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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956731
Clone id TST39A01NGRL0026_I03
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_I03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCTTTTTGGGCCTCGACATTGGCAGCACAAACAGCAGGAGGGCAGGCCCTCACCACAA
TAAGCACACAGAGCCCGCGAAAACTCTCTCCCGCAGAGACTTGTCCTTCATTGTCCAGAG
ACGTTCCGAAAAAGCAGGCGTTAGGTGTAAGTAAGTAAGGTGAAGTTTTCGCAGCTCCAG
GTAACTGGAGAGGAGGCGGAGTAATGGCAAGTGTGCCAGCTCCTACAACAGCTTCGTTAT
ATGTTGGCGACCTTGATTCAAATGTAGCTGAAGCCCAGTTGTATGACCTCTTTTCCCAAG
TTGGACCAGTAGCTTCTATAAGAGTATGTCGAGACTCTGTATCTCGGCGTTCACTTGGTT
ATGCGTATGTGAACTTCAATGCATCTGCTGATGAAAGTGCAGCTGTCCGAGCTTTGGAAT
CTTTAAACTTCACACCCCTCAATGGGAAAGCTATTAGGATTATGTGGTCTCATCGAGACC
CAAGCAGTCGGAAAAGTGGCTTGGGAAACCTTTTTGTTAAGAGTCTTCATGAGTCTATCG
GTAACAAGGAGCTCCATGATCAGTTTTCGCCAATCGGAAAGATCCTTTCATGCAAAAGTG
GCAATGCAGGATGGTAAAAGCAAGGGGTACGGC
■■Homology search results ■■ -
sp_hit_id P31209
Definition sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe
Align length 126
Score (bit) 161.0
E-value 2.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956731|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_I03, 5'
         (633 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ...   161   2e-39
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ...   160   4e-39
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ...   160   4e-39
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ...   160   4e-39
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ...   160   5e-39
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ...   160   5e-39
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ...   160   5e-39
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ...   159   9e-39
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ...   159   1e-38
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop...   159   1e-38
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no...   159   1e-38
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus...   159   1e-38
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa...   159   1e-38
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau...   159   1e-38
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...   158   2e-38
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...   158   2e-38
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa...   158   2e-38
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop...   158   3e-38
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...   157   3e-38
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ...   157   4e-38
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ...   157   4e-38
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ...   157   4e-38
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a...   157   4e-38
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ...   155   1e-37
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ...   154   3e-37
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ...   154   3e-37
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...   154   3e-37
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ...   154   5e-37
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho...   153   8e-37
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ...   153   8e-37

>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2
          Length = 653

 Score =  161 bits (408), Expect = 2e-39
 Identities = 79/126 (62%), Positives = 98/126 (77%)
 Frame = +3

Query: 219 APTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADES 398
           APT+ASLYVG+LD +V EA L++LF+ +GPVASIRVCRD+V+RRSLGYAYVNF+   D  
Sbjct: 76  APTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMED-- 133

Query: 399 AAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIG 578
              +AL+ LN+T + G+  RIMWS RDPS RK G GN+F+K+L  +I NK LHD FS  G
Sbjct: 134 -GEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFG 192

Query: 579 KILSCK 596
           KILSCK
Sbjct: 193 KILSCK 198



 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ +LD+ + E +  DLF Q G + S+ + +D  + +  G+ +VN+   A+   A +A
Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNY---ANHECAQKA 317

Query: 414 LESLNFTPLNGKAI---RIMWSH-RDPSSRK-------------SGLGNLFVKSLHESIG 542
           ++ LN     GK +   R    H R+   RK              G+ NLF+K+L + + 
Sbjct: 318 VDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGV-NLFIKNLQDEVD 376

Query: 543 NKELHDQFSPIGKILSCK 596
           ++ L  +FS  G I S K
Sbjct: 377 DERLKAEFSAFGTITSAK 394


>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
           PE=3 SV=1
          Length = 753

 Score =  160 bits (406), Expect = 4e-39
 Identities = 80/129 (62%), Positives = 98/129 (75%)
 Frame = +3

Query: 210 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 389
           S   P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 41  STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100

Query: 390 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFS 569
           D     RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+
Sbjct: 101 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFA 157

Query: 570 PIGKILSCK 596
             G ILSCK
Sbjct: 158 AFGNILSCK 166



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ +LD  ++E +   +F + G + S  + RD   + S G+ +VN++      AAV  
Sbjct: 230 NVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGK-SRGFGFVNYSTHDSAQAAV-- 286

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
            + +N   + G+ + +  + +                 + +S+  G+ NL+VK+L + I 
Sbjct: 287 -DEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDID 344

