DK956585
Clone id TST39A01NGRL0026_C01
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_C01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AATAAGGTTTGCTAGAAGAGTATGGTGCAGCCTCGCAATTATCTGCTCTTGACTTGCCAT
GCAGCTAATGAGACGGTGCAATTGTATCAGCTATCTAGATGGGCCAGAGCAAATGGCTAC
CTTGGAGATAAGACGCCTACCACAAATGAGATGCCTGCAAAAGAGACGCCGCCTGCTGCA
CAACCAGCAAAGGCGTCTCAAAGCAAAGAGTAAAGCTGAAGGCCTCAAATCAAAGAGTAA
GGCTCTACAGCATACGAAAAATAATGTTCCTCTATAATGGTGCCACATTCTTTGTTGCTG
ATGATGACGAAAACTGGGCTGCCACAACCAAAGGAGGCCGGAGTGCAAAATAATTCGATC
TCGGAATTGCAGTCTTTGGAATGTAAACAGTTCATTTTAGGATGGTAAATAAGGTTTGCT
AGAAGAGTATGGTGGTGATTGAAAGTTCGGAATTATTCTGCTTCCAAAACCNACNANAAA
AAAAAGAAGAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q3ZCG2
Definition sp|Q3ZCG2|BR44L_BOVIN Brain protein 44-like protein OS=Bos taurus
Align length 28
Score (bit) 37.4
E-value 0.035
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956585|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_C01, 5'
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3ZCG2|BR44L_BOVIN Brain protein 44-like protein OS=Bos tauru... 37 0.035
sp|O74847|YCYB_SCHPO UPF0041 protein C1235.11 OS=Schizosaccharom... 37 0.046
sp|Q9Y5U8|BR44L_HUMAN Brain protein 44-like protein OS=Homo sapi... 37 0.060
sp|Q55GU4|U041A_DICDI UPF0041 protein A OS=Dictyostelium discoid... 36 0.10
sp|P53157|YGI0_YEAST UPF0041 protein YGL080W OS=Saccharomyces ce... 35 0.18
sp|P63031|BR44L_RAT Brain protein 44-like protein OS=Rattus norv... 35 0.18
sp|P63030|BR44L_MOUSE Brain protein 44-like protein OS=Mus muscu... 35 0.18
sp|Q21828|YNFD_CAEEL UPF0041 protein R07E5.13 OS=Caenorhabditis ... 33 0.51
sp|Q2M2T3|BR44M_BOVIN Brain protein 44-like protein 2 OS=Bos tau... 32 1.5
sp|P44885|MGLC_HAEIN Galactoside transport system permease prote... 31 3.2
sp|Q6JQN1|ACD10_HUMAN Acyl-CoA dehydrogenase family member 10 OS... 30 7.4
sp|P23200|MGLC_ECOLI Galactoside transport system permease prote... 29 9.4

>sp|Q3ZCG2|BR44L_BOVIN Brain protein 44-like protein OS=Bos taurus
GN=BRP44L PE=1 SV=1
Length = 109

Score = 37.4 bits (85), Expect = 0.035
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSRWAR 108
VQPRN+LL CHA NE QL Q R R
Sbjct: 73 VQPRNWLLFACHATNEVAQLIQGGRLIR 100


>sp|O74847|YCYB_SCHPO UPF0041 protein C1235.11
OS=Schizosaccharomyces pombe GN=SPCC1235.11 PE=2 SV=3
Length = 141

Score = 37.0 bits (84), Expect = 0.046
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQ 90
MV PRNYLLL CHA N TVQ Q
Sbjct: 82 MVSPRNYLLLGCHAFNTTVQTAQ 104


>sp|Q9Y5U8|BR44L_HUMAN Brain protein 44-like protein OS=Homo sapiens
GN=BRP44L PE=1 SV=1
Length = 109

Score = 36.6 bits (83), Expect = 0.060
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSR 99
VQPRN+LL CHA NE QL Q R
Sbjct: 73 VQPRNWLLFACHATNEVAQLIQGGR 97


>sp|Q55GU4|U041A_DICDI UPF0041 protein A OS=Dictyostelium discoideum
GN=DDB_G0267508 PE=3 SV=2
Length = 97

Score = 35.8 bits (81), Expect = 0.10
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSRWAR 108
+ P NY LL CH ANE QL QL R+ +
Sbjct: 57 IYPPNYWLLGCHVANEVAQLTQLGRYGK 84


>sp|P53157|YGI0_YEAST UPF0041 protein YGL080W OS=Saccharomyces
cerevisiae GN=YGL080W PE=1 SV=1
Length = 130

