DK956685 |
Clone id |
TST39A01NGRL0026_G05 |
Library |
TST39 |
Length |
624 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_G05. 5' end sequence. |
Accession |
DK956685 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL885Contig1 |
Sequence |
CATAAACTGAAAGACTCTTCTTCTCTCCTCCCCTATCTTCTCTCACATACACAAGCATCT CGTGCCCAAGAGTGTGGAAGCCCCGTTATATGCTATCTTTATCAAAGAATTTAGCACGCA GAATTGCTCTCCGGCGCTCTGTAAGCTCGCCATCAAAGCAGCAGGAAGAAAGAAGCTTGC CTGCAAAAGATACAGAAAGCTGGTGGAAGGTTGGTTCCATGGCAGGCTCAGGCGCATTTG AAGAAATTGTCGATAAGGACGTCTTCAAGTATTATGCAGATGGGGAGTGGAGGGTCTCTG CATCCGGCAAATCAGTGACCATCACGAATCCCTCCACACGCCAGCCTCAGTACAAAGTGC AAGCTTGCACTCAAGAGGAGGTCAACAAAGCACTTGAAAGTGCTAAAGCAGCGCAAAAGC TGTGGGCAAAAGTACCTTTGTGGAAGAGAGCAGAGGCCTTACATAAGGCTGCAGCAATCT TAAAGCAGCATAAAGATCCTATTGCGAAATGCCTTGTGAAAGAGATTGCGAAACCTGCCA AAGATGCAGTATCAGAGGTGGTTCGTTCTGGCGATCTTATCTCATATTGTGCTGAGGAAG GAGTAAGAATTTTGTCGGAGGGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43272 |
Definition |
sp|Q43272|GAPN_MAIZE NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays |
Align length |
136 |
Score (bit) |
220.0 |
E-value |
4.0e-57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5X2 |
Definition |
tr|A7P5X2|A7P5X2_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
135 |
Score (bit) |
222.0 |
E-value |
1.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956685|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_G05, 5' (624 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5X2|A7P5X2_VITVI Chromosome chr4 scaffold_6, whole genome ... 222 1e-56 tr|B4FR32|B4FR32_MAIZE NADP-dependent glyceraldehyde-3-phosphate... 221 3e-56 tr|B7FM78|B7FM78_MEDTR Putative uncharacterized protein OS=Medic... 220 5e-56 tr|Q8S4Y9|Q8S4Y9_ORYSA Glyceraldehyde-3-phosphate dehydrogenase ... 219 8e-56 tr|Q6Z9G0|Q6Z9G0_ORYSJ Os08g0440800 protein OS=Oryza sativa subs... 219 8e-56 tr|B8BB36|B8BB36_ORYSI Putative uncharacterized protein OS=Oryza... 219 8e-56 tr|A9PGH7|A9PGH7_POPTR Putative uncharacterized protein OS=Popul... 219 8e-56 tr|A7PFT1|A7PFT1_VITVI Chromosome chr11 scaffold_14, whole genom... 219 1e-55 tr|A5BHS5|A5BHS5_VITVI Putative uncharacterized protein OS=Vitis... 219 1e-55 tr|A9PEY4|A9PEY4_POPTR Putative uncharacterized protein OS=Popul... 215 2e-54 tr|Q6RCS1|Q6RCS1_PHYPA Non-phosphorylating GAPDH OS=Physcomitrel... 213 7e-54 tr|A9RHQ0|A9RHQ0_PHYPA GAPN OS=Physcomitrella patens subsp. pate... 213 7e-54 tr|A5BIP4|A5BIP4_VITVI Putative uncharacterized protein OS=Vitis... 212 2e-53 tr|A9SFH2|A9SFH2_PHYPA GAPN OS=Physcomitrella patens subsp. pate... 205 2e-51 tr|Q84PC4|Q84PC4_ORYSJ NADH-dependent glyceraldehyde-3-phosphate... 188 3e-46 tr|A9T112|A9T112_PHYPA GAPN OS=Physcomitrella patens subsp. pate... 183 8e-45 tr|A8IYT1|A8IYT1_CHLRE Glyceraldehyde 3-phosphate dehydrogenase,... 175 2e-42 tr|A3BTJ2|A3BTJ2_ORYSJ Putative uncharacterized protein OS=Oryza... 124 5e-27 tr|A4RYS8|A4RYS8_OSTLU Predicted protein OS=Ostreococcus lucimar... 113 8e-24 tr|B1GXK3|B1GXK3_PLAAC NADP-dependent glyceraldehyde-3-phosphate... 103 6e-21 tr|A9VGH0|A9VGH0_BACWK Aldehyde dehydrogenase OS=Bacillus weihen... 100 9e-20 tr|B7HXL3|B7HXL3_BACCE Glyceraldehyde-3-phosphate dehydrogenase,... 100 1e-19 tr|B5V5J4|B5V5J4_BACCE Glyceraldehyde-3-phosphate dehydrogenase,... 100 1e-19 tr|A7GLM2|A7GLM2_BACCN Aldehyde dehydrogenase OS=Bacillus cereus... 99 2e-19 tr|Q72ZZ6|Q72ZZ6_BACC1 Glyceraldehyde-3-phosphate dehydrogenase,... 99 3e-19 tr|Q6HMX0|Q6HMX0_BACHK Glyceraldehyde-3-phosphate dehydrogenase ... 99 3e-19 tr|Q81UL6|Q81UL6_BACAN Glyceraldehyde-3-phosphate dehydrogenase,... 98 5e-19 tr|Q81HE6|Q81HE6_BACCR NADP-dependent glyceraldehyde-3-phosphate... 98 5e-19 tr|Q73CX4|Q73CX4_BACC1 Glyceraldehyde-3-phosphate dehydrogenase,... 98 5e-19 tr|Q63FF8|Q63FF8_BACCZ Glyceraldehyde-3-phosphate dehydrogenase ... 98 5e-19