Query: 543 NKELHDQFSPIGKILSCK 596
           +++L + F+P G I S K
Sbjct: 345 DEKLREMFAPYGTITSAK 362


>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
           A1513) GN=pab1 PE=3 SV=1
          Length = 731

 Score =  160 bits (406), Expect = 4e-39
 Identities = 82/134 (61%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
 Frame = +3

Query: 210 SVPAPT-----TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVN 374
           S PAP      +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN
Sbjct: 42  STPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 101

Query: 375 FNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKEL 554
           +N +AD     RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK L
Sbjct: 102 YNNTAD---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKAL 158

Query: 555 HDQFSPIGKILSCK 596
           HD F+  G ILSCK
Sbjct: 159 HDTFAAFGNILSCK 172



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ +LDS + + +   +F + G + S  + RD   + S G+ +VNF+      AAV  
Sbjct: 236 NVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVEE 294

Query: 414 LESLNFTPLNGKAIRIMWSHR--------------DPSSRKSGLGNLFVKSLHESIGNKE 551
           +             R    H               + +S+  G+ NL+VK+L + I +++
Sbjct: 295 MNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDIDDEK 353

Query: 552 LHDQFSPIGKILSCK 596
           L + F P G I S K
Sbjct: 354 LRELFGPYGTITSAK 368



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++++ +LDS +    L+D F+  G + S +V +D     S GY +V++  +    AA  A
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 198

Query: 414 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVKSLHESIGNKELHDQFSPI 575
           ++ +N   LN K + +    S +D  S+    K+   N+++K+L   I + E    F   
Sbjct: 199 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKF 258

Query: 576 GKILS 590
           G+I S
Sbjct: 259 GEITS 263


>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
          Length = 753

 Score =  160 bits (406), Expect = 4e-39
 Identities = 80/129 (62%), Positives = 98/129 (75%)
 Frame = +3

Query: 210 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 389
           S   P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 45  SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104

Query: 390 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFS 569
           D     RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+
Sbjct: 105 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFA 161

Query: 570 PIGKILSCK 596
             G ILSCK
Sbjct: 162 AFGNILSCK 170



 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ ++D  V + +   +F + G + S  + RD   + S G+ +VNF+      AAV  
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAV-- 290

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
            + +N   + G+ + +  + +                 + +S+  G+ NL+VK+L + + 
Sbjct: 291 -DEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDVD 348

Query: 543 NKELHDQFSPIGKILSCK 596
           +++L + FSP G I S K
Sbjct: 349 DEKLRELFSPFGTITSAK 366



 Score = 32.3 bits (72), Expect = 2.1
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVS 344
           +LYV +L  +V + +L +LFS  G + S +V RD+V+
Sbjct: 337 NLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373


>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
           3700 / NRRL 181) GN=pab1 PE=3 SV=1
          Length = 751

 Score =  160 bits (405), Expect = 5e-39
 Identities = 80/129 (62%), Positives = 98/129 (75%)
 Frame = +3

Query: 210 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 389
           S   P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 45  SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104

Query: 390 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFS 569
           D     RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+
Sbjct: 105 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFA 161

Query: 570 PIGKILSCK 596
             G ILSCK
Sbjct: 162 AFGNILSCK 170



 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ ++D  V + +   +F + G + S  + RD   + S G+ +VNF+      AAV  
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAV-- 290

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
            + +N   + G+ + +  + +                 + +S+  G+ NL+VK+L + + 
Sbjct: 291 -DEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDVD 348

Query: 543 NKELHDQFSPIGKILSCK 596
           +++L + FSP G I S K
Sbjct: 349 DEKLRELFSPFGTITSAK 366



 Score = 32.3 bits (72), Expect = 2.1
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVS 344
           +LYV +L  +V + +L +LFS  G + S +V RD+V+
Sbjct: 337 NLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373


>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
          Length = 765

 Score =  160 bits (405), Expect = 5e-39
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = +3

Query: 222 PTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESA 401
           P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +AD   
Sbjct: 46  PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTAD--- 102

Query: 402 AVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGK 581
             RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+  G 
Sbjct: 103 GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGN 162

Query: 582 ILSCK 596
           ILSCK
Sbjct: 163 ILSCK 167



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ ++D +V E +  +LF + G + S  + RD   + S G+ +VNF+      AAV  
Sbjct: 231 NVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVDE 289

Query: 414 LESLNFTPLNGKAIRIMWSHR--------------DPSSRKSGLGNLFVKSLHESIGNKE 551
           +             R    H               + +S+  G+ NL+VK+L + + +++
Sbjct: 290 MNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDVDDEK 348

