DK956663 |
Clone id |
TST39A01NGRL0026_F07 |
Library |
TST39 |
Length |
753 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_F07. 5' end sequence. |
Accession |
DK956663 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL955Contig1 |
Sequence |
GGCGGGCGGAAGAATGGCAGCCCGGACGTTGAGTAATCTCACCACGGCCTTTCGGCTGTC GCCCTCTCGCGTTTGCTCTTCTTCTGCACCCTCAACGTCCTCAACCACGTCTCGCCTTGT CTCGGAAAGGATCGTGGAGCTCACTGCCATAGATGTGGATGGCATCAGGCATAATGTGAA GGGTTTGACAGACCACACCCTCTTGAGGGCGCTCATGAATCATCGCCTGATTGATCCAGA ATCACACAGGCTGGATGACATCAATGCTTGCACTGCAGAATGCCGTGTAATGGTGGCGAC GGAGTGGCTGGAGAAGCTACCTCCTAGGTCTGAAGATGAGTACGACACGCTTGTTGCTGC TGCCTCACACAGAAAAGTTATACCACAGGACCGCCTCGGTTGCCAGATCGTCCTGAACAC TGATCTGCGAGGTATGGTTGTTGCTGTCCCTGAACCCAAGCCCTGGCGAATTCCATGACT TCTGGTTTGTATCTGCTCACGGATGTTTCTTGAATGCGCATTAAAAATTGTAGTCAAGAG TGCATTCACTCCTTTCAATCGAACAGGAAAAATAATTTATGGCCTCTGTATTGAGGCCCA ACAATTTCCCAATGGAGGTCATCATGACAAGTAGGTTAGTGTCTATCCCAGTACCAATTT TGGGAATATCAATTGCTTACGTTGAAGGGTGTTTTTCTTTTGTAAAAATCCATTTTTTTT TGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37193 |
Definition |
sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster |
Align length |
116 |
Score (bit) |
51.6 |
E-value |
4.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956663|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_F07, 5' (725 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=... 52 4e-06 sp|Q5FWQ0|ADXL_XENLA Adrenodoxin-like protein, mitochondrial OS=... 49 3e-05 sp|P43493|THCC_RHOER Rhodocoxin OS=Rhodococcus erythropolis GN=t... 47 8e-05 sp|Q9CPW2|ADXL_MOUSE Adrenodoxin-like protein, mitochondrial OS=... 45 4e-04 sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=... 45 5e-04 sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=... 44 0.001 sp|Q12184|ADRX_YEAST Adrenodoxin homolog, mitochondrial OS=Sacch... 43 0.002 sp|Q08C57|ADXL_DANRE Adrenodoxin-like protein, mitochondrial OS=... 42 0.003 sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial ... 42 0.004 sp|P00259|PUTX_PSEPU Putidaredoxin OS=Pseudomonas putida GN=camB... 41 0.006 sp|Q9AKC4|FER2_RICTY 2Fe-2S ferredoxin OS=Rickettsia typhi GN=fd... 40 0.017 sp|P13216|ADX_CHICK Adrenodoxin, mitochondrial (Fragment) OS=Gal... 39 0.022 sp|Q9ZDW6|FER2_RICPR 2Fe-2S ferredoxin OS=Rickettsia prowazekii ... 39 0.029 sp|P37098|FER2_CAUCR 2Fe-2S ferredoxin OS=Caulobacter crescentus... 39 0.029 sp|P10109|ADX_HUMAN Adrenodoxin, mitochondrial OS=Homo sapiens G... 39 0.037 sp|Q92J08|FER2_RICCN 2Fe-2S ferredoxin OS=Rickettsia conorii GN=... 38 0.049 sp|P29330|ADX_SHEEP Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2 38 0.064 sp|P80306|FER6_RHOCA Ferredoxin-6 OS=Rhodobacter capsulatus PE=1... 37 0.083 sp|Q9AKM6|FER2_RICMO 2Fe-2S ferredoxin OS=Rickettsia montana GN=... 37 0.083 sp|Q4UKL2|FER2_RICFE 2Fe-2S ferredoxin OS=Rickettsia felis GN=fd... 37 0.083 sp|P33007|TERPB_PSESP Terpredoxin OS=Pseudomonas sp. GN=terPB PE... 37 0.11 sp|Q9AKH1|FER2_RICRI 2Fe-2S ferredoxin OS=Rickettsia rickettsii ... 37 0.11 sp|Q1RJ69|FER2_RICBR 2Fe-2S ferredoxin OS=Rickettsia bellii (str... 37 0.11 sp|P00258|ADX_PIG Adrenodoxin, mitochondrial OS=Sus scrofa GN=FD... 37 0.14 sp|P00257|ADX_BOVIN Adrenodoxin, mitochondrial OS=Bos taurus GN=... 37 0.14 sp|P24483|ADX_RAT Adrenodoxin, mitochondrial OS=Rattus norvegicu... 35 0.41 sp|P46656|ADX_MOUSE Adrenodoxin, mitochondrial OS=Mus musculus G... 35 0.41 sp|Q8PWV6|SYFA_METMA Phenylalanyl-tRNA synthetase alpha chain OS... 32 2.7
>sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster GN=Fdxh PE=2 SV=3 Length = 172
Score = 51.6 bits (122), Expect = 4e-06 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Frame = +2
Query: 122 SERIVELTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDINACTAE-----CR 286 ++ IV +T +D DG R V+G +L + HR H ++ AC A C Sbjct: 53 TDEIVNITYVDKDGKRTKVQGKVGDNVL--YLAHR------HGIEMEGACEASLACTTCH 104
Query: 287 VMVATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 V V ++L+KL E E D L A R+ RLGCQI+L+ + GM + +P+ Sbjct: 105 VYVQHDYLQKLKEAEEQEDDLLDMAPFLRE---NSRLGCQILLDKSMEGMELELPK 157
>sp|Q5FWQ0|ADXL_XENLA Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l PE=2 SV=1 Length = 193
Score = 48.9 bits (115), Expect = 3e-05 Identities = 38/112 (33%), Positives = 52/112 (46%) Frame = +2
Query: 119 VSERIVELTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDINACTAECRVMVA 298 +SE VE+ +D G R VKG ++L + HR + AC+ C V V Sbjct: 73 LSEETVEVVFLDRSGQRIPVKGKVGESVL--CLAHRYNIELEGACESSLACST-CHVYVN 129
Query: 299 TEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 TE+ KLP E E D L A ++ RLGCQI+L L G +P+ Sbjct: 130 TEYFHKLPEPDEREDDMLDMAPLLQE---NSRLGCQIILTKQLNGAEFTLPK 178
>sp|P43493|THCC_RHOER Rhodocoxin OS=Rhodococcus erythropolis GN=thcC PE=1 SV=2 Length = 107
Score = 47.4 bits (111), Expect = 8e-05 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%) Frame = +2
Query: 140 LTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDI------NACTAECRVMVAT 301 +T + DG +H V+ T +++A + + D I A A C V V + Sbjct: 4 VTYVHPDGTKHEVEVPTGKRVMQAAIGAGI--------DGIVAECGGQAMCATCHVYVES 55
Query: 302 EWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 W +K P SE+E + L S R RL CQ+V++ D+ G++V +PE Sbjct: 56 PWADKFPSISEEEDEMLDDTVSPRT--EASRLSCQLVVSDDVDGLIVRLPE 104
>sp|Q9CPW2|ADXL_MOUSE Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l PE=2 SV=1 Length = 174
Score = 45.1 bits (105), Expect = 4e-04 Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 6/114 (5%) Frame = +2
Query: 131 IVELTAIDVDGIRHNVKG-LTDHTLLRALMNHRLIDPESHRLDDINACTAE-----CRVM 292 +V + +D G R V+G + D+ L A + H +D AC A C V Sbjct: 58 VVNVVFVDRSGKRIPVRGKVGDNVLYLA---------QRHGVDLEGACEASLACSTCHVY 108
Query: 293 VATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 V+ L+ LPP E E D L A ++ RLGCQIVL +L G+ A+P+ Sbjct: 109 VSEAHLDLLPPPEEREDDMLDMAPLLQE---NSRLGCQIVLTPELEGVEFALPK 159
>sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2 SV=1 Length = 186
Score = 44.7 bits (104), Expect = 5e-04 Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Frame = +2
Query: 131 IVELTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDINACTAE-----CRVMV 295 +V + +D G R V G +L + H LD AC A C V V Sbjct: 70 VVNVVFVDRSGQRIPVSGRVGDNVLHLA--------QRHGLDLEGACEASLACSTCHVYV 121