>tr|A7P5X2|A7P5X2_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032695001 PE=4 SV=1 Length = 496
Score = 222 bits (566), Expect = 1e-56 Identities = 108/135 (80%), Positives = 118/135 (87%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MAGSG F EI+D DVFKYY DG W+ S+SGKSV I NP+TR QYKVQACTQEEVNK +E Sbjct: 1 MAGSGVFAEILDGDVFKYYTDGAWKTSSSGKSVPIINPTTRSTQYKVQACTQEEVNKVME 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 +AK AQKLWAK PLWKRAE LHKAAAILK+ K PIA+CLVKEIAKPAKDAV+EVVRSGDL Sbjct: 61 TAKNAQKLWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 +SYCAEEGVRIL EG Sbjct: 121 VSYCAEEGVRILGEG 135
>tr|B4FR32|B4FR32_MAIZE NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays PE=2 SV=1 Length = 498
Score = 221 bits (563), Expect = 3e-56 Identities = 105/136 (77%), Positives = 122/136 (89%) Frame = +3
Query: 216 SMAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKAL 395 ++AG+G F EI+D +V++YYADGEWR SASGKSV I NP+TR+ QY+VQACTQEEVNKA+ Sbjct: 2 ALAGTGVFAEILDSEVYRYYADGEWRSSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAM 61
Query: 396 ESAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGD 575 ++AK AQK WA+ PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDAVSEVVRSGD Sbjct: 62 DAAKVAQKAWARTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGD 121
Query: 576 LISYCAEEGVRILSEG 623 L+SY AEEGVRIL EG Sbjct: 122 LVSYTAEEGVRILGEG 137
>tr|B7FM78|B7FM78_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 496
Score = 220 bits (561), Expect = 5e-56 Identities = 106/135 (78%), Positives = 119/135 (88%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MA +G EI+D DV+KYYADGEW+ S SGKSV I NP+TR+PQYKVQAC+QEEVNK ++ Sbjct: 1 MAATGVLAEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMD 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 SAKAAQK WAK PLWKRAE LHKAAAILK+HK IA+CLVKEIAKPAKDAV+EVVRSGDL Sbjct: 61 SAKAAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 +SYCAEEGVRIL EG Sbjct: 121 VSYCAEEGVRILGEG 135
>tr|Q8S4Y9|Q8S4Y9_ORYSA Glyceraldehyde-3-phosphate dehydrogenase OS=Oryza sativa PE=2 SV=1 Length = 507
Score = 219 bits (559), Expect = 8e-56 Identities = 104/138 (75%), Positives = 122/138 (88%) Frame = +3
Query: 210 VGSMAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNK 389 + ++AG+G F EI++ +V++YYADGEWRVSASGKSV I NP+TR QY+VQACTQEEVNK Sbjct: 1 MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNK 60
Query: 390 ALESAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRS 569 +E+AK AQK WA+ PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDA+SEVVRS Sbjct: 61 VMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRS 120
Query: 570 GDLISYCAEEGVRILSEG 623 GDL+SY AEEGVRIL EG Sbjct: 121 GDLVSYTAEEGVRILGEG 138
>tr|Q6Z9G0|Q6Z9G0_ORYSJ Os08g0440800 protein OS=Oryza sativa subsp. japonica GN=P0528B09.18 PE=2 SV=1 Length = 499
Score = 219 bits (559), Expect = 8e-56 Identities = 104/138 (75%), Positives = 122/138 (88%) Frame = +3
Query: 210 VGSMAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNK 389 + ++AG+G F EI++ +V++YYADGEWRVSASGKSV I NP+TR QY+VQACTQEEVNK Sbjct: 1 MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNK 60
Query: 390 ALESAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRS 569 +E+AK AQK WA+ PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDA+SEVVRS Sbjct: 61 VMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRS 120