Query: 552 LHDQFSPIGKILSCK 596
           L + F P G I S K
Sbjct: 349 LRELFGPYGTITSAK 363



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++++ +LDS +    L+D F+  G + S +V +D     S GY +V++  +    AA  A
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 193

Query: 414 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVKSLHESIGNKELHDQFSPI 575
           ++ +N   LN K + +    S +D  S+    K+   N+++K++ + +  +E  + F   
Sbjct: 194 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKF 253

Query: 576 GKILS 590
           G+I S
Sbjct: 254 GEITS 258


>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
          Length = 754

 Score =  160 bits (405), Expect = 5e-39
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = +3

Query: 222 PTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESA 401
           P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +AD   
Sbjct: 48  PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTAD--- 104

Query: 402 AVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGK 581
             RALE LN+T + GK  RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+  G 
Sbjct: 105 GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGN 164

Query: 582 ILSCK 596
           ILSCK
Sbjct: 165 ILSCK 169



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ ++D +V E +   +F Q G + S  + RD   + S G+ +VN++      AAV  
Sbjct: 233 NIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGK-SRGFGFVNYSTHESAQAAVDE 291

Query: 414 LESLNFTPLNGKAIRIMWSHR--------------DPSSRKSGLGNLFVKSLHESIGNKE 551
           +             R    H               + +S+  G+ NL+VK+L + + +++
Sbjct: 292 MHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGV-NLYVKNLTDDVDDEK 350

Query: 552 LHDQFSPIGKILSCK 596
           L + F P G I S K
Sbjct: 351 LRELFGPYGTITSAK 365



 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++++ +LDS +    L+D F+  G + S +V +D     S GY +V++  +    AA  A
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 195

Query: 414 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVKSLHESIGNKELHDQFSPI 575
           ++ +N   LN K + +    S +D  S+    K+   N+++K++   +  +E    F   
Sbjct: 196 IKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQF 255

Query: 576 GKILS 590
           G+I S
Sbjct: 256 GEITS 260


>sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1
          Length = 579

 Score =  159 bits (403), Expect = 9e-39
 Identities = 78/123 (63%), Positives = 94/123 (76%)
 Frame = +3

Query: 228 TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAV 407
           +ASLYVGDLD +V+EA LYD+FS +G V+SIRVCRD++++ SLGYAYVNFN   D  AA 
Sbjct: 34  SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFN---DHDAAK 90

Query: 408 RALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGKIL 587
            A+E LNFTP+ GK  RIMWS RDPS RK G GN+F+K+LH  I NK L+D FS  G IL
Sbjct: 91  TAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNIL 150

Query: 588 SCK 596
           S K
Sbjct: 151 SSK 153



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ ++++   + +  +L ++ G   S+ V   +    + G+ +VNF    D   AV+ 
Sbjct: 217 NVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHED---AVKC 272

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
           +E LN T   G+ + +  + +                 +  ++  G+ NLF+K+L +SI 
Sbjct: 273 VEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGI-NLFIKNLDDSID 331

Query: 543 NKELHDQFSPIGKILSCK 596
           +K+L ++F+P G I S K
Sbjct: 332 DKKLEEEFAPYGTITSAK 349


>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
          Length = 764

 Score =  159 bits (401), Expect = 1e-38
 Identities = 88/169 (52%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
 Frame = +3

Query: 93  AETCPSLSRDVPKKQALGVSK*GEVFAAPGNWRGGGVMASVPAP-TTASLYVGDLDSNVA 269
           A   P  +  VP+ QA G        AAP          + P P  +ASLYVG+LD +V 
Sbjct: 26  AAPAPIDTSAVPEAQAEGAE------AAP-------TPTAAPHPQASASLYVGELDPSVT 72

Query: 270 EAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRALESLNFTPLNGK 449
           EA L++LFSQ+G VASIRVCRD+V+RRSLGYAYVN+N +AD     +ALE LN+T + G+
Sbjct: 73  EAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTAD---GEKALEELNYTLIKGR 129

Query: 450 AIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGKILSCK 596
             RIMWS RDP+ RK+G GN+F+K+L  +I NK LHD F+  G ILSCK
Sbjct: 130 PCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV ++++ V + +  +LF++ G V S  + RD    +S G+ +VNF       AA +A
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKSRGFGFVNFTT---HEAAAQA 297

Query: 414 LESLNFTPLNGKAI---RIMWSH-RDPSSRKS-------------GLGNLFVKSLHESIG 542
           ++ LN     G+ +   R    H R+   RKS             G+ NL++K+L + + 
Sbjct: 298 VDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGV-NLYIKNLGDDVD 356

