score (bit) |
48.5 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5JN29 |
Definition |
tr|Q5JN29|Q5JN29_ORYSJ cDNA clone:001-014-G10, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
88 |
Score (bit) |
147.0 |
E-value |
6.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956529|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_P17, 5' (652 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5JN29|Q5JN29_ORYSJ cDNA clone:001-014-G10, full insert seque... 147 6e-34 tr|A2WZB6|A2WZB6_ORYSI Putative uncharacterized protein OS=Oryza... 147 6e-34 tr|B7FML2|B7FML2_MEDTR Putative uncharacterized protein OS=Medic... 145 2e-33 tr|B6SK44|B6SK44_MAIZE Putative uncharacterized protein OS=Zea m... 145 3e-33 tr|A9PJG3|A9PJG3_POPJC Putative uncharacterized protein OS=Popul... 144 5e-33 tr|A3A1R1|A3A1R1_ORYSJ Putative uncharacterized protein OS=Oryza... 144 6e-33 tr|Q9S829|Q9S829_ARATH Putative uncharacterized protein F9E10.27... 143 8e-33 tr|A7QB50|A7QB50_VITVI Chromosome chr4 scaffold_73, whole genome... 143 1e-32 tr|A9TH99|A9TH99_PHYPA Predicted protein OS=Physcomitrella paten... 138 3e-31 tr|A5ARX7|A5ARX7_VITVI Putative uncharacterized protein OS=Vitis... 132 2e-29 tr|B4WSJ3|B4WSJ3_9SYNE Putative uncharacterized protein OS=Synec... 50 2e-04 tr|A0ZB94|A0ZB94_NODSP Putative uncharacterized protein OS=Nodul... 43 0.019 tr|B5W4Y7|B5W4Y7_SPIMA Putative uncharacterized protein OS=Arthr... 40 0.095 tr|A3IMN4|A3IMN4_9CHRO Putative uncharacterized protein OS=Cyano... 40 0.12 tr|Q4C8N7|Q4C8N7_CROWT Putative uncharacterized protein OS=Croco... 40 0.16 tr|B5IKR8|B5IKR8_9CHRO Putative uncharacterized protein OS=Cyano... 38 0.47 tr|B8HX52|B8HX52_9CHRO Putative uncharacterized protein OS=Cyano... 37 0.81 tr|B0N5S5|B0N5S5_9FIRM Putative uncharacterized protein OS=Clost... 37 0.81 tr|Q05VW9|Q05VW9_9SYNE Putative uncharacterized protein OS=Synec... 37 1.1 tr|B7JVP1|B7JVP1_SYNP8 Component of NDH complex OS=Synechococcus... 37 1.1 tr|B4BVZ3|B4BVZ3_9CHRO Component of NDH complex OS=Cyanothece sp... 37 1.1 tr|B4B6Q4|B4B6Q4_9CHRO Component of NDH complex OS=Cyanothece sp... 37 1.4 tr|B7KGC8|B7KGC8_9CHRO Component of NDH complex OS=Cyanothece sp... 36 2.3 tr|A0Z0A1|A0Z0A1_9CYAN Putative uncharacterized protein OS=Lyngb... 36 2.3 tr|B4VQR5|B4VQR5_9CYAN Putative uncharacterized protein OS=Micro... 35 4.0 tr|A8X177|A8X177_CAEBR Putative uncharacterized protein OS=Caeno... 35 5.2 tr|A9I1D9|A9I1D9_BORPD Putative uncharacterized protein OS=Borde... 34 8.9
>tr|Q5JN29|Q5JN29_ORYSJ cDNA clone:001-014-G10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0401G10.21-1 PE=2 SV=1 Length = 164
Score = 147 bits (371), Expect = 6e-34 Identities = 66/88 (75%), Positives = 77/88 (87%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP FKG+DYIYEDRGE+LD+RIFETGEYAL Sbjct: 76 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPFFKGLDYIYEDRGEVLDIRIFETGEYAL 135
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 + W GI T PAWLPTYMLIKS+KL Y+R Sbjct: 136 IAWVGIPTPPAWLPTYMLIKSDKLDYER 163
>tr|A2WZB6|A2WZB6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05288 PE=4 SV=1 Length = 164
Score = 147 bits (371), Expect = 6e-34 Identities = 66/88 (75%), Positives = 77/88 (87%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP FKG+DYIYEDRGE+LD+RIFETGEYAL Sbjct: 76 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPFFKGLDYIYEDRGEVLDIRIFETGEYAL 135
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 + W GI T PAWLPTYMLIKS+KL Y+R Sbjct: 136 IAWVGIPTPPAWLPTYMLIKSDKLDYER 163
>tr|B7FML2|B7FML2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 167
Score = 145 bits (366), Expect = 2e-33 Identities = 64/88 (72%), Positives = 79/88 (89%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP +KG+DYIYEDRGE+LD+RIFETGE+AL Sbjct: 79 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEHAL 138