Query: 570 GDLISYCAEEGVRILSEG 623 GDL+SY AEEGVRIL EG Sbjct: 121 GDLVSYTAEEGVRILGEG 138
>tr|B8BB36|B8BB36_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29378 PE=4 SV=1 Length = 499
Score = 219 bits (559), Expect = 8e-56 Identities = 104/138 (75%), Positives = 122/138 (88%) Frame = +3
Query: 210 VGSMAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNK 389 + ++AG+G F EI++ +V++YYADGEWRVSASGKSV I NP+TR QY+VQACTQEEVNK Sbjct: 1 MAAVAGTGVFAEILEGEVYRYYADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNK 60
Query: 390 ALESAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRS 569 +E+AK AQK WA+ PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDA+SEVVRS Sbjct: 61 VMETAKVAQKAWARTPLWKRAELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRS 120
Query: 570 GDLISYCAEEGVRILSEG 623 GDL+SY AEEGVRIL EG Sbjct: 121 GDLVSYTAEEGVRILGEG 138
>tr|A9PGH7|A9PGH7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 496
Score = 219 bits (559), Expect = 8e-56 Identities = 104/135 (77%), Positives = 122/135 (90%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MAG+G F EI+D D++KYY+DGEW+ S+SGK+V+I NP+TR+ QYKVQACTQEEVNK +E Sbjct: 1 MAGTGMFSEILDGDLYKYYSDGEWKKSSSGKTVSIVNPTTRKTQYKVQACTQEEVNKVME 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 SAK+AQK WAK PLWKRAE LHKAAAILK+HK PIA+CL+KEIAKPAKD+V+EVVRSGDL Sbjct: 61 SAKSAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLIKEIAKPAKDSVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 ISY AEEGVRIL EG Sbjct: 121 ISYTAEEGVRILGEG 135
>tr|A7PFT1|A7PFT1_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017234001 PE=4 SV=1 Length = 496
Score = 219 bits (557), Expect = 1e-55 Identities = 104/135 (77%), Positives = 121/135 (89%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MAG+G F EI+D DV+KYY++GEWR + SGKSV I NP+TR+ QY+VQAC+QEEVNKA+E Sbjct: 1 MAGTGVFAEIIDGDVYKYYSEGEWRKAVSGKSVAIINPTTRKTQYRVQACSQEEVNKAME 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 AK+AQK+WAK PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDAV+EVVRSGDL Sbjct: 61 IAKSAQKIWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 +SY AEEGVRIL EG Sbjct: 121 VSYTAEEGVRILGEG 135
>tr|A5BHS5|A5BHS5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034728 PE=4 SV=1 Length = 496
Score = 219 bits (557), Expect = 1e-55 Identities = 104/135 (77%), Positives = 121/135 (89%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MAG+G F EI+D DV+KYY++GEWR + SGKSV I NP+TR+ QY+VQAC+QEEVNKA+E Sbjct: 1 MAGTGVFAEIIDGDVYKYYSEGEWRKAVSGKSVAIINPTTRKTQYRVQACSQEEVNKAME 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 AK+AQK+WAK PLWKRAE LHKAAAILK+HK PIA+CLVKEIAKPAKDAV+EVVRSGDL Sbjct: 61 IAKSAQKIWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 +SY AEEGVRIL EG Sbjct: 121 VSYTAEEGVRILGEG 135
>tr|A9PEY4|A9PEY4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 496
Score = 215 bits (547), Expect = 2e-54 Identities = 102/135 (75%), Positives = 118/135 (87%) Frame = +3
Query: 219 MAGSGAFEEIVDKDVFKYYADGEWRVSASGKSVTITNPSTRQPQYKVQACTQEEVNKALE 398 MAG+G F EI+D D +KYY+DGEW+ S+SGK+V I NP+TR+ QYKVQAC QEEVNK +E Sbjct: 1 MAGTGVFSEILDGDAYKYYSDGEWKKSSSGKTVAIVNPTTRKTQYKVQACNQEEVNKVME 60
Query: 399 SAKAAQKLWAKVPLWKRAEALHKAAAILKQHKDPIAKCLVKEIAKPAKDAVSEVVRSGDL 578 AK+AQK WAK PLWKRAE LHKAAAILK+HK PIA+CL+KEIAKPAKD+V+EVVRSGDL Sbjct: 61 LAKSAQKTWAKTPLWKRAELLHKAAAILKEHKAPIAECLIKEIAKPAKDSVTEVVRSGDL 120
Query: 579 ISYCAEEGVRILSEG 623 ISY AEEGVRIL EG Sbjct: 121 ISYTAEEGVRILGEG 135
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