Query: 543 NKELHDQFSPIGKILSCK 596
           + +L   FS  G I S K
Sbjct: 357 DDKLRAMFSEYGPITSAK 374



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSV 341
           +LY+ +L  +V + +L  +FS+ GP+ S +V RDS+
Sbjct: 345 NLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSL 380


>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus
           laevis GN=pabpc1-B PE=2 SV=1
          Length = 633

 Score =  159 bits (401), Expect = 1e-38
 Identities = 79/129 (61%), Positives = 96/129 (74%)
 Frame = +3

Query: 210 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 389
           S P+   ASLYVGDL  +V EA LY+ FS  GP+ SIRVCRD ++RRSLGYAYVNF   A
Sbjct: 4   SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA 63

Query: 390 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFS 569
           D   A RAL+++NF  + GK +RIMWS RDPS RKSG+GN+F+K+L +SI NK L+D FS
Sbjct: 64  D---AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120

Query: 570 PIGKILSCK 596
             G ILSCK
Sbjct: 121 AFGNILSCK 129



 Score = 54.3 bits (129), Expect(2) = 3e-08
 Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++Y+ +   ++ + +L + F Q G   S++V  D   + S G+ +V+F    D   A +A
Sbjct: 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK-SRGFGFVSFERHED---AQKA 247

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
           ++ +N   LNGKAI +  + +                 D  +R  G+ NL+VK+L + I 
Sbjct: 248 VDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGID 306

Query: 543 NKELHDQFSPIGKILSCK 596
           ++ L  +F+P G I S K
Sbjct: 307 DERLRKEFTPFGSITSAK 324



 Score = 23.9 bits (50), Expect(2) = 3e-08
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 592 AKVAMQDGKSKGYG 633
           AKV M+ G+SKG+G
Sbjct: 323 AKVMMEGGRSKGFG 336



 Score = 32.0 bits (71), Expect = 2.7
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 477 DPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGKILSCK 596
           +PS+    + +L+V  LH  +    L+++FSP G ILS +
Sbjct: 2   NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIR 41
tr_hit_id O64985
Definition tr|O64985|O64985_CHLRE Poly(A) binding protein RB47 OS=Chlamydomonas reinhardtii
Align length 139
Score (bit) 178.0
E-value 2.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956731|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_I03, 5'
         (633 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O64985|O64985_CHLRE Poly(A) binding protein RB47 OS=Chlamydom...   178   2e-43
tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47 OS=Chl...   178   2e-43
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten...   170   6e-41
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten...   170   7e-41
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten...   167   5e-40
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten...   165   2e-39
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos...   165   2e-39
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu...   164   4e-39
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma...   164   5e-39
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs...   163   7e-39
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ...   163   7e-39
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos...   163   7e-39
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza...   163   7e-39
tr|A7TH03|A7TH03_VANPO Putative uncharacterized protein OS=Vande...   163   9e-39
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ...   161   3e-38
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs...   161   3e-38
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza...   161   3e-38
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil...   160   5e-38
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil...   160   6e-38
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog...   160   6e-38
tr|B2CJ74|B2CJ74_9HYPO Poly(A) RNA binding protein OS=Epichloe f...   160   6e-38
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti...   160   8e-38
tr|B8CFU7|B8CFU7_THAPS Polyadenlyte binding protein (Fragment) O...   160   8e-38
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs...   159   1e-37
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza...   159   1e-37
tr|B2AQY9|B2AQY9_PODAN Predicted CDS Pa_4_9240 OS=Podospora anse...   159   1e-37
tr|B6NQU3|B6NQU3_BRAFL Putative uncharacterized protein OS=Branc...   159   1e-37
tr|B6KWG7|B6KWG7_BRAFL Putative uncharacterized protein (Fragmen...   159   1e-37
tr|A6RJZ8|A6RJZ8_BOTFB Putative uncharacterized protein OS=Botry...   159   1e-37
tr|A6RAN8|A6RAN8_AJECN Polyadenylate-binding protein OS=Ajellomy...   159   1e-37

>tr|O64985|O64985_CHLRE Poly(A) binding protein RB47
           OS=Chlamydomonas reinhardtii GN=PABP PE=2 SV=1
          Length = 623

 Score =  178 bits (452), Expect = 2e-43
 Identities = 88/139 (63%), Positives = 111/139 (79%), Gaps = 9/139 (6%)
 Frame = +3

