DK956704 |
Clone id |
TST39A01NGRL0026_G24 |
Library |
TST39 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_G24. 5' end sequence. |
Accession |
DK956704 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2094Contig1 |
Sequence |
GAATCGCCATGCAACGCGCAGCTCGCGTTCGCTGCACAGGTTCGCTGCGTGTATATATGC CGTACATGATTCTCCATTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTGTGTGTGTGTGTCTGCTTCTCTGCTGCTGGCCATGGTGATCTCAGTGGAGAACCCC GTCCCTGCCCATGGCGGCCTCAACAACAGAAGGGCTCTCAACAATATGCATCAAACCCTC CTACCCCTTAGCAGAGCTGCGGATCAACTCATCAATGAGTTTGGGAAGGGCCTCTCACAG ATCTCTGATACCAAGGTGATGGAAAGAGAGGAAGAGAATGGTGACAATGCACCCAACCAG CCTGCATCCACAGATGGAGATAAGCTGCATCAAAATGGAACCTCCATGGTGACCTTTGAT AATGACGATGAAGATGAAGAAAATGATTATGATGATATTTTCTTTCCGGAGGACTATGTG TCTGGCTATGGTGTTGATCAAAGAGATGATGGCACTGCAGACAATTGGGTTAAAAGGCAT CCGGAGCTTGTTAGGCTGACGGGAAGGCACCCATTCAACTGCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P39864 |
Definition |
sp|P39864|NIA_PHYIN Nitrate reductase [NADPH] OS=Phytophthora infestans |
Align length |
29 |
Score (bit) |
54.7 |
E-value |
3.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4LEW9 |
Definition |
tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate reductase (Nitrate reductase) OS=Physcomitrella patens |
Align length |
30 |
Score (bit) |
61.6 |
E-value |
3.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956704|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_G24, 5' (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate red... 62 3e-08 tr|Q4LEW8|Q4LEW8_PHYPA Pyridine nucleotide-dependent nitrate red... 62 3e-08 tr|A9SHD3|A9SHD3_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|A9S9L0|A9S9L0_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|A9S9K7|A9S9K7_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|Q9FUC2|Q9FUC2_RICCO Nitrate reductase OS=Ricinus communis GN=... 57 8e-07 tr|A7NV67|A7NV67_VITVI Chromosome chr18 scaffold_1, whole genome... 55 4e-06 tr|Q9SDY3|Q9SDY3_CHLRE Nitrate reductase OS=Chlamydomonas reinha... 53 1e-05 tr|A8J4P9|A8J4P9_CHLRE Nitrate reductase OS=Chlamydomonas reinha... 53 1e-05 tr|A4S3I7|A4S3I7_OSTLU Predicted protein (Fragment) OS=Ostreococ... 53 1e-05 tr|Q0J545|Q0J545_ORYSJ Os08g0468100 protein OS=Oryza sativa subs... 52 2e-05 tr|B8BBJ9|B8BBJ9_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|Q93XS1|Q93XS1_PRUPE Nitrate reductase OS=Prunus persica GN=Pp... 52 2e-05 tr|Q8H1T7|Q8H1T7_TILPL Nitrate reductase OS=Tilia platyphyllos G... 52 2e-05 tr|Q4JFI7|Q4JFI7_VOLCA Nitrate reductase OS=Volvox carteri GN=ni... 52 2e-05 tr|A8IJ84|A8IJ84_BETVU Nitrate reductase OS=Beta vulgaris GN=NR ... 52 2e-05 tr|Q9XGW5|Q9XGW5_MAIZE Nitrate reductase OS=Zea mays GN=NR1 PE=4... 51 4e-05 tr|Q6ZHH7|Q6ZHH7_ORYSJ Os02g0770800 protein OS=Oryza sativa subs... 51 4e-05 tr|Q6ZC33|Q6ZC33_ORYSJ Os08g0468700 protein OS=Oryza sativa subs... 51 4e-05 tr|B8BBK0|B8BBK0_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|B8AJ60|B8AJ60_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A4S3H7|A4S3H7_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 4e-05 tr|A3ABS4|A3ABS4_ORYSJ Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|A2YW32|A2YW32_ORYSI Putative uncharacterized protein OS=Oryza... 51 4e-05 tr|Q9SYR0|Q9SYR0_SOYBN Nitrate reductase (Fragment) OS=Glycine m... 50 9e-05 tr|Q8LT13|Q8LT13_SOLTU Nitrate reductase OS=Solanum tuberosum GN... 50 9e-05 tr|O48930|O48930_SOYBN Nitrate reductase (Fragment) OS=Glycine m... 50 9e-05 tr|O24390|O24390_SOLTU NADH nitrate reductase OS=Solanum tuberos... 50 9e-05 tr|O04926|O04926_SOLTU NADH nitrate reductase OS=Solanum tuberos... 50 9e-05 tr|Q84LQ4|Q84LQ4_CHLEL Nitrate reductase OS=Chlorella ellipsoide... 50 1e-04