Score = 35.0 bits (79), Expect = 0.18
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNEMPAKE 165
V P+NYLL CH NET QL Q R+ + + D+ + KE
Sbjct: 77 VSPKNYLLFGCHLINETAQLAQGYRFLKYTYFTTDEEKKALDKEWKE 123


>sp|P63031|BR44L_RAT Brain protein 44-like protein OS=Rattus
norvegicus GN=Brp44l PE=2 SV=1
Length = 109

Score = 35.0 bits (79), Expect = 0.18
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSR 99
VQPRN+LL CH NE QL Q R
Sbjct: 73 VQPRNWLLFACHVTNEVAQLIQGGR 97


>sp|P63030|BR44L_MOUSE Brain protein 44-like protein OS=Mus musculus
GN=Brp44l PE=1 SV=1
Length = 109

Score = 35.0 bits (79), Expect = 0.18
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSR 99
VQPRN+LL CH NE QL Q R
Sbjct: 73 VQPRNWLLFACHVTNEVAQLIQGGR 97


>sp|Q21828|YNFD_CAEEL UPF0041 protein R07E5.13 OS=Caenorhabditis
elegans GN=R07E5.13 PE=2 SV=1
Length = 160

Score = 33.5 bits (75), Expect = 0.51
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSRWARAN 114
VQPRN LL CH AN + Q QL R+ N
Sbjct: 75 VQPRNLLLFACHFANFSAQGAQLGRFVNHN 104


>sp|Q2M2T3|BR44M_BOVIN Brain protein 44-like protein 2 OS=Bos taurus
PE=2 SV=1
Length = 181

Score = 32.0 bits (71), Expect = 1.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1

Query: 25 VQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTT 144
VQPRN LL+ CH N Q Q R+ + Y G T T
Sbjct: 75 VQPRNLLLMACHGTNIVAQSMQAGRYLNYH-YGGGTTAAT 113


>sp|P44885|MGLC_HAEIN Galactoside transport system permease protein
mglC OS=Haemophilus influenzae GN=mglC PE=3 SV=1
Length = 336

Score = 30.8 bits (68), Expect = 3.2
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -2

Query: 197 DAFAGCAAGGVSFA-GISFVVGVLS 126
DA A C GGVSFA G+ V+GV++
Sbjct: 267 DAIAACVVGGVSFAGGVGTVIGVIT 291


tr_hit_id B6UEL2
Definition tr|B6UEL2|B6UEL2_MAIZE Brain protein 44-like protein OS=Zea mays
Align length 43
Score (bit) 73.2
E-value 6.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956585|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_C01, 5'
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6UEL2|B6UEL2_MAIZE Brain protein 44-like protein OS=Zea mays... 73 6e-12
tr|Q949R9|Q949R9_ARATH Putative uncharacterized protein At5g2009... 71 2e-11
tr|Q6H4I2|Q6H4I2_ORYSJ Os09g0373000 protein OS=Oryza sativa subs... 70 4e-11
tr|B8BEY3|B8BEY3_ORYSI Putative uncharacterized protein OS=Oryza... 70 4e-11
tr|B6T252|B6T252_MAIZE Brain protein 44-like protein OS=Zea mays... 70 4e-11
tr|A3BY81|A3BY81_ORYSJ Putative uncharacterized protein OS=Oryza... 70 4e-11
tr|Q6Z565|Q6Z565_ORYSJ Os08g0412500 protein OS=Oryza sativa subs... 70 5e-11
tr|Q5XLE2|Q5XLE2_MAIZE Brain protein 44-like OS=Zea mays PE=4 SV=1 70 5e-11
tr|B6SX80|B6SX80_MAIZE Brain protein 44-like protein OS=Zea mays... 70 5e-11
tr|B6TQE5|B6TQE5_MAIZE Brain protein 44-like protein OS=Zea mays... 69 2e-10
tr|A5AH05|A5AH05_VITVI Putative uncharacterized protein OS=Vitis... 69 2e-10
tr|A9NZ92|A9NZ92_PICSI Putative uncharacterized protein OS=Picea... 67 4e-10
tr|B3H6E6|B3H6E6_ARATH Uncharacterized protein At5g20090.3 OS=Ar... 65 2e-09
tr|A9NKM9|A9NKM9_PICSI Putative uncharacterized protein OS=Picea... 62 1e-08
tr|A7PHD8|A7PHD8_VITVI Chromosome chr17 scaffold_16, whole genom... 62 1e-08
tr|A8I311|A8I311_CHLRE Predicted protein OS=Chlamydomonas reinha... 56 1e-06
tr|B6SZP9|B6SZP9_MAIZE Brain protein 44-like protein OS=Zea mays... 55 1e-06
tr|B6TZA8|B6TZA8_MAIZE Brain protein 44-like protein OS=Zea mays... 52 1e-05
tr|A4RQF6|A4RQF6_OSTLU Predicted protein OS=Ostreococcus lucimar... 50 6e-05
tr|A9RVL7|A9RVL7_PHYPA Predicted protein OS=Physcomitrella paten... 47 6e-04
tr|Q01H45|Q01H45_OSTTA Brain protein 44-like (ISS) OS=Ostreococc... 45 0.001
tr|B6KMA0|B6KMA0_TOXGO Apoptosis-regulating basic protein, putat... 44 0.004
tr|B8P8P4|B8P8P4_9APHY Predicted protein OS=Postia placenta Mad-... 42 0.015
tr|Q7SHV4|Q7SHV4_NEUCR Predicted protein OS=Neurospora crassa GN... 42 0.020
tr|Q754Z9|Q754Z9_ASHGO AFL074Cp OS=Ashbya gossypii GN=AFL074C PE... 41 0.034
tr|B5XD37|B5XD37_SALSA Brain protein 44-like protein OS=Salmo sa... 40 0.075
tr|Q4S0Z2|Q4S0Z2_TETNG Chromosome 5 SCAF14773, whole genome shot... 39 0.098
tr|B5XFM9|B5XFM9_SALSA Brain protein 44-like protein OS=Salmo sa... 39 0.098
tr|B5XAF2|B5XAF2_SALSA Brain protein 44-like protein OS=Salmo sa... 39 0.098
tr|B5X6Z2|B5X6Z2_SALSA Brain protein 44-like protein OS=Salmo sa... 39 0.098