Query: 207 ASVPAPTT---------ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLG 359
           +S PA TT         +SLYVGDL+ +V EAQL++LFS VGPVASIRVCRD+V+RRSLG
Sbjct: 6   SSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLG 65

Query: 360 YAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESI 539
           YAYVN+N++ D  AA RA+E+LN+  +NGK +RIMWSHRDPS+RKSG+GN+F+K+L ++I
Sbjct: 66  YAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKTI 125

Query: 540 GNKELHDQFSPIGKILSCK 596
             K LHD FS  GKILSCK
Sbjct: 126 DAKALHDTFSAFGKILSCK 144


>tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47
           OS=Chlamydomonas reinhardtii GN=RB47 PE=4 SV=1
          Length = 636

 Score =  178 bits (452), Expect = 2e-43
 Identities = 88/139 (63%), Positives = 111/139 (79%), Gaps = 9/139 (6%)
 Frame = +3

Query: 207 ASVPAPTT---------ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLG 359
           +S PA TT         +SLYVGDL+ +V EAQL++LFS VGPVASIRVCRD+V+RRSLG
Sbjct: 6   SSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLG 65

Query: 360 YAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESI 539
           YAYVN+N++ D  AA RA+E+LN+  +NGK +RIMWSHRDPS+RKSG+GN+F+K+L ++I
Sbjct: 66  YAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKTI 125

Query: 540 GNKELHDQFSPIGKILSCK 596
             K LHD FS  GKILSCK
Sbjct: 126 DAKALHDTFSAFGKILSCK 144



 Score = 44.3 bits (103), Expect = 0.006
 Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
 Frame = +3

Query: 207 ASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNAS 386
           A  P     +++V +L +++ + +L  + ++ G + S  V +D     S G+ ++NF   
Sbjct: 193 ADRPQDVYTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDKGG-SKGFGFINFK-- 249

Query: 387 ADESAAVRALESLNFTPLNGKAI-----------------RIMWSHRDPSSRKSGLGNLF 515
            D  +A + +E LN   ++GK +                 +   S ++   +  G+ NL+
Sbjct: 250 -DAESAAKCVEYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQERYLKYQGM-NLY 307

Query: 516 VKSLHESIGNKELHDQFSPIGKILSCK 596
           VK+L + + +  L + F+  G I SCK
Sbjct: 308 VKNLSDEVDDDALRELFANSGTITSCK 334



 Score = 39.3 bits (90), Expect = 0.20
 Identities = 27/81 (33%), Positives = 44/81 (54%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LYV +L   V +  L +LF+  G + S +V +D  S +S G+ +V F  S DE  A RA
Sbjct: 305 NLYVKNLSDEVDDDALRELFANSGTITSCKVMKDG-SGKSKGFGFVCF-TSHDE--ATRA 360

Query: 414 LESLNFTPLNGKAIRIMWSHR 476
           +  +N   + GK + +  + R
Sbjct: 361 VTEMNGKMVKGKPLYVALAQR 381


>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
          Length = 439

 Score =  170 bits (431), Expect = 6e-41
 Identities = 88/133 (66%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
 Frame = +3

Query: 207 ASVPAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 377
           AS PAPT   + SLYVGDL+ NV+EAQLY++FSQVG V SIRVCRD ++RRSLGY+YVN+
Sbjct: 13  ASGPAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNY 72

Query: 378 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELH 557
           N + D   A RALE LNFT +NGK IRIM+SHRDPS RKSG  N+F+K+L +SI NK LH
Sbjct: 73  NNAQD---ATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALH 129

Query: 558 DQFSPIGKILSCK 596
           D F+  G ILSCK
Sbjct: 130 DTFAAFGNILSCK 142



 Score = 46.2 bits (108), Expect = 0.002
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV +L     + +L  +F   GP++S  V RD+   +S  + +VNF    D + AV A
Sbjct: 204 NVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDN-DGKSKCFGFVNFEHPDDAAKAVEA 262

Query: 414 LESLNFTPLN---GKA-----------IRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKE 551
           L+   F       G+A            +     ++   +  G+ NL++K+L +++ +++
Sbjct: 263 LQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGV-NLYLKNLDDTVDDEK 321

Query: 552 LHDQFSPIGKILSCK 596
           + + F+  G I SCK
Sbjct: 322 IRELFAEYGTITSCK 336



 Score = 38.5 bits (88), Expect = 0.34
 Identities = 26/86 (30%), Positives = 46/86 (53%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD  V + ++ +LF++ G + S +V RD    +S G  +V F +S DE  A RA
Sbjct: 307 NLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDH-QGQSKGSGFVAF-SSPDE--ATRA 362

