DK956704
Clone id TST39A01NGRL0026_G24
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_G24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAATCGCCATGCAACGCGCAGCTCGCGTTCGCTGCACAGGTTCGCTGCGTGTATATATGC
CGTACATGATTCTCCATTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTGTGTGTGTGTGTCTGCTTCTCTGCTGCTGGCCATGGTGATCTCAGTGGAGAACCCC
GTCCCTGCCCATGGCGGCCTCAACAACAGAAGGGCTCTCAACAATATGCATCAAACCCTC
CTACCCCTTAGCAGAGCTGCGGATCAACTCATCAATGAGTTTGGGAAGGGCCTCTCACAG
ATCTCTGATACCAAGGTGATGGAAAGAGAGGAAGAGAATGGTGACAATGCACCCAACCAG
CCTGCATCCACAGATGGAGATAAGCTGCATCAAAATGGAACCTCCATGGTGACCTTTGAT
AATGACGATGAAGATGAAGAAAATGATTATGATGATATTTTCTTTCCGGAGGACTATGTG
TCTGGCTATGGTGTTGATCAAAGAGATGATGGCACTGCAGACAATTGGGTTAAAAGGCAT
CCGGAGCTTGTTAGGCTGACGGGAAGGCACCCATTCAACTGCGA
■■Homology search results ■■ -
sp_hit_id P39864
Definition sp|P39864|NIA_PHYIN Nitrate reductase [NADPH] OS=Phytophthora infestans
Align length 29
Score (bit) 54.7
E-value 3.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956704|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_G24, 5'
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P39864|NIA_PHYIN Nitrate reductase [NADPH] OS=Phytophthora in... 55 3e-07
sp|P23312|NIA_SPIOL Nitrate reductase [NADH] OS=Spinacia olerace... 53 1e-06
sp|P27968|NIA7_HORVU Nitrate reductase [NAD(P)H] OS=Hordeum vulg... 52 2e-06
sp|P27969|NIA2_HORVU Nitrate reductase [NADH] (Fragment) OS=Hord... 52 2e-06
sp|P16081|NIA1_ORYSJ Nitrate reductase [NADH] 1 OS=Oryza sativa ... 52 2e-06
sp|P27967|NIA1_HORVU Nitrate reductase [NADH] OS=Hordeum vulgare... 52 2e-06
sp|P36841|NIA_VOLCA Nitrate reductase [NADH] OS=Volvox carteri G... 52 2e-06
sp|P17569|NIA_CUCMA Nitrate reductase [NADH] OS=Cucurbita maxima... 52 3e-06
sp|P43101|NIA_CICIN Nitrate reductase [NADH] OS=Cichorium intybu... 51 5e-06
sp|P11605|NIA1_TOBAC Nitrate reductase [NADH] 1 OS=Nicotiana tab... 50 6e-06
sp|P17570|NIA_SOLLC Nitrate reductase [NADH] OS=Solanum lycopers... 50 8e-06
sp|P39869|NIA_LOTJA Nitrate reductase [NADH] OS=Lotus japonicus ... 50 8e-06
sp|P39870|NIA2_SOYBN Inducible nitrate reductase [NADH] 2 OS=Gly... 50 8e-06
sp|P39865|NIA1_PHAVU Nitrate reductase [NADH] 1 OS=Phaseolus vul... 50 8e-06
sp|P36859|NIA_PETHY Nitrate reductase [NADH] OS=Petunia hybrida ... 49 1e-05
sp|P08509|NIA2_TOBAC Nitrate reductase [NADH] 2 OS=Nicotiana tab... 49 1e-05
sp|P27783|NIA_BETVE Nitrate reductase [NAD(P)H] OS=Betula verruc... 49 2e-05
sp|P11035|NIA2_ARATH Nitrate reductase [NADH] 2 OS=Arabidopsis t... 49 2e-05
sp|P39866|NIA2_PHAVU Nitrate reductase [NADH] 2 OS=Phaseolus vul... 49 2e-05
sp|P39868|NIA2_BRANA Nitrate reductase [NADH], clone PBNBR1412 O... 49 2e-05
sp|P54233|NIA1_SOYBN Inducible nitrate reductase [NADH] 1 OS=Gly... 47 9e-05
sp|P11832|NIA1_ARATH Nitrate reductase [NADH] 1 OS=Arabidopsis t... 46 2e-04
sp|P39867|NIA1_BRANA Nitrate reductase [NADH], clone PBNBR1405 O... 45 3e-04
sp|P49102|NIA3_MAIZE Nitrate reductase [NADH] 3 OS=Zea mays PE=3... 41 0.004
sp|Q05531|NIA_USTMA Nitrate reductase [NADPH] OS=Ustilago maydis... 37 0.055
sp|P39863|NIA_FUSOX Nitrate reductase [NADPH] OS=Fusarium oxyspo... 37 0.055
sp|P49050|NIA_PICAN Nitrate reductase [NADPH] OS=Pichia angusta ... 37 0.072
sp|P22945|NIA_EMENI Nitrate reductase [NADPH] OS=Emericella nidu... 34 0.47
sp|Q96NY9|MUS81_HUMAN Crossover junction endonuclease MUS81 OS=H... 34 0.47
sp|P36842|NIA_LEPMC Nitrate reductase [NADPH] OS=Leptosphaeria m... 33 1.0