>tr|B6UEL2|B6UEL2_MAIZE Brain protein 44-like protein OS=Zea mays
PE=4 SV=1
Length = 107

Score = 73.2 bits (178), Expect = 6e-12
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQLSRWARA GYL K P T +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQLSRWARAQGYLEKKEPETQQ 107


>tr|Q949R9|Q949R9_ARATH Putative uncharacterized protein At5g20090
(Putative uncharacterized protein) OS=Arabidopsis
thaliana GN=At5g20090 PE=2 SV=1
Length = 110

Score = 71.2 bits (173), Expect = 2e-11
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDK 132
MVQPRNYLLL CHA+NETVQLYQLSRWARA GYL K
Sbjct: 66 MVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSK 102


>tr|Q6H4I2|Q6H4I2_ORYSJ Os09g0373000 protein OS=Oryza sativa subsp.
japonica GN=P0599F09.17 PE=4 SV=1
Length = 107

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQ+SRWARA GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQMSRWARAQGYLEKKEPEAQQ 107


>tr|B8BEY3|B8BEY3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31133 PE=4 SV=1
Length = 107

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQ+SRWARA GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQMSRWARAQGYLEKKEPEAQQ 107


>tr|B6T252|B6T252_MAIZE Brain protein 44-like protein OS=Zea mays
PE=4 SV=1
Length = 107

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQLSRWAR+ GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQLSRWARSQGYLDKKEPEAKQ 107


>tr|A3BY81|A3BY81_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_028003 PE=4 SV=1
Length = 101

Score = 70.5 bits (171), Expect = 4e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQ+SRWARA GYL K P +
Sbjct: 59 MVQPRNYLLLACHASNESVQLYQMSRWARAQGYLEKKEPEAQQ 101


>tr|Q6Z565|Q6Z565_ORYSJ Os08g0412500 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0007M04.17 PE=4 SV=1
Length = 107

Score = 70.1 bits (170), Expect = 5e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTP 138
MVQPRNYLLL CHA+NE+VQLYQ SRWARA GYL +K P
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQFSRWARAQGYLENKEP 103


>tr|Q5XLE2|Q5XLE2_MAIZE Brain protein 44-like OS=Zea mays PE=4 SV=1
Length = 107

Score = 70.1 bits (170), Expect = 5e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQLSRWAR+ GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQLSRWARSQGYLEKKEPEAKQ 107


>tr|B6SX80|B6SX80_MAIZE Brain protein 44-like protein OS=Zea mays
PE=4 SV=1
Length = 107

Score = 70.1 bits (170), Expect = 5e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQLSRWAR+ GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQLSRWARSQGYLEKKEPEAKQ 107


>tr|B6TQE5|B6TQE5_MAIZE Brain protein 44-like protein OS=Zea mays
PE=4 SV=1
Length = 107

Score = 68.6 bits (166), Expect = 2e-10
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = +1

Query: 22 MVQPRNYLLLTCHAANETVQLYQLSRWARANGYLGDKTPTTNE 150
MVQPRNYLLL CHA+NE+VQLYQLSRW R+ GYL K P +
Sbjct: 65 MVQPRNYLLLACHASNESVQLYQLSRWVRSQGYLEKKEPEAKQ 107