Query: 414 LESLNFTPLNGKAIRIMWSHRDPSSR 491
           +  +N   +  K + +  + R    R
Sbjct: 363 VTEMNGKMVGNKPLYVALAQRKEERR 388


>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
          Length = 647

 Score =  170 bits (430), Expect = 7e-41
 Identities = 85/130 (65%), Positives = 104/130 (80%), Gaps = 3/130 (2%)
 Frame = +3

Query: 216 PAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNAS 386
           PAP    + S+YVGDL+ NV+EAQLY++FSQ GPV SIRVCRD ++RRSLGYAYVN++++
Sbjct: 16  PAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSA 75

Query: 387 ADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQF 566
            D   A RALE LNFTP+NGK IRIM+SHRDPS RKSG  N+F+K+L ++I NK LHD F
Sbjct: 76  QD---ATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTF 132

Query: 567 SPIGKILSCK 596
           S  G ILSCK
Sbjct: 133 SAFGGILSCK 142



 Score = 49.7 bits (117), Expect = 1e-04
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV +L  N  + +L  +F   GP++S  V RD+  + S  + +VNF  + D + AV A
Sbjct: 204 NVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGK-SKCFGFVNFELADDAAKAVEA 262

Query: 414 LESLNFTPLN---GKA---------IRIMWSHRDPSSRKSGLG-NLFVKSLHESIGNKEL 554
           L            G+A         +R  +     S  +   G NL++K+L +++ +++L
Sbjct: 263 LNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKL 322

Query: 555 HDQFSPIGKILSCK 596
            + F+  G I SCK
Sbjct: 323 RELFAEYGTITSCK 336



 Score = 36.6 bits (83), Expect = 1.3
 Identities = 23/86 (26%), Positives = 44/86 (51%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD  V + +L +LF++ G + S +V +D    +S G  +V F+   +   A RA
Sbjct: 307 NLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDP-QGQSRGSGFVAFSTPEE---ATRA 362

Query: 414 LESLNFTPLNGKAIRIMWSHRDPSSR 491
           +  +N   +  K + +  + R    R
Sbjct: 363 VTEMNTKMVGSKPLYVALAQRKEERR 388


>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
          Length = 645

 Score =  167 bits (423), Expect = 5e-40
 Identities = 87/133 (65%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
 Frame = +3

Query: 207 ASVPAP---TTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 377
           AS PAP    + SLYVGDL+S V+EAQLY++FSQVG V SIRVCRD ++RRSLGYAYVN+
Sbjct: 13  ASGPAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNY 72

Query: 378 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELH 557
           N + D   A RALE LNF  +NGK IRIM+SHRDPS RKSG  N+F+K+L +SI NK LH
Sbjct: 73  NNAQD---ATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALH 129

Query: 558 DQFSPIGKILSCK 596
           D F+  G ILSCK
Sbjct: 130 DTFAAFGTILSCK 142



 Score = 51.2 bits (121), Expect = 5e-05
 Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV +L  +  + +L  +F   GP++S  V RD+  + S  + +VNF  + D + AV A
Sbjct: 204 NVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGK-SKCFGFVNFEHADDAAKAVEA 262

Query: 414 LESLNFTPLN---GKA-----------IRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKE 551
           L    F       G+A            +     ++   +  G+ NL++K+L ++I +++
Sbjct: 263 LNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGV-NLYLKNLDDTIDDEK 321

Query: 552 LHDQFSPIGKILSCK 596
           L + FS  G I+SCK
Sbjct: 322 LREIFSEYGTIVSCK 336



 Score = 39.3 bits (90), Expect = 0.20
 Identities = 26/86 (30%), Positives = 46/86 (53%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD  + + +L ++FS+ G + S +V RD    +S G  +V F +S DE  A RA
Sbjct: 307 NLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDP-QGQSRGSGFVAF-SSPDE--ATRA 362

Query: 414 LESLNFTPLNGKAIRIMWSHRDPSSR 491
           +  +N   +  K + +  + R    R
Sbjct: 363 VTEMNGKMVGSKPLYVALAQRKEERR 388


>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
          Length = 650

 Score =  165 bits (417), Expect = 2e-39
 Identities = 85/133 (63%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = +3

Query: 207 ASVPAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 377
           A  P P    + SLYVGDL+ NV+EAQLY+LF+QVG V SIRVCRD ++RRSLGYAYVN+
Sbjct: 17  AGAPPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNY 76

