DK956635 |
Clone id |
TST39A01NGRL0026_E03 |
Library |
TST39 |
Length |
661 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_E03. 5' end sequence. |
Accession |
DK956635 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1634Contig1 |
Sequence |
ATTTGAGTGAACATTTGGGGCGATCTAAATGGCTTATGTTGATCGAACCTTCTCTATCAC GGAGGATGATTTTGAGGGCACCTTCATCGTGCACAATCGGCCACCTGTGAAGGAAATTGC GCTCGCGATCGCTCTCCTCGCATTTGGTATATTGGGAATTCTGTTTGGCTTCATCATGAT GTTCAATAAGGTTGGAGGCGACCGTGGTCATGGGTTGTCTTTTGCCATCCTCGGAGCAGT TCTTTTTCTACCGGGATTTTATTACACGCGGATTGCATACTATGCTTATAAGGGCTACAA GGGATTCTCATTTGCAAATATACCAGCAGTGTGACCAATGGCAACCAGACCAGATGTGAG TGCGGAGTTGCAGGTAGACAAAAACACACGGTAGAGAGCTCTTACATGACCCAAAAGAGC AATGTTGTAATATGTGTTGTATAGGATTGCGGTGTGTTTCTCTCGGCGCCATGGCATGAA CCATGGAGTTTGCACATGTAATTTACCAAGACCTCTCTAAGAGTGAATGTGGTGGGGAAG TGAGAAAGGAGTGTGCAAGACATTGTAGCTTGATTACGATGCCGTTGCAATGTAATTACT CTCACGGGTACTGATGTAATACTATGGGACTTCTCTGGGAAAAAAAAAAAAAAAAAAAAA A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R8X3 |
Definition |
sp|Q5R8X3|CT030_PONAB UPF0414 transmembrane protein C20orf30 homolog OS=Pongo abelii |
Align length |
47 |
Score (bit) |
55.1 |
E-value |
3.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NYT5 |
Definition |
tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
101 |
Score (bit) |
135.0 |
E-value |
3.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956635|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_E03, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea... 135 3e-30 tr|A9SRL6|A9SRL6_PHYPA Predicted protein OS=Physcomitrella paten... 129 1e-28 tr|A5CB04|A5CB04_VITVI Putative uncharacterized protein OS=Vitis... 129 1e-28 tr|Q207T6|Q207T6_9ASPA Putative uncharacterized protein OS=Gymna... 129 2e-28 tr|Q9SZQ6|Q9SZQ6_ARATH Putative uncharacterized protein F27B13.9... 122 1e-26 tr|O64568|O64568_ARATH Expressed protein (Putative uncharacteriz... 119 2e-25 tr|A9PGK0|A9PGK0_POPTR Putative uncharacterized protein OS=Popul... 118 3e-25 tr|A9PER7|A9PER7_POPTR Putative uncharacterized protein OS=Popul... 118 3e-25 tr|B7FME0|B7FME0_MEDTR Putative uncharacterized protein OS=Medic... 113 8e-24 tr|Q6ETP4|Q6ETP4_ORYSJ Os02g0176400 protein OS=Oryza sativa subs... 103 9e-21 tr|A2X1I9|A2X1I9_ORYSI Putative uncharacterized protein OS=Oryza... 103 9e-21 tr|B6TQQ7|B6TQQ7_MAIZE Putative uncharacterized protein OS=Zea m... 102 1e-20 tr|A9T257|A9T257_PHYPA Predicted protein (Fragment) OS=Physcomit... 64 1e-08 tr|A7SGM3|A7SGM3_NEMVE Predicted protein OS=Nematostella vectens... 57 7e-07 tr|A9RNL1|A9RNL1_PHYPA Predicted protein (Fragment) OS=Physcomit... 57 1e-06 tr|A7PN07|A7PN07_VITVI Chromosome chr14 scaffold_21, whole genom... 57 1e-06 tr|A9PDG2|A9PDG2_POPTR Putative uncharacterized protein OS=Popul... 56 2e-06 tr|B3S393|B3S393_TRIAD Putative uncharacterized protein OS=Trich... 56 2e-06 tr|Q9LVP2|Q9LVP2_ARATH Emb|CAB43660.1 (At3g29170) (Putative unch... 55 3e-06 tr|B5FZ43|B5FZ43_TAEGU Putative uncharacterized protein OS=Taeni... 