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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956583
Clone id TST39A01NGRL0026_B23
Library
Length 625
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_B23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTACAGTCTACTGCTTGTGAAAGAGCTCTCCTAGAGACTCATCCCTCCTCGTGGTCTCTG
CTACCCACAACCTCCCCACATCGCCTGCACAAATAATGGCAGCTTTTCCTCAACTCTAGC
TTCTCGTCTCGTTCTCCCCTTTAATTGTCTCATCAGCATCAGACAGCAGTTTCGCAGTAG
CTATCACCGTCTCCTCTGCTCGCCTTTCCATAAATAGCCTCGAGCCTATGGAAAGAGCAA
GCTTTTGAGGAACGTCGACCTACGTCTGCAGCTTATAGAGCTCATGCCTGTAGCTTAATC
TTCTGAAAACCCTTCAAACAAGGCTCTCCTGCAGCGGCACCTGAAGCCATGAAGTACCTC
CGCTCCGCCGTTGTCTGCTGTTTAGCTCTAGTGCTTGTGTTAGCTGTGCAAGTATGGTTT
CGGCAGCCCCACTTCAGCCGATGCCCTGGCTGGTTTGCTTCCTGCAGAGAGCCCTCGTCC
CTCTTCAGCTACAAGCTCTCCCTTTTTCAGAAGGGCTCACGTGAGGAGCAAGCTAAACGA
GCGCTTCCTCAACATCCTCTTGATCCCCTCACCTTCTCAGAAATTCAGCAGGTGCATACC
GTTCTCACCAATTCGTCTGTTTCTG
■■Homology search results ■■ -
sp_hit_id Q8H1H9
Definition sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana
Align length 21
Score (bit) 32.7
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956583|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_B23, 5'
         (611 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thalian...    33   1.5  
sp|Q9WX75|BCSA5_ACEXY Putative cellulose synthase 3 OS=Acetobact...    31   5.7  
sp|Q9RBJ2|BCSA4_ACEXY Putative cellulose synthase 2 OS=Acetobact...    31   5.7  

>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana
           GN=At1g62810 PE=2 SV=1
          Length = 712

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +1

Query: 547 PQHPLDPLTFSEIQQVHTVLT 609
           P HPLDPLT  EI +V T+L+
Sbjct: 58  PHHPLDPLTVREINRVRTILS 78


>sp|Q9WX75|BCSA5_ACEXY Putative cellulose synthase 3 OS=Acetobacter
           xylinus GN=bcsABII-B PE=3 SV=1
          Length = 1518

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = -2

Query: 481 GTRALCRKQTSQGIG*SGAAETILAQLTQALELNSRQRRSGGTSWLQVPLQESL 320
           G+ A+ R++   GIG   A ET+      AL++   QRR  GT++L+ PL   L
Sbjct: 306 GSCAIIRREAVMGIG-GFATETVTEDAHTALKM---QRRGWGTAYLREPLAAGL 355


>sp|Q9RBJ2|BCSA4_ACEXY Putative cellulose synthase 2 OS=Acetobacter
           xylinus GN=bcsABII-A PE=3 SV=1
          Length = 1518

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = -2

Query: 481 GTRALCRKQTSQGIG*SGAAETILAQLTQALELNSRQRRSGGTSWLQVPLQESL 320
           G+ A+ R++   GIG   A ET+      AL++   QRR  GT++L+ PL   L
Sbjct: 306 GSCAIIRREAVMGIG-GFATETVTEDAHTALKM---QRRGWGTAYLREPLAAGL 355
tr_hit_id B8BKH0
Definition tr|B8BKH0|B8BKH0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 62
Score (bit) 36.6
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956583|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_B23, 5'
         (611 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8BKH0|B8BKH0_ORYSI Putative uncharacterized protein OS=Oryza...    37   1.2  
tr|A8L8F0|A8L8F0_FRASN Asp-tRNAAsn/Glu-tRNAGln amidotransferase ...    35   4.5  
tr|Q2R4C6|Q2R4C6_ORYSJ NB-ARC domain containing protein, express...    34   5.8  
tr|Q0ISQ9|Q0ISQ9_ORYSJ Os11g0479100 protein OS=Oryza sativa subs...    34   5.8  
tr|A3CB89|A3CB89_ORYSJ Putative uncharacterized protein OS=Oryza...    34   5.8  
tr|A7NWM0|A7NWM0_VITVI Chromosome chr5 scaffold_2, whole genome ...    34   7.6  
tr|A5BR05|A5BR05_VITVI Copper amine oxidase OS=Vitis vinifera GN...    34   7.6  
tr|Q9SW88|Q9SW88_CANLI Amine oxidase OS=Canavalia lineata PE=2 SV=1    33   10.0 
tr|A7QKE1|A7QKE1_VITVI Copper amine oxidase OS=Vitis vinifera GN...    33   10.0 
tr|Q2UNV0|Q2UNV0_ASPOR HLH transcription factor EBF/Olf-1 and re...    33   10.0 
tr|B8NID5|B8NID5_ASPFL Membrane-tethered transcription factor (S...    33   10.0 

>tr|B8BKH0|B8BKH0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_36094 PE=4 SV=1
          Length = 375

 Score = 36.6 bits (83), Expect = 1.2
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -2