Query: 378 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELH 557
           N++ D   A RALE LNF+ LNG  IRIM+SHRDPS RKSG  N+F+K+L ++I NK LH
Sbjct: 77  NSAQD---ATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALH 133

Query: 558 DQFSPIGKILSCK 596
           D FS  G ILSCK
Sbjct: 134 DTFSAFGGILSCK 146



 Score = 44.7 bits (104), Expect = 0.005
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV +L  N  E  L ++F   G ++S  V RDS   +S  + +VNF    + + AV A
Sbjct: 208 NVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDS-DGKSKCFGFVNFEHPDNAAKAVEA 266

Query: 414 LESLNFTPLN---GKA-----------IRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKE 551
           L            G+A            +     ++   +  G+ NL++K+L +++ +++
Sbjct: 267 LNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGV-NLYLKNLDDTVDDEK 325

Query: 552 LHDQFSPIGKILSCK 596
           L + F+  G I SCK
Sbjct: 326 LRELFADYGTITSCK 340



 Score = 37.7 bits (86), Expect = 0.58
 Identities = 24/86 (27%), Positives = 44/86 (51%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD  V + +L +LF+  G + S +V RD    +S G  +V F++  +   A RA
Sbjct: 311 NLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDP-QGQSRGSGFVAFSSPEE---ATRA 366

Query: 414 LESLNFTPLNGKAIRIMWSHRDPSSR 491
           +  +N   +  K + +  + R    R
Sbjct: 367 VTEMNGKMVGSKPLYVALAQRKEERR 392


>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
           chr18 scaffold_1, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
          Length = 640

 Score =  165 bits (417), Expect = 2e-39
 Identities = 85/136 (62%), Positives = 100/136 (73%), Gaps = 4/136 (2%)
 Frame = +3

Query: 201 VMASVPAPT----TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAY 368
           + A+V  P     TASLYVGDLD N+ ++QLYDLF Q G V S+RVCRD  +RRSLGY Y
Sbjct: 4   IQAAVAGPNGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGY 63

Query: 369 VNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNK 548
           VN++   D   A RAL+ LNFTPLNGK IRIM+SHRDPS RKSG  N+F+K+L +SI NK
Sbjct: 64  VNYSNPQD---AARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNK 120

Query: 549 ELHDQFSPIGKILSCK 596
            LHD FS  G ILSCK
Sbjct: 121 ALHDTFSAFGNILSCK 136



 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           ++YV +L  +  E  L ++F + G + S+ V RD    +S  + +VNF  + D + AV A
Sbjct: 198 NVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDG-DGKSKCFGFVNFENADDAAEAVEA 256

Query: 414 LESLNFTPLN---GKAI-----------RIMWSHRDPSSRKSGLGNLFVKSLHESIGNKE 551
           L    F       GKA            R   S ++   +  G+ NL++K+L +SIG+ +
Sbjct: 257 LNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGV-NLYIKNLDDSIGDDK 315

Query: 552 LHDQFSPIGKILSCK 596
           L + FS  G I SCK
Sbjct: 316 LKELFSEFGTITSCK 330



 Score = 42.0 bits (97), Expect = 0.031
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD ++ + +L +LFS+ G + S +V RD  S  S G  +V F+ S + S A+  
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-SGISRGSGFVAFSTSEEASRAL-- 357

Query: 414 LESLNFTPLNGKAI 455
                 T +NGK +
Sbjct: 358 ------TEMNGKMV 365


>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
           PE=2 SV=1
          Length = 649

 Score =  164 bits (415), Expect = 4e-39
 Identities = 81/123 (65%), Positives = 96/123 (78%)
 Frame = +3

Query: 228 TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAV 407
           T SLYVGDLD NV ++QLYDLF+QVG V S+RVCRD  SRRSLGY YVN++   D S   
Sbjct: 28  TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDAS--- 84

Query: 408 RALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKELHDQFSPIGKIL 587
           RAL+ LNFTPLNG  IR+M+SHRDPS RKSG GN+F+K+L ++I +K LHD FS  G IL
Sbjct: 85  RALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSIL 144

Query: 588 SCK 596
           SCK
Sbjct: 145 SCK 147



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +++V +L    +E  L ++F + GP+ S+ V RD   + S  + +VNF  + D   A R+
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK-SKCFGFVNFENADD---AARS 264

Query: 414 LESLNFTPLNGKA-----------------IRIMWSHRDPSSRKSGLGNLFVKSLHESIG 542
           +E+LN   ++GK                   R   S ++ + +  G  NL+VK+L +SI 
Sbjct: 265 VEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQG-ANLYVKNLDDSID 323