55 5e-06 tr|A2AMQ1|A2AMQ1_MOUSE Orthologue of H. sapiens chromosome 20 op... 55 5e-06 tr|A9SHT6|A9SHT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 55 5e-06 tr|B2RDM8|B2RDM8_HUMAN Chromosome 20 open reading frame 30, isof... 55 5e-06 tr|A7E2V0|A7E2V0_DANRE Zgc:162251 protein OS=Danio rerio GN=zgc:... 54 6e-06 tr|Q68EX6|Q68EX6_XENLA MGC84111 protein OS=Xenopus laevis GN=MGC... 54 8e-06 tr|Q6GM26|Q6GM26_XENLA MGC84021 protein OS=Xenopus laevis GN=MGC... 54 1e-05 tr|Q6DET5|Q6DET5_XENTR MGC89669 protein OS=Xenopus tropicalis GN... 54 1e-05 tr|Q28C04|Q28C04_XENTR Novel protein OS=Xenopus tropicalis GN=TE... 54 1e-05 tr|Q68EJ3|Q68EJ3_DANRE Novel protein (Zgc:101123) OS=Danio rerio... 53 1e-05 tr|B5X9I3|B5X9I3_SALSA UPF0414 transmembrane protein C20orf30 ho... 53 2e-05
>tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 101
Score = 135 bits (339), Expect = 3e-30 Identities = 62/101 (61%), Positives = 72/101 (71%) Frame = +2
Query: 29 MAYVDRTFSITEDDFEGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGDRG 208 MAYVD FSITEDD G++ VHN PP+KE MM+NK+GGDRG Sbjct: 1 MAYVDHAFSITEDDSAGSYAVHNSPPIKEISLAVALLVFGTVGIVVGFIMMYNKIGGDRG 60
Query: 209 HGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 HG+ FAILG +LF+PGFYYTR+AYYAYKGYKGFSF+NIP V Sbjct: 61 HGIFFAILGGMLFIPGFYYTRLAYYAYKGYKGFSFSNIPPV 101
>tr|A9SRL6|A9SRL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_230563 PE=4 SV=1 Length = 101
Score = 129 bits (325), Expect = 1e-28 Identities = 65/101 (64%), Positives = 70/101 (69%) Frame = +2
Query: 29 MAYVDRTFSITEDDFEGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGDRG 208 MAYVD TFSI +D GTFIVHN PPVKE M KVGGD G Sbjct: 1 MAYVDHTFSIRDDVSGGTFIVHNGPPVKEIALAVTLLALGTLGIIFGVFMAAYKVGGDTG 60
Query: 209 HGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 HG++FAILG +LFLPGFYYTRIAYYAYKGYKGFSF+NIPAV Sbjct: 61 HGIAFAILGTLLFLPGFYYTRIAYYAYKGYKGFSFSNIPAV 101
>tr|A5CB04|A5CB04_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030526 PE=4 SV=1 Length = 103
Score = 129 bits (324), Expect = 1e-28 Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSI+++D E ++IVHNRPP+KE M++N+VGGD Sbjct: 1 MAYVDHAFSISDEDIMMETSYIVHNRPPIKEIALAVALLVFGTLGIILGILMVYNRVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 R HGL FAILGA+LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 RAHGLFFAILGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|Q207T6|Q207T6_9ASPA Putative uncharacterized protein OS=Gymnadenia conopsea PE=4 SV=1 Length = 103
Score = 129 bits (323), Expect = 2e-28 Identities = 63/103 (61%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSI+++D E +++VHNRPPVKE M +N+ GGD Sbjct: 1 MAYVDHAFSISDEDIMMESSYVVHNRPPVKEIALAVALLVFGVLGIVLGIVMTYNRAGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 R HG+ FAILGAVLFLPGFYYTRIAYYAYKGY GFSFANIPAV Sbjct: 61 RAHGIFFAILGAVLFLPGFYYTRIAYYAYKGYTGFSFANIPAV 103
>tr|Q9SZQ6|Q9SZQ6_ARATH Putative uncharacterized protein F27B13.90 (At4g29850) (Putative uncharacterized protein AT4g29850) OS=Arabidopsis thaliana GN=AT4g29850 PE=4 SV=1 Length = 103
