DK956620 |
Clone id |
TST39A01NGRL0026_D12 |
Library |
TST39 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_D12. 5' end sequence. |
Accession |
DK956620 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL464Contig1 |
Sequence |
GGCGGATCGAGCTTGTGTGCAACGCCTACAGAAGGAATTTCGAGCTCTATGCAAGGAGCC CGTTCCTCATGTAGTTGCCAAACCATCACCAAGCAACATCTTGGAATGGCATTATGTCCT GGAGGGCAGTGAGGGAACCCCTTTTGCAGGTGGTGTGTATCATGGCAAACTCAAATTTCC AGCTGATTATCCCTATAAGCCACCAGGCATCAGCATGCTTACTCCTAATGGTCGCTTTGC CACTCAGAAACGACTTTGCATGTCCATGAGTGACTTTCACCCAGAGACTTGGAATCCGAT GTGGTCAGTCTCAAGCATTCTTACAGGATTGCTATCTTTTATGATGGAGAAGGCTCCCAC AACTGGAAGTGTCTCCAGCACTGACGAGGAGAAGCATCGCTTTGCACAAGCATCACTTGC TTTTAATTGTAAGAGCCCAATTTTTCGCAAAATGTTTCCTGAATATGTAGAGAAGTATAC AGAACTGCTGAAGGCAGCTCAGGCGGAAATTGAGCAAGCTCAACATAGTGAAGTGTTGAA GGCACCACTTCTCGTGGGAAAACCCAATGAAGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SHI7 |
Definition |
sp|Q9SHI7|UBC34_ARATH Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana |
Align length |
168 |
Score (bit) |
283.0 |
E-value |
6.0e-76 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TXY4 |
Definition |
tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
179 |
Score (bit) |
302.0 |
E-value |
8.0e-81 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956620|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_D12, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella paten... 302 8e-81 tr|O65079|O65079_PICMA Probable ubiquitin-conjugating enzyme E2 ... 297 3e-79 tr|B8LNY8|B8LNY8_PICSI Putative uncharacterized protein OS=Picea... 297 3e-79 tr|A9NX37|A9NX37_PICSI Putative uncharacterized protein OS=Picea... 297 3e-79 tr|Q94FU3|Q94FU3_SOLLC Ubiquitin conjugating enzyme 2 OS=Solanum... 284 3e-75 tr|B7FML7|B7FML7_MEDTR Putative uncharacterized protein OS=Medic... 283 6e-75 tr|B4FDP3|B4FDP3_MAIZE Putative uncharacterized protein OS=Zea m... 258 2e-67 tr|Q8VY32|Q8VY32_MAIZE Putative uncharacterized protein OS=Zea m... 256 6e-67 tr|Q69Y56|Q69Y56_ORYSJ Os06g0193000 protein OS=Oryza sativa subs... 256 6e-67 tr|B0ZBJ0|B0ZBJ0_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea may... 256 6e-67 tr|A2YA81|A2YA81_ORYSI Putative uncharacterized protein OS=Oryza... 256 6e-67 tr|A0EVF8|A0EVF8_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea may... 256 6e-67 tr|A8JEV0|A8JEV0_CHLRE Predicted protein (Fragment) OS=Chlamydom... 236 9e-61 tr|Q5GAR9|Q5GAR9_MAIZE Uce2 OS=Zea mays GN=uce2 PE=3 SV=1 233 7e-60 tr|B5YN48|B5YN48_THAPS Predicted protein (Fragment) OS=Thalassio... 211 2e-53 tr|Q7Q6A2|Q7Q6A2_ANOGA AGAP005954-PA OS=Anopheles gambiae GN=AGA... 209 1e-52 tr|Q504T9|Q504T9_HUMAN Ubiquitin-conjugating enzyme E2, J2 (UBC6... 209 1e-52 tr|B1AMF0|B1AMF0_HUMAN Ubiquitin-conjugating enzyme E2, J2 (UBC6... 209 1e-52 tr|Q5U4V7|Q5U4V7_XENLA LOC495424 protein OS=Xenopus laevis GN=ub... 208 1e-52 tr|A9JTQ9|A9JTQ9_XENTR Ube2j2 protein OS=Xenopus tropicalis GN=u... 208 2e-52 tr|A4QNV0|A4QNV0_DANRE Zgc:162164 protein OS=Danio rerio GN=zgc:... 207 4e-52 tr|Q6AYB7|Q6AYB7_RAT Ubiquitin-conjugating enzyme E2, J2 homolog... 206 7e-52 tr|B1ASK9|B1ASK9_MOUSE Ubiquitin-conjugating enzyme E2, J2 homol... 206 7e-52 tr|B1ASK8|B1ASK8_MOUSE Ubiquitin-conjugating enzyme E2, J2 homol... 206 7e-52 tr|B0WPA3|B0WPA3_CULQU Ubiquitin-conjugating enzyme E2 J2 OS=Cul... 205 1e-51 tr|Q28FR3|Q28FR3_XENTR Ubiquitin-conjugating enzyme E2, J2 (UBC6... 205 2e-51 tr|Q9VEJ4|Q9VEJ4_DROME CG5823 OS=Drosophila melanogaster GN=CG58... 203 5e-51 tr|Q16RU3|Q16RU3_AEDAE Ubiquitin-conjugating enzyme E2 j2 OS=Aed... 203 5e-51 tr|B7G226|B7G226_PHATR Predicted protein OS=Phaeodactylum tricor... 202 8e-51 tr|B4PKF0|B4PKF0_DROYA GE25265 OS=Drosophila yakuba GN=GE25265 P... 202 1e-50