Query: 543 NKELHDQFSPIGKILSCK 596
           + +L + F+  G I SCK
Sbjct: 324 DDKLKELFTGFGTITSCK 341



 Score = 37.7 bits (86), Expect = 0.58
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +3

Query: 231 ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRD--SVSRRSLGYAYVNFNASADESAA 404
           A+LYV +LD ++ + +L +LF+  G + S +V RD   +SR S       F A +    A
Sbjct: 311 ANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGS------GFVAFSSPEEA 364

Query: 405 VRALESLNFTPLNGKAIRIMWSHR 476
            RAL  +N   +  K + +  + R
Sbjct: 365 ARALAEMNGRMIVSKPLYVALAQR 388


>tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea mays
           PE=2 SV=1
          Length = 660

 Score =  164 bits (414), Expect = 5e-39
 Identities = 84/135 (62%), Positives = 102/135 (75%)
 Frame = +3

Query: 192 GGGVMASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYV 371
           G G+  + P PTT SLYVGDL+ +V+++QLY+LFSQ G V S+RVCRD  SRRSLGYAYV
Sbjct: 28  GVGLGVAQPLPTT-SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYV 86

Query: 372 NFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHESIGNKE 551
           NFN   D   A RALE LNF PLN K IR+M+S+RDPSSR+SG  N+F+K+L + I NK 
Sbjct: 87  NFNNPLD---AARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKS 143

Query: 552 LHDQFSPIGKILSCK 596
           LH+ FS  G ILSCK
Sbjct: 144 LHETFSSFGTILSCK 158



 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +++V +L  +  +  L  +F + G + S  V    +  +S  + ++NF    +  AA RA
Sbjct: 220 NVFVKNLSESTTKEDLLKIFGEYGNITSA-VVMIGMDGKSRCFGFINFE---NPDAASRA 275

Query: 414 LESLNFTPLNGKAIRIMWSHR-----------------DPSSRKSGLGNLFVKSLHESIG 542
           ++ LN   +N K   +  + +                 D + +  GL NL++K+L +SIG
Sbjct: 276 VQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGL-NLYLKNLDDSIG 334

Query: 543 NKELHDQFSPIGKILSCK 596
           + +L + FS  GKI SCK
Sbjct: 335 DDQLRELFSNFGKITSCK 352



 Score = 42.7 bits (99), Expect = 0.018
 Identities = 25/81 (30%), Positives = 46/81 (56%)
 Frame = +3

Query: 234 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 413
           +LY+ +LD ++ + QL +LFS  G + S +V RD  +  S G  +V F+   + S   +A
Sbjct: 323 NLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQ-NGLSKGSGFVAFSTREEAS---QA 378

Query: 414 LESLNFTPLNGKAIRIMWSHR 476
           L  +N   ++GK + + ++ R
Sbjct: 379 LTEMNGKMISGKPLYVAFAQR 399


>tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subsp.
           japonica GN=P0451H06.101 PE=2 SV=1
          Length = 660

 Score =  163 bits (413), Expect = 7e-39
 Identities = 86/141 (60%), Positives = 103/141 (73%)
 Frame = +3

Query: 174 APGNWRGGGVMASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRS 353
           A G    G   A+       SLYVGDLD +V +AQL+D+FSQVG V S+RVCRD  +R S
Sbjct: 20  ANGVVAAGSAAAAAATFQATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLS 79

Query: 354 LGYAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVKSLHE 533
           LGYAYVNF++ AD   A RALE LNFTP+NGK IRIM+S+RDPSSRKSG  N+F+K+L +
Sbjct: 80  LGYAYVNFSSPAD---AARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDK 136

Query: 534 SIGNKELHDQFSPIGKILSCK 596
           SI NK L+D FS  G ILSCK
Sbjct: 137 SIDNKALYDTFSVFGNILSCK 157



 Score = 48.1 bits (113), Expect = 4e-04
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
 Frame = +3

Query: 222 PTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESA 401
           P   ++YV +L  +  E  L ++F + GP+ S+ V R+    +S  + +VNF    D   
Sbjct: 215 PKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDD--- 270

Query: 402 AVRALESLNFTPLNGKAIRIMWSHR----------------DPSSRKSGLGNLFVKSLHE 533
           A RA+E LN    + K   +  + +                  ++ K+   NL++K+L +
Sbjct: 271 AARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDD 330

Query: 534 SIGNKE-LHDQFSPIGKILSCK 596
           SI + E L + F+  G I SCK
Sbjct: 331 SIDDDEKLKEIFADFGTITSCK 352