DK956759 |
Clone id |
TST39A01NGRL0026_J07 |
Library |
TST39 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_J07. 5' end sequence. |
Accession |
DK956759 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL149Contig1 |
Sequence |
GTCTCGTCTGTCTGTGTCTGTGCATTGAGGTCTACTCTGTCCGTCGAACTGCTCCGTGGA CTCCGCTGTAAAGACTCCATACCGCGTTGCTCTGTGTGTGTGTGTGTGTGTGTGTGGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCCCTTTGTATCATGGCCCCCCAAAT TCTGTTGCAGCAGTTGGCTTCTGGCGTTGGTGTTCTTGCAGGAGCCTTCATGGTCAAGTC TTTACTTGATTCACAGAACAACAGCCATGTCTCCTCTGCGTTTCCTCGGTGTCCCACCTG CAATGGAACAAGGAGAGTCCCTTGCCTTTGCAACCGCTGGTCCGATGGGGATGTGGGATG TCGCTCTTGCGGGGGTACGGGCATGAGTGTGTGCAACAGCTGTGGCGGATCCGGCACCGG CAGGCCTCTTCCTGTAAGCATTCGACCCTCTTCGGTTCCTCGCAGTTCACAAAGCCCCCC ATCATGAGACAGGTACGCTCATTACAACAATCCTTTTCCCAAGAGGGAAAGGCAATTGTG AGGAACTTAAGTTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P35191 |
Definition |
sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae |
Align length |
71 |
Score (bit) |
35.4 |
E-value |
0.19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956759|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_J07, 5' (556 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomy... 35 0.19 sp|A5IIT4|DNAJ_THEP1 Chaperone protein dnaJ OS=Thermotoga petrop... 35 0.25 sp|Q80WJ1|GGN_MOUSE Gametogenetin OS=Mus musculus GN=Ggn PE=1 SV=2 35 0.32 sp|Q9WZV3|DNAJ_THEMA Chaperone protein dnaJ OS=Thermotoga mariti... 35 0.32 sp|Q01279|EGFR_MOUSE Epidermal growth factor receptor OS=Mus mus... 34 0.55 sp|O27352|DNAJ_METTH Chaperone protein dnaJ OS=Methanobacterium ... 34 0.55 sp|Q66HC8|GGN_RAT Gametogenetin OS=Rattus norvegicus GN=Ggn PE=2... 33 0.72 sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sa... 33 0.72 sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS... 33 0.94 sp|P87239|MDJ1_SCHPO DnaJ homolog 1, mitochondrial OS=Schizosacc... 33 1.2 sp|Q182E7|DNAJ_CLOD6 Chaperone protein dnaJ OS=Clostridium diffi... 33 1.2 sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog OS... 33 1.2 sp|P53940|YNH7_YEAST Uncharacterized J domain-containing protein... 32 1.6 sp|Q7UA76|DNAJ_SYNPX Chaperone protein dnaJ OS=Synechococcus sp.... 32 1.6 sp|Q52702|DNAJ_RHOCA Chaperone protein dnaJ OS=Rhodobacter capsu... 32 1.6 sp|P20730|CHHB2_BOMMO Chorion class high-cysteine HCB protein 13... 32 1.6 sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanoc... 32 2.1 sp|P26372|KRUC_SHEEP Keratin, ultra high-sulfur matrix protein O... 32 2.1 sp|Q6L8G5|KR510_HUMAN Keratin-associated protein 5-10 OS=Homo sa... 32 2.1 sp|Q114R3|DNAJ_TRIEI Chaperone protein dnaJ OS=Trichodesmium ery... 32 2.1 sp|A2SIR5|DNAJ_METPP Chaperone protein dnaJ OS=Methylibium petro... 32 2.1 sp|A1BHL1|DNAJ_CHLPD Chaperone protein dnaJ OS=Chlorobium phaeob... 32 2.1 sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sa... 32 2.1 sp|Q4V896|SNX15_RAT Sorting nexin-15 OS=Rattus norvegicus GN=Snx... 32 2.7 sp|Q9D226|KRA53_MOUSE Keratin-associated protein 5-3 OS=Mus musc... 32 2.7 sp|Q701N4|KRA52_HUMAN Keratin-associated protein 5-2 OS=Homo sap... 32 2.7 sp|Q9BYP8|KR171_HUMAN Keratin-associated protein 17-1 OS=Homo sa... 32 2.7 sp|Q1LJ82|DNAJ_RALME Chaperone protein dnaJ OS=Ralstonia metalli... 32 2.7 sp|Q8TQR1|DNAJ_METAC Chaperone protein dnaJ OS=Methanosarcina ac... 32 2.7 sp|A1K4C4|DNAJ_AZOSB Chaperone protein dnaJ OS=Azoarcus sp. (str... 32 2.7
>sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae GN=MDJ1 PE=1 SV=1 Length = 511
Score = 35.4 bits (80), Expect = 0.19 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Frame = +2
Query: 239 SLLDSQNNSHVSSAFPRCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTG-----------M 385 ++ S+N SA C TC+GT P + V C +C GTG M Sbjct: 213 AVFGSKNVQLRFSALDPCSTCSGTGMKP------NTHKVSCSTCHGTGTTVHIRGGFQMM 266
Query: 386 SVCNSCGGSGT 418 S C +C G GT Sbjct: 267 STCPTCNGEGT 277
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1 Length = 369
Score = 35.0 bits (79), Expect = 0.25 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +2
