DK956572 |
Clone id |
TST39A01NGRL0026_B12 |
Library |
TST39 |
Length |
650 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_B12. 5' end sequence. |
Accession |
DK956572 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL108Contig1 |
Sequence |
GTTTCTACCGCAACTATGGAAAGACGTTCAAGAAGCCCCGCCGTCCTTATGAGAAGGAGC GGCTCGATGCAGAACTGAAGCTCGTAGGGGAATATGGACTCCGTAACAAGAGAGAACTGT GGAGAGTTCAATATGCATTGAGCCGTATCCGCAACAATGCCCGAATGTTGCTTACACTCG ATGAGAAGAACCCACGCAGAATCTTCGAGGGAGAGGCTCTTCTACGTCGCATGTTCAGAT ATGGTCTTCTAGATGAAAGCCAAAACAAGCTCGATTATGTTTTGGCATTGACAGTTGAGA ACTTCTTGGAACGCCGTCTGCAGACTCTTGTCTTCAAGTCGGGCATGGCCAAATCGATTC ATCATGCCCGAGTGCTTATCAAGCAGAGGCATATTAGGGTTGGCAAGCAAGTTGTCAATG TTGCCTCTTTTCTGGTGAGAGTGGATTCACAGAAGCATATTGATTTTGCACTGTCGAGTC CCTTCGGTGGCGGTAGACCTGGCCGTGTGAAGAGAAGGAACATGAAGGCTGCCTCTAAGA AGGCTGCTGGTGGTGAAGAGGAGGAGGATGAAGATTAAAGTGACAGAGCTTCTGTTGTTT GAAGTCAAGAAACAAAGAGAGAGACTAGACATTTTTGACTGTTAACTTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FLF0 |
Definition |
sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2 OS=Arabidopsis thaliana |
Align length |
173 |
Score (bit) |
318.0 |
E-value |
2.0e-86 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMP0 |
Definition |
tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
174 |
Score (bit) |
325.0 |
E-value |
1.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956572|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_B12, 5' (650 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea... 325 1e-87 tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=So... 325 1e-87 tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solan... 325 1e-87 tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genom... 325 2e-87 tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medic... 324 3e-87 tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea... 323 6e-87 tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella paten... 323 7e-87 tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella paten... 323 7e-87 tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella paten... 322 1e-86 tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Arte... 322 1e-86 tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Popul... 322 2e-86 tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Popul... 322 2e-86 tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome... 322 2e-86 tr|A9RKT7|A9RKT7_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86 tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus ... 321 3e-86 tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Popul... 320 4e-86 tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Popul... 320 4e-86 tr|B3TM27|B3TM27_ELAGV Ribosomal protein OS=Elaeis guineensis va... 319 8e-86 tr|A9PA82|A9PA82_POPTR Putative uncharacterized protein OS=Popul... 318 2e-85 tr|A9S7K2|A9S7K2_PHYPA Predicted protein OS=Physcomitrella paten... 315 2e-84 tr|B3TM34|B3TM34_ELAGV 40S ribosomal protein S9 OS=Elaeis guinee... 314 3e-84 tr|Q2R1J8|Q2R1J8_ORYSJ 40S ribosomal protein S9, putative, expre... 311 2e-83 tr|A2ZFU3|A2ZFU3_ORYSI Putative uncharacterized protein OS=Oryza... 311 2e-83 tr|Q676Y9|Q676Y9_HYAOR 40S ribosomal protein S9 OS=Hyacinthus or... 311 3e-83 tr|B6SZS2|B6SZS2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 309 8e-83 tr|B6T7B2|B6T7B2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 307 3e-82 tr|A8JGF8|A8JGF8_CHLRE Ribosomal protein S9, component of cytoso... 307 4e-82 tr|B6T8L0|B6T8L0_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 305 1e-81 tr|B6TH64|B6TH64_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 304 3e-81 tr|B8ANT6|B8ANT6_ORYSI Putative uncharacterized protein OS=Oryza... 302 1e-80
>tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 325 bits (834), Expect = 1e-87 Identities = 161/174 (92%), Positives = 169/174 (97%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARMLLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARMLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EKNPRRIFEGEALLRRM RYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGMAKSIH Sbjct: 66 EKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 HARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+NM Sbjct: 126 HARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNM 179
>tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum GN=SDM1_52t00012 PE=3 SV=1 Length = 197
Score = 325 bits (833), Expect = 1e-87 Identities = 162/173 (93%), Positives = 170/173 (98%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARMLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GMAKSIH Sbjct: 66 EKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 521 HARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 126 HARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 197
Score = 325 bits (833), Expect = 1e-87 Identities = 162/173 (93%), Positives = 170/173 (98%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARMLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GMAKSIH Sbjct: 66 EKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 521 HARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 126 HARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00000124001 PE=3 SV=1 Length = 197
