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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956566
Clone id TST39A01NGRL0026_B06
Library
Length 613
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_B06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCCTCGCTGCCGCGTCCGTC
TCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATGCTCTTCGCGAGAAGGTC
CCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTACTGGTATGGGCCCGATCGCCCC
AAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCAAGGGCGAGTTCCCTGGC
GATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGGCATTTGCTAAGAACAGG
GCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTTTGGGATGCATCTTCCCA
GAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAGTCTGGTTCAAGGCTGGA
GCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACCCCAACCTTGTTCATGCA
CAGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTTGATGGGAGCTGCAGAGGGCTAC
CGCATCAATGGTTTATCAGGAGTTGGTGAGGGTGGTGACTTGTATCCTGGTGGGCAATAC
TTTGACCCCTTGG
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 175
Score (bit) 293.0
E-value 5.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956566|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_B06, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   293   5e-79
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   289   9e-78
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   255   1e-67
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   250   4e-66
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   250   4e-66
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   250   5e-66
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   250   5e-66
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   248   1e-65
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   248   2e-65
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   246   9e-65
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   245   1e-64
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   245   1e-64
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   244   2e-64
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   244   2e-64
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   244   3e-64
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   244   3e-64
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   244   3e-64
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   244   3e-64
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   244   3e-64
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   243   4e-64
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   243   6e-64
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   243   6e-64
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   243   6e-64
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   243   7e-64
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   242   1e-63
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   242   1e-63
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   242   1e-63
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   241   2e-63
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   241   2e-63
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   240   4e-63

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  293 bits (750), Expect = 5e-79
 Identities = 140/175 (80%), Positives = 153/175 (87%), Gaps = 2/175 (1%)
 Frame = +1

Query: 94  TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 267
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 268 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 447
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 448 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           DYLGNPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG DLYPGGQYFDPL
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPL 197



 Score = 30.8 bits (68), Expect = 5.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 232 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 348
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  289 bits (739), Expect = 9e-78
 Identities = 133/169 (78%), Positives = 146/169 (86%)
 Frame = +1

Query: 106 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 285
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 286 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 465
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 466 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLYPGGQYFDPL
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL 200


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  255 bits (651), Expect = 1e-67
 Identities = 133/180 (73%), Positives = 139/180 (77%), Gaps = 8/180 (4%)
 Frame = +1

Query: 97  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 255
           +N L  KV     RVSM           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 256 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 435
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 436 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           EGGLDYLGNPNLVHAQSILAIWACQVVLMGA EGYR+ G   +GEG D LYPGG  FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGG-GPLGEGLDQLYPGGA-FDPL 196


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  250 bits (639), Expect = 4e-66
 Identities = 124/152 (81%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = +1

Query: 160 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 339
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 340 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 519
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 520 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           MG  EGYR+ G   +GEG D +YPGG  FDPL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPL 195


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  250 bits (639), Expect = 4e-66
 Identities = 124/152 (81%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = +1

Query: 160 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 339
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 340 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 519
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 520 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           MG  EGYR+ G   +GEG D +YPGG  FDPL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPL 195


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  250 bits (638), Expect = 5e-66
 Identities = 132/180 (73%), Positives = 138/180 (76%), Gaps = 8/180 (4%)
 Frame = +1

Query: 97  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 255
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 256 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 435
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 436 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           EGGLDYLGNPNLVHAQSILAIWA QVVLMG  EGYR+ G   +GEG D LYPGG  FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLDPLYPGGA-FDPL 196



 Score = 31.6 bits (70), Expect = 3.4
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 348
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  250 bits (638), Expect = 5e-66
 Identities = 123/158 (77%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
 Frame = +1

Query: 142 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 321
           S  +  WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 322 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 501
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 502 ACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           ACQVVLMG  EGYR+ G   +GEG D +YPGG  FDPL
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLDPIYPGGA-FDPL 197



 Score = 30.4 bits (67), Expect = 7.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 348
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  248 bits (634), Expect = 1e-65
 Identities = 122/152 (80%), Positives = 129/152 (84%), Gaps = 1/152 (0%)
 Frame = +1

Query: 160 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 339
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 340 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 519
           ALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 520 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           MG  EGYR+ G   +GEG D +YPGG  FDPL
Sbjct: 168 MGFVEGYRVGG-GPLGEGLDKIYPGGA-FDPL 197