>sp|P39864|NIA_PHYIN Nitrate reductase [NADPH] OS=Phytophthora
infestans GN=NIAA PE=3 SV=1
Length = 902

Score = 54.7 bits (130), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579
+D RD GT D WV RHPEL+RLTGRHPFN
Sbjct: 84 IDPRDVGTPDEWVPRHPELIRLTGRHPFN 112


>sp|P23312|NIA_SPIOL Nitrate reductase [NADH] OS=Spinacia oleracea
GN=NIA PE=1 SV=1
Length = 926

Score = 53.1 bits (126), Expect = 1e-06
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579
VD RD+GTAD W++R+P ++RLTG+HPFN
Sbjct: 106 VDSRDEGTADQWIERNPSMIRLTGKHPFN 134


>sp|P27968|NIA7_HORVU Nitrate reductase [NAD(P)H] OS=Hordeum vulgare
GN=NAR-7 PE=2 SV=1
Length = 891

Score = 52.4 bits (124), Expect = 2e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFN 579
D RD+ T+D WVKRHP LVRLTG+HPFN
Sbjct: 71 DPRDEATSDAWVKRHPALVRLTGKHPFN 98


>sp|P27969|NIA2_HORVU Nitrate reductase [NADH] (Fragment) OS=Hordeum
vulgare PE=2 SV=1
Length = 912

Score = 52.4 bits (124), Expect = 2e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFNC 582
D RD+GTAD W++R+P L+RLTG+HP NC
Sbjct: 89 DPRDEGTADAWIERNPSLIRLTGKHPLNC 117


>sp|P16081|NIA1_ORYSJ Nitrate reductase [NADH] 1 OS=Oryza sativa
subsp. japonica GN=NIA1 PE=2 SV=3
Length = 916

Score = 52.4 bits (124), Expect = 2e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFNC 582
D RD+GTAD W++R+P L+RLTG+HP NC
Sbjct: 95 DARDEGTADAWIERNPSLIRLTGKHPLNC 123


>sp|P27967|NIA1_HORVU Nitrate reductase [NADH] OS=Hordeum vulgare
PE=3 SV=1
Length = 915

Score = 52.4 bits (124), Expect = 2e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFNC 582
D RD+GTAD W++R+P L+RLTG+HP NC
Sbjct: 92 DPRDEGTADAWIERNPSLIRLTGKHPLNC 120


>sp|P36841|NIA_VOLCA Nitrate reductase [NADH] OS=Volvox carteri
GN=NITA PE=2 SV=1
Length = 864

Score = 52.0 bits (123), Expect = 2e-06
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1

Query: 475 YVSGYGVDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
+V VD++D T DNWV+R P ++RLTGRHP NC
Sbjct: 36 HVPAAAVDKKDQDTPDNWVRRDPRILRLTGRHPLNC 71


