DK956638 |
Clone id |
TST39A01NGRL0026_E06 |
Library |
TST39 |
Length |
448 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_E06. 5' end sequence. |
Accession |
DK956638 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
AAAATGGTGAAGTTTACAACTGAAGAGCTGCGTAGGATCATGGACAAGAAGAACAACATT AGGAATATGTCTGTTATCGCCCATGTGGATCATGGGAAATCTACCTTAACAGACTCTCTT GTGGCTGCTGCTGGTATCATTGCTCAAGAGGTCGCTGGAGATGTGCGCCTGACAGACACC CGTCAAGATGAGGCTGAACGTGGCATTACCATCAAATCTACTGGGATCTCCCTGTACTAT GAAATGTCTGAAAAATCTTTGAAAGATTACAAGGGTGAGAAGGATGGGAATGACTACTTG ATTAATCTAATTGATTCTCCGGGCCATGTCGACTTTTCTTCGGAGGTTACTGCAGCTTTG CGCATCACAGAATGGTGCCTTGGTGGTGGTAGATTGTGTGGAGGGTGTCTGTGTGCAGAC TGAAACTGTCCTTCGACAGGGCTCTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
123 |
Score (bit) |
212.0 |
E-value |
7.0e-55 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XTK1 |
Definition |
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica |
Align length |
123 |
Score (bit) |
223.0 |
E-value |
3.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956638|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_E06, 5' (448 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 223 3e-57 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 223 3e-57 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 223 3e-57 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 223 3e-57 tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 223 4e-57 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 223 4e-57 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 223 5e-57 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 220 3e-56 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 219 4e-56 tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 218 9e-56 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 218 9e-56 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 213 3e-54 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 211 1e-53 tr|A2ZXD6|A2ZXD6_ORYSJ Putative uncharacterized protein OS=Oryza... 209 4e-53 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 207 2e-52 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 207 2e-52 tr|A2WUL5|A2WUL5_ORYSI Putative uncharacterized protein OS=Oryza... 207 2e-52 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 201 2e-50 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 182 1e-44 tr|A9V921|A9V921_MONBE Predicted protein OS=Monosiga brevicollis... 177 2e-43 tr|A7PWR7|A7PWR7_VITVI Chromosome chr19 scaffold_35, whole genom... 177 2e-43 tr|B5VGR2|B5VGR2_YEAS6 YDR385Wp-like protein OS=Saccharomyces ce... 176 4e-43 tr|B3LFR5|B3LFR5_YEAS1 Translation elongation factor 2 OS=Saccha... 176 4e-43 tr|A6ZNY0|A6ZNY0_YEAS7 Translation elongation factor 2 (EF-2) OS... 176 4e-43 tr|Q52MA1|Q52MA1_XENLA Putative uncharacterized protein OS=Xenop... 176 4e-43 tr|Q8C153|Q8C153_MOUSE Putative uncharacterized protein OS=Mus m... 176 4e-43 tr|Q8BMA8|Q8BMA8_MOUSE Putative uncharacterized protein OS=Mus m... 176 4e-43 tr|Q60423|Q60423_CRIGR Elongation factor 2 OS=Cricetulus griseus... 176 4e-43 tr|Q3UZ14|Q3UZ14_MOUSE Putative uncharacterized protein OS=Mus m... 176 4e-43 tr|Q3UDC8|Q3UDC8_MOUSE Putative uncharacterized protein OS=Mus m... 176 4e-43
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 223 bits (569), Expect = 3e-57 Identities = 113/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 223 bits (569), Expect = 3e-57 Identities = 113/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 223 bits (569), Expect = 3e-57 Identities = 113/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 223 bits (569), Expect = 3e-57 Identities = 113/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217194 PE=4 SV=1 Length = 451
Score = 223 bits (568), Expect = 4e-57 Identities = 112/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 223 bits (568), Expect = 4e-57 Identities = 112/123 (91%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 223 bits (567), Expect = 5e-57 Identities = 112/123 (91%), Positives = 119/123 (96%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTAEELRAIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISLYYEM+++SLK+YKGE+DGN YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKNYKGERDGNQYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.16 PE=2 SV=1 Length = 826
Score = 220 bits (560), Expect = 3e-56 Identities = 108/123 (87%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03688 PE=4 SV=1 Length = 826
Score = 219 bits (559), Expect = 4e-56 Identities = 108/123 (87%), Positives = 120/123 (97%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
>tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228450 PE=4 SV=1 Length = 545
Score = 218 bits (556), Expect = 9e-56 Identities = 111/123 (90%), Positives = 117/123 (95%) Frame = +1
Query: 4 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 183 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 184 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 363 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 364 ITE 372 IT+ Sbjct: 121 ITD 123
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