Score = 325 bits (832), Expect = 2e-87 Identities = 161/173 (93%), Positives = 168/173 (97%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARMLLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARMLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EKNPRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH Sbjct: 66 EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 521 HARVLI+QRHIRVG+QVVN+ SFLVR+DSQKHIDF+L+SP GGGRPGRVKR+N Sbjct: 126 HARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKN 178
>tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 197
Score = 324 bits (830), Expect = 3e-87 Identities = 159/174 (91%), Positives = 170/174 (97%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRNNAR LLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARTLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EKNPRRIFEGEALLRRMF++GLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH Sbjct: 66 EKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 HARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGG PGRVKR+N+ Sbjct: 126 HARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNL 179
>tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 323 bits (828), Expect = 6e-87 Identities = 159/174 (91%), Positives = 169/174 (97%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARMLLTLD Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARMLLTLD 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EKNPRRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGMAKSIH Sbjct: 66 EKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 HARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+N+ Sbjct: 126 HARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 179
>tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_213657 PE=3 SV=1 Length = 198
Score = 323 bits (827), Expect = 7e-87 Identities = 160/173 (92%), Positives = 169/173 (97%) Frame = +3
Query: 6 YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 185 +RNYGKTFKKPRRP+EKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE Sbjct: 7 FRNYGKTFKKPRRPFEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 66
Query: 186 KNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHH 365 KN RRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGMAKSIHH Sbjct: 67 KNTRRIFEGEALLRRMNRYGLLDENQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHH 126
Query: 366 ARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 ARVLIKQRHIRVGKQ+V+V SF+VRVDSQKH+DFALSSP GGGRPGRVKR+NM Sbjct: 127 ARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHVDFALSSPLGGGRPGRVKRKNM 179
>tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159560 PE=3 SV=1 Length = 198
Score = 323 bits (827), Expect = 7e-87 Identities = 160/173 (92%), Positives = 169/173 (97%) Frame = +3
Query: 6 YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 185 +RNYGKTFKKPRRP+EKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE Sbjct: 7 FRNYGKTFKKPRRPFEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 66
Query: 186 KNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHH 365 KN RRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGMAKSIHH Sbjct: 67 KNTRRIFEGEALLRRMNRYGLLDENQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHH 126
Query: 366 ARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 ARVLIKQRHIRVGKQ+V+V SF+VRVDSQKH+DFALSSP GGGRPGRVKR+NM Sbjct: 127 ARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHVDFALSSPLGGGRPGRVKRKNM 179
>tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60181 PE=3 SV=1 Length = 197
Score = 322 bits (825), Expect = 1e-86 Identities = 159/173 (91%), Positives = 169/173 (97%) Frame = +3
Query: 6 YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 185 +RNYGKTFKKPRRP+EKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE Sbjct: 7 FRNYGKTFKKPRRPFEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLDE 66
Query: 186 KNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHH 365 KN RRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQT+VFKSGMAKSIHH Sbjct: 67 KNTRRIFEGEALLRRMNRYGLLDENQSKLDYVLALTVENFLERRLQTIVFKSGMAKSIHH 126
Query: 366 ARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 524 ARVLIKQRHIRVGKQ+V+V SF+VRVDSQKH+DFALSSP GGGRPGRVKR+NM Sbjct: 127 ARVLIKQRHIRVGKQIVDVPSFMVRVDSQKHVDFALSSPLGGGRPGRVKRKNM 179
>tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Artemisia annua PE=2 SV=1 Length = 197
Score = 322 bits (825), Expect = 1e-86 Identities = 160/173 (92%), Positives = 169/173 (97%) Frame = +3
Query: 3 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARMLLTLD 182 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARMLLTL+ Sbjct: 6 FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARMLLTLE 65
Query: 183 EKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 362 EK+PRRIFEGEAL+RRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GMAKSIH Sbjct: 66 EKDPRRIFEGEALMRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGMAKSIH 125
Query: 363 HARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 521 HARVLIKQRHIRVG+QVVNV SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 126 HARVLIKQRHIRVGRQVVNVPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
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