Query: 196 EETVIATAKLLSDADETIKGENETRS*S*GKAAIICAGDVGRLWVAETTRRDESLGELFH 17
           EE   A  KLL+D  ETI GEN +        AI+  G +G+  +A+    D+++ E F 
Sbjct: 233 EEDTSALVKLLTDDKETIHGENNSL-----LLAIVGVGGIGKTTLAKNIFNDDAIQEKFD 287

Query: 16  KQ 11
           K+
Sbjct: 288 KK 289


>tr|A8L8F0|A8L8F0_FRASN Asp-tRNAAsn/Glu-tRNAGln amidotransferase A
           subunit and related amidase-like protein OS=Frankia sp.
           (strain EAN1pec) GN=Franean1_4240 PE=4 SV=1
          Length = 156

 Score = 34.7 bits (78), Expect = 4.5
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -3

Query: 498 ELVAEEGRG--LSAGSKPARASAEVGLPKPYLHS*H 397
           +LVA  GRG   +AG +PAR  A +G P P +H+ H
Sbjct: 120 QLVAAHGRGGPAAAGRRPARTGAALGAPHPAVHAGH 155


>tr|Q2R4C6|Q2R4C6_ORYSJ NB-ARC domain containing protein, expressed
           OS=Oryza sativa subsp. japonica GN=LOC_Os11g28950 PE=4
           SV=2
          Length = 1070

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 196 EETVIATAKLLSDADETIKGENETRS*S*GKAAIICAGDVGRLWVAETTRRDESLGELFH 17
           EE   A  KLL+D  ETI  EN +        AI+  G +G+  +A+    D+++ E F 
Sbjct: 172 EEDTSALVKLLTDDKETIHAENNSL-----LLAIVGVGGIGKTTLAKNIFNDDAIQEKFD 226

Query: 16  KQ 11
           K+
Sbjct: 227 KK 228


>tr|Q0ISQ9|Q0ISQ9_ORYSJ Os11g0479100 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0479100 PE=4 SV=1
          Length = 1114

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 196 EETVIATAKLLSDADETIKGENETRS*S*GKAAIICAGDVGRLWVAETTRRDESLGELFH 17
           EE   A  KLL+D  ETI  EN +        AI+  G +G+  +A+    D+++ E F 
Sbjct: 216 EEDTSALVKLLTDDKETIHAENNSL-----LLAIVGVGGIGKTTLAKNIFNDDAIQEKFD 270

Query: 16  KQ 11
           K+
Sbjct: 271 KK 272


>tr|A3CB89|A3CB89_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032561 PE=4 SV=1
          Length = 1020

 Score = 34.3 bits (77), Expect = 5.8
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 196 EETVIATAKLLSDADETIKGENETRS*S*GKAAIICAGDVGRLWVAETTRRDESLGELFH 17
           EE   A  KLL+D  ETI  EN +        AI+  G +G+  +A+    D+++ E F 
Sbjct: 172 EEDTSALVKLLTDDKETIHAENNSL-----LLAIVGVGGIGKTTLAKNIFNDDAIQEKFD 226

Query: 16  KQ 11
           K+
Sbjct: 227 KK 228


>tr|A7NWM0|A7NWM0_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019977001
           PE=3 SV=1
          Length = 676

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 484 FSYKLSLFQKGSREEQAKRALPQHPLDPLTFSEIQQVHTVLT 609
           F++ LS+F   S           HPLDPLT  E+ QV T++T
Sbjct: 14  FTFPLSIFSAASIHFH-------HPLDPLTLQELDQVRTIIT 48


>tr|A5BR05|A5BR05_VITVI Copper amine oxidase OS=Vitis vinifera
           GN=VITISV_040530 PE=3 SV=1
          Length = 1265

 Score = 33.9 bits (76), Expect = 7.6
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 484 FSYKLSLFQKGSREEQAKRALPQHPLDPLTFSEIQQVHTVLT 609
           F++ LS+F   S           HPLDPLT  E+ QV T++T
Sbjct: 14  FTFPLSIFSAASIHFH-------HPLDPLTLQELDQVRTIIT 48


>tr|Q9SW88|Q9SW88_CANLI Amine oxidase OS=Canavalia lineata PE=2 SV=1
          Length = 735

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 454 FASCREPSSLFSYKLSLFQKGSREEQAKRALPQHPLDPLTFSEIQQVHTVLT 609
           F+S  +P  +       +Q     E     +PQHPLDPLT  E  +V  +L+
Sbjct: 52  FSSSTKPKVIKKQPSFTYQNNHESE-----VPQHPLDPLTIQEFNKVRNILS 98


>tr|A7QKE1|A7QKE1_VITVI Copper amine oxidase OS=Vitis vinifera
           GN=GSVIVT00001079001 PE=3 SV=1
          Length = 727

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 544 LPQHPLDPLTFSEIQQVHTVLT 609
           +P HPLDPLT  EI +V T+L+
Sbjct: 74  VPHHPLDPLTVQEINRVRTILS 95


>tr|Q2UNV0|Q2UNV0_ASPOR HLH transcription factor EBF/Olf-1 and
           related DNA binding proteins OS=Aspergillus oryzae
           GN=AO090001000222 PE=4 SV=1
          Length = 1194

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = +2

Query: 416 GFGSPT-----SADALAGLLPAESPRPSSATSSPFFRRAHVRSKLNERFLNILLIPSPS 577
           GF SP      +A A++G  P   P P+S  S+PFF     + +  + F+   L+ +P+
Sbjct: 494 GFASPVERPFVTASAMSGQFPNSPPTPNSGDSNPFFNPNSQQQQSLDSFIQQQLMSAPN 552