Score = 122 bits (307), Expect = 1e-26 Identities = 59/103 (57%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSIT++D E ++ V+NRPPVKE M +N+VGGD Sbjct: 1 MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 RGHG+ F +LG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|O64568|O64568_ARATH Expressed protein (Putative uncharacterized protein At2g19350) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g19350 PE=2 SV=1 Length = 103
Score = 119 bits (297), Expect = 2e-25 Identities = 59/103 (57%), Positives = 71/103 (68%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDFE-GT-FIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSI+++D GT + V NRPPVKE M +N+VGGD Sbjct: 1 MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 RGHG+ F +LG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP+V Sbjct: 61 RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103
>tr|A9PGK0|A9PGK0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 103
Score = 118 bits (296), Expect = 3e-25 Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSIT++D E ++ V+N+PP+KE M +N VGGD Sbjct: 1 MAYVDHAFSITDEDLMLETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 R HGL FAILG VLF+PGFYYTRIAY+AYKGY GFSF+NIP V Sbjct: 61 RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103
>tr|A9PER7|A9PER7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 103
Score = 118 bits (296), Expect = 3e-25 Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDF--EGTFIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSIT++D E ++ V+N+PP+KE M +N VGGD Sbjct: 1 MAYVDHAFSITDEDLMVETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 R HGL FAILG VLF+PGFYYTRIAY+AYKGY GFSF+NIP V Sbjct: 61 RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103
>tr|B7FME0|B7FME0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 103
Score = 113 bits (283), Expect = 8e-24 Identities = 59/103 (57%), Positives = 69/103 (66%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSITEDDFE-GT-FIVHNRPPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSI+++D GT + V+N+PPVKE M +N VGGD Sbjct: 1 MAYVDHAFSISDEDIMIGTSYTVNNKPPVKEIALAVSLLVFGFLSIIIGSLMAYNHVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 HGL FAILG +LF+PGFYYTRIAYYAYKGYKGFSF+NIP V Sbjct: 61 TVHGLFFAILGMLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
>tr|Q6ETP4|Q6ETP4_ORYSJ Os02g0176400 protein OS=Oryza sativa subsp. japonica GN=P0504A05.1 PE=4 SV=1 Length = 103
Score = 103 bits (257), Expect = 9e-21 Identities = 56/103 (54%), Positives = 63/103 (61%), Gaps = 2/103 (1%) Frame = +2
Query: 29 MAYVDRTFSIT-EDDFEGTFIVHNR-PPVKEXXXXXXXXXXXXXXXXXXXXMMFNKVGGD 202 MAYVD FSI+ EDD G + R PVKE M N VGGD Sbjct: 1 MAYVDHAFSISDEDDLVGGAVGGPRGAPVKEIAFAAALLAFGALGAIGGVLMAANNVGGD 60
Query: 203 RGHGLSFAILGAVLFLPGFYYTRIAYYAYKGYKGFSFANIPAV 331 R HG+ F ILG V+F+PGFYYTRIAYYAYKGYKGFSF+NIP + Sbjct: 61 RAHGIFFMILGIVMFIPGFYYTRIAYYAYKGYKGFSFSNIPPI 103
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