 Score = 31.6 bits (70), Expect = 3.4
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 348
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  248 bits (633), Expect = 2e-65
 Identities = 127/180 (70%), Positives = 138/180 (76%), Gaps = 8/180 (4%)
 Frame = +1

Query: 97  KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 255
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 256 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 435
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 436 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           EGGLDY GNPNL+HAQSILAIWACQVVLMG  EGYR+ G   +GEG D L PGG  FDPL
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLDPLLPGGA-FDPL 198


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  246 bits (627), Expect = 9e-65
 Identities = 123/164 (75%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
 Frame = +1

Query: 124 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 303
           V + +V+ +   WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR 
Sbjct: 34  VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 304 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 483
           LEVIHSRWAMLGALGC+FPE+  +   V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94  LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 484 SILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 612
           SILAIWACQVVLMGA EGYRI G   +GE  D LYPGG  FDPL
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPL 194



 Score = 30.8 bits (68), Expect = 5.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 348
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 171
Score (bit) 293.0
E-value 7.0e-78
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956566|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_B06, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   293   7e-78
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   291   2e-77
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   290   6e-77
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   290   6e-77
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   288   1e-76
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   288   2e-76
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   287   3e-76
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   287   3e-76
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   286   5e-76
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   286   5e-76
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   286   9e-76
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   285   1e-75
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   285   2e-75
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   284   3e-75
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   284   3e-75
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   283   7e-75
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   283   7e-75
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   282   1e-74
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr...   273   6e-72
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   261   2e-68
tr|Q39340|Q39340_BRANA LHC II Type III chlorophyll a/b binding p...   260   5e-68
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   259   1e-67
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   258   2e-67
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   258   2e-67
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   257   3e-67
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   257   3e-67
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   256   7e-67
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   256   1e-66
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   255   1e-66
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   254   2e-66

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  293 bits (749), Expect = 7e-78
 Identities = 139/171 (81%), Positives = 149/171 (87%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPL
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPL 201


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  291 bits (745), Expect = 2e-77
 Identities = 139/175 (79%), Positives = 149/175 (85%), Gaps = 2/175 (1%)
 Frame = +1

Query: 94  TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 267
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 268 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 447
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 448 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           DYLGNPNLVHAQSILA+   QV+LMG  EGYRINGL GVGEG DLYPGGQYFDPL
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPL 199


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  290 bits (741), Expect = 6e-77
 Identities = 137/171 (80%), Positives = 146/171 (85%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPL
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPL 196


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  290 bits (741), Expect = 6e-77
 Identities = 137/171 (80%), Positives = 146/171 (85%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPL
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPL 201


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  288 bits (738), Expect = 1e-76
 Identities = 135/171 (78%), Positives = 148/171 (86%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVG+G +LYPGGQYFDPL
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPL 196


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26482 PE=4 SV=1
          Length = 266

 Score =  288 bits (736), Expect = 2e-76
 Identities = 134/169 (79%), Positives = 146/169 (86%)
 Frame = +1

Query: 106 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 285
           LR+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 286 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 465
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 466 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPL
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPL 198


>tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding
           protein (Fragment) OS=Brassica napus GN=Lhcb3*1 PE=4
           SV=1
          Length = 202

 Score =  287 bits (735), Expect = 3e-76
 Identities = 135/173 (78%), Positives = 147/173 (84%)
 Frame = +1

Query: 94  TKNALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSA 273
           T N LR+ V +   + +M ++ WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSA
Sbjct: 25  TFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSA 84

Query: 274 DPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDY 453
           DPEAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDY
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDY 144

Query: 454 LGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           LGNPNLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLYPGGQYFDPL
Sbjct: 145 LGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL 197


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  287 bits (735), Expect = 3e-76
 Identities = 136/171 (79%), Positives = 148/171 (86%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPL
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPL 198


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
           japonica GN=P0406F06.32 PE=2 SV=1
          Length = 266

 Score =  286 bits (733), Expect = 5e-76
 Identities = 133/169 (78%), Positives = 146/169 (86%)
 Frame = +1

Query: 106 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 285
           +R+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 286 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 465
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 466 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPL
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPL 198


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  286 bits (733), Expect = 5e-76
 Identities = 136/171 (79%), Positives = 148/171 (86%)
 Frame = +1

Query: 100 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 279
           N LR+ V +   + +M+++ WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 280 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 459
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 460 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPL 612
           NPNLVHAQSILA+   QVVLMG AEG+RINGL GVGEG +LYP GQYFDPL
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLAEGFRINGLDGVGEGNNLYPXGQYFDPL 201