>tr|A9TXY4|A9TXY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172602 PE=3 SV=1 Length = 245
Score = 302 bits (774), Expect = 8e-81 Identities = 143/179 (79%), Positives = 159/179 (88%), Gaps = 1/179 (0%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 ADRACVQRLQKEFRALCKEPVPHV+A+PSP++ILEWHYVLEGS+ TPF GGVYHGK+KFP Sbjct: 2 ADRACVQRLQKEFRALCKEPVPHVLARPSPTDILEWHYVLEGSKNTPFEGGVYHGKVKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YPYKPPGISM+TPNGRFATQKR+CMSMSDFHPETWNPMWSVSSILTGLLSFMM+ PT Sbjct: 62 PEYPYKPPGISMITPNGRFATQKRICMSMSDFHPETWNPMWSVSSILTGLLSFMMDNTPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAA-QAEIEQAQHSEV 535 TGSVS++D EK R AQ SLAFNCKS +FRKMFPEYVEK+ E +AA Q EQA + V Sbjct: 122 TGSVSTSDVEKQRLAQNSLAFNCKSVVFRKMFPEYVEKHLERQRAAEQVVAEQANQNGV 180
>tr|O65079|O65079_PICMA Probable ubiquitin-conjugating enzyme E2 OS=Picea mariana GN=Sb55 PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 138/171 (80%), Positives = 154/171 (90%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KFP Sbjct: 2 AETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +PT Sbjct: 62 PEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAAQAEIE 514 TGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E KA E Sbjct: 122 TGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQKAENMNSE 172
>tr|B8LNY8|B8LNY8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 138/171 (80%), Positives = 154/171 (90%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KFP Sbjct: 2 AETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +PT Sbjct: 62 PEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAAQAEIE 514 TGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E KA E Sbjct: 122 TGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQKAENMNSE 172
>tr|A9NX37|A9NX37_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 242
Score = 297 bits (760), Expect = 3e-79 Identities = 138/171 (80%), Positives = 154/171 (90%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A+ ACV+RLQKEFRALCKEPVP+VVA+PSPS+ILEWHYVLEGSEGTPFAGGVYHGK+KFP Sbjct: 2 AETACVKRLQKEFRALCKEPVPNVVARPSPSDILEWHYVLEGSEGTPFAGGVYHGKVKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YPYKPPGISM+TPNGRFAT KR+CMSMSD+HPETWNPMWSVSSILTGLLSFMM+ +PT Sbjct: 62 PEYPYKPPGISMITPNGRFATHKRICMSMSDYHPETWNPMWSVSSILTGLLSFMMDNSPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAAQAEIE 514 TGSVS+T +K R A+ASLAFNCKS IFRKMFPEY EKY+E KA E Sbjct: 122 TGSVSTTVADKQRLAKASLAFNCKSSIFRKMFPEYAEKYSEQQKAENMNSE 172
>tr|Q94FU3|Q94FU3_SOLLC Ubiquitin conjugating enzyme 2 OS=Solanum lycopersicum PE=2 SV=1 Length = 239
Score = 284 bits (726), Expect = 3e-75 Identities = 129/172 (75%), Positives = 154/172 (89%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++ACV+RLQKE+RALCKEPV HVVA+PSP++ILEWHYVLEGSEGTPFAGG Y+GK+KFP Sbjct: 2 AEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YP+KPPGISM TPNGRF TQK++C+SMSDFHPE+WNPMWSVSSILTGLLSFMM+ +PT Sbjct: 62 PEYPFKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAAQAEIEQ 517 TGSVS+T EK + A+ASLAFNCK+P FRK+FPEYVEKY + ++Q EQ Sbjct: 122 TGSVSTTVAEKKKLAKASLAFNCKNPTFRKLFPEYVEKYEQQQLSSQPVPEQ 173
>tr|B7FML7|B7FML7_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 241