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 + W G+ T+PAWLPTYMLIKSEKL+Y+R Sbjct: 139 VAWVGVPTAPAWLPTYMLIKSEKLNYER 166
>tr|B6SK44|B6SK44_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 156
Score = 145 bits (365), Expect = 3e-33 Identities = 65/88 (73%), Positives = 78/88 (88%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP +KG+DYIYEDRGE+LD+R+FETGEYAL Sbjct: 68 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPFYKGLDYIYEDRGEVLDIRVFETGEYAL 127
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 +GW GI T+PAWLPT MLIKSEKL Y+R Sbjct: 128 VGWVGIPTAPAWLPTDMLIKSEKLVYER 155
>tr|A9PJG3|A9PJG3_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 157
Score = 144 bits (363), Expect = 5e-33 Identities = 66/88 (75%), Positives = 78/88 (88%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K I +MKKG IVRVDKEKYLNSV YL++GHP +KG+DYIYEDRGE+LD+RIFETGEYAL Sbjct: 69 KPIYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYAL 128
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 + W G+ T+PAWLPT MLIKSEKL+Y+R Sbjct: 129 VSWVGVPTAPAWLPTDMLIKSEKLNYER 156
>tr|A3A1R1|A3A1R1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004733 PE=4 SV=1 Length = 89
Score = 144 bits (362), Expect = 6e-33 Identities = 65/86 (75%), Positives = 75/86 (87%) Frame = +2
Query: 176 ILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYALLG 355 I +KKG IVRVDKEKYLNS+ YL++GHP FKG+DYIYEDRGE+LD+RIFETGEYAL+ Sbjct: 3 IAKVKKGQIVRVDKEKYLNSINYLSVGHPPFFKGLDYIYEDRGEVLDIRIFETGEYALIA 62
Query: 356 WAGISTSPAWLPTYMLIKSEKLSYKR 433 W GI T PAWLPTYMLIKS+KL Y+R Sbjct: 63 WVGIPTPPAWLPTYMLIKSDKLDYER 88
>tr|Q9S829|Q9S829_ARATH Putative uncharacterized protein F9E10.27 (At1g74880/F9E10_27) (Putative uncharacterized protein At1g74880) (F25A4.15 protein) OS=Arabidopsis thaliana GN=F25A4.15 PE=2 SV=1 Length = 158
Score = 143 bits (361), Expect = 8e-33 Identities = 72/131 (54%), Positives = 88/131 (67%) Frame = +2
Query: 41 QFAAETPACSSFSQTQWSSKHHFCPVATSSVXXXXXXXXXXXXKKILTMKKGDIVRVDKE 220 QF + A TQ S P AT + K + +MKKG IVRV+KE Sbjct: 34 QFTVKAEAEKEKQSTQGKSDGEASPAATKT-------PKTLPKKPVYSMKKGQIVRVEKE 86
Query: 221 KYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYALLGWAGISTSPAWLPTYM 400 KYLNS+ YL++GHP +KG+DYIYEDRGE+LD+R+FETGEYAL+GW GI T+PAWLPT M Sbjct: 87 KYLNSINYLSVGHPPFYKGLDYIYEDRGEVLDLRVFETGEYALVGWVGIPTAPAWLPTDM 146
Query: 401 LIKSEKLSYKR 433 LIK EKL Y+R Sbjct: 147 LIKCEKLVYER 157
>tr|A7QB50|A7QB50_VITVI Chromosome chr4 scaffold_73, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034806001 PE=4 SV=1 Length = 158
Score = 143 bits (360), Expect = 1e-32 Identities = 64/88 (72%), Positives = 78/88 (88%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP +KG+DYIYEDRGE+LD+RIFETGEYAL Sbjct: 70 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYAL 129
Query: 350 LGWAGISTSPAWLPTYMLIKSEKLSYKR 433 + W GI T+PAWLPT MLIKS+KL+Y+R Sbjct: 130 IAWVGIPTAPAWLPTDMLIKSDKLNYER 157
>tr|A9TH99|A9TH99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170078 PE=4 SV=1 Length = 176
Score = 138 bits (348), Expect = 3e-31 Identities = 63/84 (75%), Positives = 74/84 (88%) Frame = +2
Query: 182 TMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYALLGWA 361 T+KKG IVRVDKEKYLNSVEYL++GHP F G+DYIYEDRGEIL+ R F+ GEYAL+ WA Sbjct: 92 TLKKGQIVRVDKEKYLNSVEYLSVGHPPYFTGLDYIYEDRGEILNTRFFDHGEYALISWA 151
Query: 362 GISTSPAWLPTYMLIKSEKLSYKR 433 GI T+PAWLPTYMLI +++LSYKR Sbjct: 152 GIPTNPAWLPTYMLIPADRLSYKR 175
>tr|A5ARX7|A5ARX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017539 PE=4 SV=1 Length = 199
Score = 132 bits (331), Expect = 2e-29 Identities = 59/80 (73%), Positives = 70/80 (87%) Frame = +2
Query: 170 KKILTMKKGDIVRVDKEKYLNSVEYLALGHPLNFKGVDYIYEDRGEILDVRIFETGEYAL 349 K + +MKKG IVRVDKEKYLNS+ YL++GHP +KG+DYIYEDRGE+LD+RIFETGEYAL Sbjct: 70 KPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYAL 129
Query: 350 LGWAGISTSPAWLPTYMLIK 409 + W GI T+PAWLPT MLIK Sbjct: 130 IAWVGIPTAPAWLPTDMLIK 149
|