Query: 296 ATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 + + L+ LPP E E D L A ++ RLGCQIVL +L G +P+ Sbjct: 122 SEDHLDLLPPPDEREDDMLDMAPLLQE---NSRLGCQIVLTPELEGAEFTLPK 171
>sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L PE=2 SV=1 Length = 183
Score = 43.5 bits (101), Expect = 0.001 Identities = 33/108 (30%), Positives = 49/108 (45%) Frame = +2
Query: 131 IVELTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDINACTAECRVMVATEWL 310 +V + +D G R V G +L H +D E + + + C V V+ + L Sbjct: 67 VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHG-VDLEG--ACEASLACSTCHVYVSEDHL 123
Query: 311 EKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 + LPP E E D L A ++ RLGCQIVL +L G +P+ Sbjct: 124 DLLPPPEEREDDMLDMAPLLQE---NSRLGCQIVLTPELEGAEFTLPK 168
>sp|Q12184|ADRX_YEAST Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae GN=YAH1 PE=1 SV=1 Length = 172
Score = 43.1 bits (100), Expect = 0.002 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Frame = +2
Query: 239 ESHRLDDINAC-----TAECRVMVATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGC 403 + H LD AC + C V+V ++ + LP +DE D L A + RLGC Sbjct: 88 QGHNLDMEGACGGSCACSTCHVIVDPDYYDALPEPEDDENDMLDLAYG---LTETSRLGC 144
Query: 404 QIVLNTDLRGMVVAVPE 454 QI ++ D+ G+ VA+P+ Sbjct: 145 QIKMSKDIDGIRVALPQ 161
>sp|Q08C57|ADXL_DANRE Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l PE=2 SV=1 Length = 195
Score = 42.0 bits (97), Expect = 0.003 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Frame = +2
Query: 125 ERIVELTAIDVDGIRHNVKGLTDHTLLRALMNHRLIDPESHRLDDINACTAE-----CRV 289 E IV + ID G R V+ +L + H+ H +D AC A C V Sbjct: 77 EHIVNVVYIDRSGRRIPVQARVGDNVL--YLAHK------HGIDLEGACEASLACSTCHV 128
Query: 290 MVATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVAVPE 454 V++ ++LP E E D L A ++ RLGCQI+L +L GM + +P+ Sbjct: 129 YVSSGHYDRLPEPEEREDDMLDMAPLLQE---NSRLGCQIILTPELDGMELTLPK 180
>sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces pombe GN=etp1 PE=2 SV=1 Length = 631
Score = 41.6 bits (96), Expect = 0.004 Identities = 26/62 (41%), Positives = 33/62 (53%) Frame = +2
Query: 266 ACTAECRVMVATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVVA 445 AC+ C V+V E E L P EDE D L A + RLGCQ++L DL G+ V Sbjct: 561 ACST-CHVIVDPEHYELLDPPEEDEEDMLDLAFGLEET---SRLGCQVLLRKDLDGIRVR 616
Query: 446 VP 451 +P Sbjct: 617 IP 618
>sp|P00259|PUTX_PSEPU Putidaredoxin OS=Pseudomonas putida GN=camB PE=1 SV=3 Length = 107
Score = 41.2 bits (95), Expect = 0.006 Identities = 23/64 (35%), Positives = 34/64 (53%) Frame = +2
Query: 263 NACTAECRVMVATEWLEKLPPRSEDEYDTLVAAASHRKVIPQDRLGCQIVLNTDLRGMVV 442 +A A C V V + +K+P +E E L + K P RL CQI++ +L G+VV Sbjct: 43 SASCATCHVYVNEAFTDKVPAANEREIGMLECVTAELK--PNSRLCCQIIMTPELDGIVV 100
Query: 443 AVPE 454 VP+ Sbjct: 101 DVPD 104
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U341 |
Definition |
tr|A9U341|A9U341_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
116 |
Score (bit) |
148.0 |
E-value |
4.0e-34 |
Report |
|