>tr|Q4LEW9|Q4LEW9_PHYPA Pyridine nucleotide-dependent nitrate reductase (Nitrate reductase) OS=Physcomitrella patens GN=Nia1;1 PE=2 SV=1 Length = 891
Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 VD+RD GT+D+W+ RHPELVRLTGRHPFNC Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112
>tr|Q4LEW8|Q4LEW8_PHYPA Pyridine nucleotide-dependent nitrate reductase (Nitrate reductase) OS=Physcomitrella patens GN=Nia1;2 PE=2 SV=1 Length = 892
Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 VD+RD GT+D+W+ RHPELVRLTGRHPFNC Sbjct: 88 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 117
>tr|A9SHD3|A9SHD3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_184973 PE=4 SV=1 Length = 892
Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 VD+RD GT+D+W+ RHPELVRLTGRHPFNC Sbjct: 88 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 117
>tr|A9S9L0|A9S9L0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209989 PE=4 SV=1 Length = 891
Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 VD+RD GT+D+W+ RHPELVRLTGRHPFNC Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112
>tr|A9S9K7|A9S9K7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126122 PE=4 SV=1 Length = 892
Score = 61.6 bits (148), Expect = 3e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 VD+RD GT+D+W+ RHPELVRLTGRHPFNC Sbjct: 83 VDERDKGTSDDWIPRHPELVRLTGRHPFNC 112
>tr|Q9FUC2|Q9FUC2_RICCO Nitrate reductase OS=Ricinus communis GN=NIA PE=2 SV=1 Length = 914
Score = 57.0 bits (136), Expect = 8e-07 Identities = 21/29 (72%), Positives = 27/29 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579 +D RD+GTADNWV+RHP ++RLTG+HPFN Sbjct: 88 LDPRDEGTADNWVERHPSMIRLTGKHPFN 116
>tr|A7NV67|A7NV67_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015320001 PE=4 SV=1 Length = 647
Score = 54.7 bits (130), Expect = 4e-06 Identities = 20/29 (68%), Positives = 27/29 (93%) Frame = +1
Query: 493 VDQRDDGTADNWVKRHPELVRLTGRHPFN 579 +D RD+GTADNW++R+P +VRLTG+HPFN Sbjct: 89 LDSRDEGTADNWIQRNPSMVRLTGKHPFN 117
>tr|Q9SDY3|Q9SDY3_CHLRE Nitrate reductase OS=Chlamydomonas reinhardtii GN=NIT1 PE=4 SV=1 Length = 882
Score = 52.8 bits (125), Expect = 1e-05 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%) Frame = +1
Query: 466 PED-----YVSGYGVDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 PED +V VD+RD T DNWV+R P ++RLTGRHP NC Sbjct: 39 PEDADWSQHVLPSAVDKRDQDTPDNWVRRDPRILRLTGRHPLNC 82
>tr|A8J4P9|A8J4P9_CHLRE Nitrate reductase OS=Chlamydomonas reinhardtii GN=NIT1 PE=4 SV=1 Length = 882
Score = 52.8 bits (125), Expect = 1e-05 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%) Frame = +1
Query: 466 PED-----YVSGYGVDQRDDGTADNWVKRHPELVRLTGRHPFNC 582 PED +V VD+RD T DNWV+R P ++RLTGRHP NC Sbjct: 39 PEDADWSQHVLPSAVDKRDQDTPDNWVRRDPRILRLTGRHPLNC 82
>tr|A4S3I7|A4S3I7_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_3554 PE=4 SV=1 Length = 375
Score = 52.8 bits (125), Expect = 1e-05 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +1
Query: 496 DQRDDGTADNWVKRHPELVRLTGRHPFN 579 D+RD T DNWVKRHP L+RLTG+HPFN Sbjct: 1 DERDLKTPDNWVKRHPNLIRLTGKHPFN 28
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