>sp|P17569|NIA_CUCMA Nitrate reductase [NADH] OS=Cucurbita maxima
PE=2 SV=1
Length = 918

Score = 51.6 bits (122), Expect = 3e-06
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579
+D RD+GTADNW++R+ +VRLTG+HPFN
Sbjct: 97 LDHRDEGTADNWIERNASMVRLTGKHPFN 125


>sp|P43101|NIA_CICIN Nitrate reductase [NADH] OS=Cichorium intybus
GN=NIA PE=2 SV=1
Length = 920

Score = 50.8 bits (120), Expect = 5e-06
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFN 579
D RD GTAD W++R+P +VRLTG+HPFN
Sbjct: 88 DPRDQGTADQWIERNPSMVRLTGKHPFN 115


>sp|P11605|NIA1_TOBAC Nitrate reductase [NADH] 1 OS=Nicotiana
tabacum GN=NIA1 PE=3 SV=1
Length = 904

Score = 50.4 bits (119), Expect = 6e-06
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFN 579
D RD+GTADNW++R+ L+RLTG+HPFN
Sbjct: 86 DSRDEGTADNWIERNFSLIRLTGKHPFN 113


tr_hit_id Q4LEW9
Definition tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate reductase (Nitrate reductase) OS=Physcomitrella patens
Align length 30
Score (bit) 61.6
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956704|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_G24, 5'
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate red... 62 3e-08
tr|Q4LEW8|Q4LEW8_PHYPA Pyridine nucleotide-dependent nitrate red... 62 3e-08
tr|A9SHD3|A9SHD3_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08
tr|A9S9L0|A9S9L0_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08
tr|A9S9K7|A9S9K7_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08
tr|Q9FUC2|Q9FUC2_RICCO Nitrate reductase OS=Ricinus communis GN=... 57 8e-07
tr|A7NV67|A7NV67_VITVI Chromosome chr18 scaffold_1, whole genome... 55 4e-06
tr|Q9SDY3|Q9SDY3_CHLRE Nitrate reductase OS=Chlamydomonas reinha... 53 1e-05
tr|A8J4P9|A8J4P9_CHLRE Nitrate reductase OS=Chlamydomonas reinha... 53 1e-05
tr|A4S3I7|A4S3I7_OSTLU Predicted protein (Fragment) OS=Ostreococ... 53 1e-05
tr|Q0J545|Q0J545_ORYSJ Os08g0468100 protein OS=Oryza sativa subs... 52 2e-05
tr|B8BBJ9|B8BBJ9_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|Q93XS1|Q93XS1_PRUPE Nitrate reductase OS=Prunus persica GN=Pp... 52 2e-05
tr|Q8H1T7|Q8H1T7_TILPL Nitrate reductase OS=Tilia platyphyllos G... 52 2e-05
tr|Q4JFI7|Q4JFI7_VOLCA Nitrate reductase OS=Volvox carteri GN=ni... 52 2e-05
tr|A8IJ84|A8IJ84_BETVU Nitrate reductase OS=Beta vulgaris GN=NR ... 52 2e-05
tr|Q9XGW5|Q9XGW5_MAIZE Nitrate reductase OS=Zea mays GN=NR1 PE=4... 51 4e-05
tr|Q6ZHH7|Q6ZHH7_ORYSJ Os02g0770800 protein OS=Oryza sativa subs... 51 4e-05
tr|Q6ZC33|Q6ZC33_ORYSJ Os08g0468700 protein OS=Oryza sativa subs... 51 4e-05
tr|B8BBK0|B8BBK0_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05
tr|B8AJ60|B8AJ60_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05
tr|A4S3H7|A4S3H7_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 4e-05
tr|A3ABS4|A3ABS4_ORYSJ Putative uncharacterized protein OS=Oryza... 51 4e-05
tr|A2YW32|A2YW32_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05
tr|Q9SYR0|Q9SYR0_SOYBN Nitrate reductase (Fragment) OS=Glycine m... 50 9e-05
tr|Q8LT13|Q8LT13_SOLTU Nitrate reductase OS=Solanum tuberosum GN... 50 9e-05
tr|O48930|O48930_SOYBN Nitrate reductase (Fragment) OS=Glycine m... 50 9e-05
tr|O24390|O24390_SOLTU NADH nitrate reductase OS=Solanum tuberos... 50 9e-05
tr|O04926|O04926_SOLTU NADH nitrate reductase OS=Solanum tuberos... 50 9e-05
tr|Q84LQ4|Q84LQ4_CHLEL Nitrate reductase OS=Chlorella ellipsoide... 50 1e-04

>tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate
reductase (Nitrate reductase) OS=Physcomitrella patens
GN=Nia1;1 PE=2 SV=1
Length = 891

Score = 61.6 bits (148), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
VD+RD GT+D+W+ RHPELVRLTGRHPFNC
Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112


>tr|Q4LEW8|Q4LEW8_PHYPA Pyridine nucleotide-dependent nitrate
reductase (Nitrate reductase) OS=Physcomitrella patens
GN=Nia1;2 PE=2 SV=1
Length = 892

Score = 61.6 bits (148), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
VD+RD GT+D+W+ RHPELVRLTGRHPFNC
Sbjct: 88 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 117


>tr|A9SHD3|A9SHD3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_184973 PE=4 SV=1
Length = 892

Score = 61.6 bits (148), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
VD+RD GT+D+W+ RHPELVRLTGRHPFNC
Sbjct: 88 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 117


>tr|A9S9L0|A9S9L0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209989 PE=4 SV=1
Length = 891

Score = 61.6 bits (148), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
VD+RD GT+D+W+ RHPELVRLTGRHPFNC
Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112


>tr|A9S9K7|A9S9K7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_126122 PE=4 SV=1
Length = 892

Score = 61.6 bits (148), Expect = 3e-08
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
VD+RD GT+D+W+ RHPELVRLTGRHPFNC
Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112


>tr|Q9FUC2|Q9FUC2_RICCO Nitrate reductase OS=Ricinus communis GN=NIA
PE=2 SV=1
Length = 914

Score = 57.0 bits (136), Expect = 8e-07
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579
+D RD+GTADNWV+RHP ++RLTG+HPFN
Sbjct: 88 LDPRDEGTADNWVERHPSMIRLTGKHPFN 116


>tr|A7NV67|A7NV67_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015320001
PE=4 SV=1
Length = 647

Score = 54.7 bits (130), Expect = 4e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +1

Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579
+D RD+GTADNW++R+P +VRLTG+HPFN
Sbjct: 89 LDSRDEGTADNWIQRNPSMVRLTGKHPFN 117


>tr|Q9SDY3|Q9SDY3_CHLRE Nitrate reductase OS=Chlamydomonas
reinhardtii GN=NIT1 PE=4 SV=1
Length = 882

Score = 52.8 bits (125), Expect = 1e-05
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Frame = +1

Query: 466 PED-----YVSGYGVDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
PED +V VD+RD T DNWV+R P ++RLTGRHP NC
Sbjct: 39 PEDADWSQHVLPSAVDKRDQDTPDNWVRRDPRILRLTGRHPLNC 82


>tr|A8J4P9|A8J4P9_CHLRE Nitrate reductase OS=Chlamydomonas
reinhardtii GN=NIT1 PE=4 SV=1
Length = 882

Score = 52.8 bits (125), Expect = 1e-05
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Frame = +1

Query: 466 PED-----YVSGYGVDQRDDGTADNWVKRHPELVRLTGRHPFNC 582
PED +V VD+RD T DNWV+R P ++RLTGRHP NC
Sbjct: 39 PEDADWSQHVLPSAVDKRDQDTPDNWVRRDPRILRLTGRHPLNC 82


>tr|A4S3I7|A4S3I7_OSTLU Predicted protein (Fragment) OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_3554 PE=4 SV=1
Length = 375

Score = 52.8 bits (125), Expect = 1e-05
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1

Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFN 579
D+RD T DNWVKRHP L+RLTG+HPFN
Sbjct: 1 DERDLKTPDNWVKRHPNLIRLTGKHPFN 28