Score = 283 bits (723), Expect = 6e-75 Identities = 127/177 (71%), Positives = 154/177 (87%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++AC++RLQKE+RALCKEPV H+VA+PSPS+ILEWHYVLEGSEGTPF+GG Y+GK+KFP Sbjct: 2 AEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 +YPYKPPGISM TPNGRF TQK++C+SMSDFHPE+WNPMWSVSSILTGLLSFMM+ +PT Sbjct: 62 QEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKSPIFRKMFPEYVEKYTELLKAAQAEIEQAQHSE 532 TGSV++T EK R A++S++FNCK+ FRKMFPEYVEKY + + Q EQ SE Sbjct: 122 TGSVNTTTVEKQRLAKSSMSFNCKNATFRKMFPEYVEKYNKQQLSEQVTSEQPASSE 178
>tr|B4FDP3|B4FDP3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 258 bits (659), Expect = 2e-67 Identities = 119/185 (64%), Positives = 145/185 (78%), Gaps = 3/185 (1%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++ C++RLQKE+ ALCKEP P VVA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKFP Sbjct: 2 AEKGCLKRLQKEYHALCKEPPPQVVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A T Sbjct: 62 PDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTELLKAAQAEIEQAQHSE 532 TGS+ ++D EK R A+ASL +NC+S P FRK+FPEYVEKY + L+ E Sbjct: 122 TGSIKTSDAEKRRLAKASLVYNCESKNCPHFRKLFPEYVEKYNQQLQLENTAAEPVPQEN 181
Query: 533 VLKAP 547 AP Sbjct: 182 PAPAP 186
>tr|Q8VY32|Q8VY32_MAIZE Putative uncharacterized protein OS=Zea mays GN=uce2 PE=2 SV=1 Length = 239
Score = 256 bits (654), Expect = 6e-67 Identities = 118/187 (63%), Positives = 145/187 (77%), Gaps = 3/187 (1%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++ C++RLQKE+ ALCKEP P +VA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKFP Sbjct: 2 AEKGCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A T Sbjct: 62 PDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTELLKAAQAEIEQAQHSE 532 TGS+ ++D EK R A+ASLA+NC+S P FRK+FPEYVEKY + + E Sbjct: 122 TGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQQQQLENTAAEPVPQEN 181
Query: 533 VLKAPLL 553 P L Sbjct: 182 PAPVPSL 188
>tr|Q69Y56|Q69Y56_ORYSJ Os06g0193000 protein OS=Oryza sativa subsp. japonica GN=P0698A06.21 PE=2 SV=1 Length = 240
Score = 256 bits (654), Expect = 6e-67 Identities = 119/185 (64%), Positives = 145/185 (78%), Gaps = 3/185 (1%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++ C++RLQKE+ +LCKEP P +VA+P P++ILEWH+VLEGS GTPF GG Y+GKLKFP Sbjct: 2 AEKGCLKRLQKEYHSLCKEPPPQIVARPLPNDILEWHFVLEGSAGTPFEGGYYYGKLKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A T Sbjct: 62 PDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTELLKAAQAEIEQAQHSE 532 TGS+ ST+ EK R A+ASLA+NC+S P FRKMFPEYVEKY + + Q E Sbjct: 122 TGSIRSTEGEKRRLAKASLAYNCESKNCPHFRKMFPEYVEKYNQQKQMEQTVAEPETQEN 181
Query: 533 VLKAP 547 AP Sbjct: 182 PAPAP 186
>tr|B0ZBJ0|B0ZBJ0_MAIZE Ubiquitin conjugating enzyme 2 OS=Zea mays GN=uce2 PE=3 SV=1 Length = 239
Score = 256 bits (654), Expect = 6e-67 Identities = 118/187 (63%), Positives = 145/187 (77%), Gaps = 3/187 (1%) Frame = +2
Query: 2 ADRACVQRLQKEFRALCKEPVPHVVAKPSPSNILEWHYVLEGSEGTPFAGGVYHGKLKFP 181 A++ C++RLQKE+ ALCKEP P +VA+P P++ILEWHYVLEGS+GTPF GG Y+GKLKFP Sbjct: 2 AEKGCLKRLQKEYHALCKEPPPQIVARPLPNDILEWHYVLEGSKGTPFEGGYYYGKLKFP 61
Query: 182 ADYPYKPPGISMLTPNGRFATQKRLCMSMSDFHPETWNPMWSVSSILTGLLSFMMEKAPT 361 DYP+KPP ISM TP+GRFA KR+C+SMSDFHPE+WNPMWSV+SILTGLLSFMM+ A T Sbjct: 62 PDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALT 121
Query: 362 TGSVSSTDEEKHRFAQASLAFNCKS---PIFRKMFPEYVEKYTELLKAAQAEIEQAQHSE 532 TGS+ ++D EK R A+ASLA+NC+S P FRK+FPEYVEKY + + E Sbjct: 122 TGSIKTSDAEKRRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQQQQLENTAAEPVPQEN 181
Query: 533 VLKAPLL 553 P L Sbjct: 182 PAPVPSL 188
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