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NBDC - LSDB Archive
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DK956662
Clone id TST39A01NGRL0026_F06
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_F06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTG
AGTAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGG
GTGGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGC
ATCTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCT
TACCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGAC
CCCGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTG
GGCGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAG
GCAGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGC
AACCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTG
ATGGGCGCTGTTGAGGGTTACAGAGTTGGCGG
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 166
Score (bit) 315.0
E-value 1.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956662|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_F06, 5'
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   315   1e-85
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   301   2e-81
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   298   2e-80
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   295   8e-80
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   295   1e-79
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   293   3e-79
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   293   5e-79
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   289   8e-78
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   286   5e-77
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   286   5e-77
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   285   1e-76
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   282   1e-75
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   273   6e-73
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   266   5e-71
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   265   9e-71
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   263   5e-70
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   263   5e-70
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   262   8e-70
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   262   1e-69
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   262   1e-69
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   261   2e-69
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   259   5e-69
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   259   5e-69
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   259   5e-69
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   259   5e-69
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   259   7e-69
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   259   7e-69
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   259   7e-69
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   259   9e-69
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   258   1e-68

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  315 bits (807), Expect = 1e-85
 Identities = 150/166 (90%), Positives = 155/166 (93%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQT LKPQNEL ++VG    RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVG 176


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  301 bits (770), Expect = 2e-81
 Identities = 140/166 (84%), Positives = 154/166 (92%), Gaps = 1/166 (0%)
 Frame = +1

Query: 76  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73  EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVG 178


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  298 bits (762), Expect = 2e-80
 Identities = 143/167 (85%), Positives = 152/167 (91%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK  NEL  ++G V   RVSMRRTVKS P SIWYGPDRPKYLGPFS+  PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVG
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVG 177


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  295 bits (756), Expect = 8e-80
 Identities = 140/167 (83%), Positives = 151/167 (90%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           F GQ   K QNE  ++VGN  E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVG
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVG 177


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  295 bits (755), Expect = 1e-79
 Identities = 138/167 (82%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVG
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVG 177


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  293 bits (751), Expect = 3e-79
 Identities = 137/166 (82%), Positives = 154/166 (92%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQTALK ++EL ++VG  + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVG 176


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  293 bits (749), Expect = 5e-79
 Identities = 139/167 (83%), Positives = 152/167 (91%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVG
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVG 177


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  289 bits (739), Expect = 8e-78
 Identities = 138/167 (82%), Positives = 149/167 (89%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           F G+T L+  NE  ++ GN  +AR +MRRTVKS PESIWYGPDRPKYLGPFSE  PSYLT
Sbjct: 11  FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVG
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVG 177


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  286 bits (732), Expect = 5e-77
 Identities = 133/157 (84%), Positives = 148/157 (94%)
 Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVG
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVG 175



 Score = 30.8 bits (68), Expect = 5.0
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
              G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  286 bits (732), Expect = 5e-77
 Identities = 133/157 (84%), Positives = 148/157 (94%)
 Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVG
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVG 175



 Score = 30.8 bits (68), Expect = 5.0
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
              G
Sbjct: 232 TGKG 235
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 166
Score (bit) 306.0
E-value 5.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956662|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_F06, 5'
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   306   5e-82
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   305   9e-82
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   305   2e-81
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   304   2e-81
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   303   3e-81
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   303   3e-81
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   303   6e-81
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   302   8e-81
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   300   3e-80
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   300   5e-80
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   300   5e-80
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   300   5e-80
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   300   5e-80
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   299   6e-80
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   298   1e-79
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   298   1e-79
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   298   1e-79
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   298   1e-79
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   297   2e-79
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   297   2e-79
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   297   2e-79
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   297   3e-79
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   296   5e-79
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   295   9e-79
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   295   1e-78
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   295   1e-78
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   294   2e-78
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   293   5e-78
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   293   6e-78
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   292   8e-78

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  306 bits (784), Expect = 5e-82
 Identities = 143/166 (86%), Positives = 156/166 (93%), Gaps = 1/166 (0%)
 Frame = +1

Query: 76  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVG 178


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  305 bits (782), Expect = 9e-82
 Identities = 144/166 (86%), Positives = 153/166 (92%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQTALK QNEL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVG 176


>tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex
           palustris GN=CAB1 PE=2 SV=1
          Length = 264

 Score =  305 bits (780), Expect = 2e-81
 Identities = 144/165 (87%), Positives = 154/165 (93%)
 Frame = +1

Query: 76  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 255
           AGQTALKPQNEL ++VG    R  MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGQTALKPQNELVRKVGGNGGRFFMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 435
           FPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PELL+KNGV+FGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSKNGVQFGEAVWFK 131

Query: 436 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           AGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVG
Sbjct: 132 AGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVG 176


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  304 bits (779), Expect = 2e-81
 Identities = 142/165 (86%), Positives = 154/165 (93%)
 Frame = +1

Query: 76  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 255
           AG+TALK QNEL K+VG    R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 435
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 436 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVG 176


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  303 bits (777), Expect = 3e-81
 Identities = 143/167 (85%), Positives = 158/167 (94%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKPQNEL +++G++   R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVG
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVG 177


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  303 bits (777), Expect = 3e-81
 Identities = 144/167 (86%), Positives = 156/167 (93%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK  NEL ++VG +   R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVG
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVG 177


>tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta
           vulgaris subsp. vulgaris PE=2 SV=1
          Length = 264

 Score =  303 bits (775), Expect = 6e-81
 Identities = 142/166 (85%), Positives = 152/166 (91%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQT LKPQNEL ++ G    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTILKPQNELVRKFGGNGGRASMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVG 176


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  302 bits (774), Expect = 8e-81
 Identities = 141/166 (84%), Positives = 152/166 (91%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           F GQT LK QNEL ++VG    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVG 176


>tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesting
           chlorophyll a/b-binding protein) OS=Arabidopsis thaliana
           GN=Lhcb2:4 PE=2 SV=1
          Length = 266

 Score =  300 bits (769), Expect = 3e-80
 Identities = 139/168 (82%), Positives = 155/168 (92%), Gaps = 2/168 (1%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG--NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYL 246
           FAGQT LKP N+L +++G  N   R+ MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYL
Sbjct: 11  FAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYL 70

Query: 247 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 426
           TGE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAV
Sbjct: 71  TGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAV 130

Query: 427 WFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           WFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+G
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIG 178


>tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana
           GN=Lhcb2.3 PE=2 SV=1
          Length = 265

 Score =  300 bits (767), Expect = 5e-80
 Identities = 141/167 (84%), Positives = 156/167 (93%), Gaps = 1/167 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVG 570
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+G
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIG 177