Query: 272 SSAFPRCPTCNGTRRVPCLCNRWSDGDVG---CRSCGGTGM---SVCNSCGGSG 415 ++ + CP+C GT R+ + V C CGGTG C+ CGGSG Sbjct: 167 NAGYINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 34.3 bits (77), Expect = 0.42 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Frame = +2
Query: 239 SLLDSQNNSHVSSAFPR---CPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGM-------- 385 +L D N + + + R CP C GT P + G + C SCGGTG Sbjct: 136 TLSDLINGAEIPVEYERYETCPRCGGTGVEP------NAGYINCPSCGGTGRIREERRSF 189
Query: 386 -------SVCNSCGGSG 415 C CGG+G Sbjct: 190 FGYFVSERTCERCGGTG 206
>sp|Q80WJ1|GGN_MOUSE Gametogenetin OS=Mus musculus GN=Ggn PE=1 SV=2 Length = 673
Score = 34.7 bits (78), Expect = 0.32 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = -2
Query: 408 PPQLLHTLMPVPPQERHPTSPSDQRLQRQGTLLVPLQVGHRGNAEETWLLFCE------S 247 PP + TL+P P + R PT S R++ L+ HRG + L + Sbjct: 99 PPPPVGTLLPAPSKWRKPTGTSVPRIRGL------LEASHRGQGDPPSLRPLPPLPRQLT 152
Query: 246 SKDLTMKAPARTPTP 202 KD ++APA PTP Sbjct: 153 EKDPVLRAPAPPPTP 167
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1 Length = 369
Score = 34.7 bits (78), Expect = 0.32 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +2
Query: 272 SSAFPRCPTCNGTRRVPCLCNRWSDGDVG---CRSCGGTGM---SVCNSCGGSG 415 ++ + CP+C GT R+ + V C CGGTG C+ CGGSG Sbjct: 167 NAGYMDCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 33.1 bits (74), Expect = 0.94 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Frame = +2
Query: 239 SLLDSQNNSHVSSAFPR---CPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGM-------- 385 +L D N + + + R CP C GT P + G + C SCGGTG Sbjct: 136 TLSDLINGAEIPVEYERYETCPRCGGTGVEP------NAGYMDCPSCGGTGRIREERRSF 189
Query: 386 -------SVCNSCGGSG 415 C CGG+G Sbjct: 190 FGYFVSERTCERCGGTG 206
>sp|Q01279|EGFR_MOUSE Epidermal growth factor receptor OS=Mus musculus GN=Egfr PE=1 SV=1 Length = 1210
Score = 33.9 bits (76), Expect = 0.55 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = -3
Query: 479 GGFVNCEEPKRVECLQEEACRCRIR------HSCCTHSCPYPRKSD 360 GG NC++ ++ C Q+ + RCR R H+ C C PR+SD Sbjct: 202 GGEENCQKLTKIICAQQCSHRCRGRSPSDCCHNQCAAGCTGPRESD 247
>sp|O27352|DNAJ_METTH Chaperone protein dnaJ OS=Methanobacterium thermoautotrophicum GN=dnaJ PE=3 SV=1 Length = 376
Score = 33.9 bits (76), Expect = 0.55 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Frame = +2
Query: 239 SLLDSQNNSHVSSAFP---RCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSVCNSCGG 409 SL D+ N P +CP C+G+R P GTG C +CGG Sbjct: 128 SLEDAYNGLETDIRVPHTKKCPVCHGSRAEP-----------------GTGTRTCQTCGG 170
Query: 410 SG 415 SG Sbjct: 171 SG 172
>sp|Q66HC8|GGN_RAT Gametogenetin OS=Rattus norvegicus GN=Ggn PE=2 SV=1 Length = 658
Score = 33.5 bits (75), Expect = 0.72 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = -2
Query: 408 PPQLLHTLMPVPPQERHPTSPSDQRLQRQGTLLVPLQVGHRGNAEETWLLFCE------S 247 PP + TL+P P + R PT + R++ L+ HRG + L + Sbjct: 101 PPPPVGTLLPAPSKWRKPTGTAVPRIRGL------LEASHRGQGDPPSLRPLPPLPRQLT 154
Query: 246 SKDLTMKAPARTPTP 202 KD ++APA PTP Sbjct: 155 EKDPVLRAPAPPPTP 169
>sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sapiens GN=C3orf32 PE=2 SV=1 Length = 353
Score = 33.5 bits (75), Expect = 0.72 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2
Query: 287 RCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSVCNSCGGSG 415 RCP+C G +R R C+ C G+G C++C G G Sbjct: 176 RCPSCCGAKRKAKQSRR-------CQLCAGSGRRRCSTCSGRG 211
>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2 Length = 408
Score = 33.1 bits (74), Expect = 0.94 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2
Query: 275 SAFPRCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSV---CNSCGGSG 415 +A CPTC G RV C++C GTG + C SC GSG Sbjct: 198 AAMSICPTCRGVGRVTI-----PPFTASCQTCKGTGHIIKEYCMSCRGSG 242
>sp|P87239|MDJ1_SCHPO DnaJ homolog 1, mitochondrial OS=Schizosaccharomyces pombe GN=mdj1 PE=2 SV=1 Length = 528
Score = 32.7 bits (73), Expect = 1.2 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Frame = +2
Query: 254 QNNSHVSSAFPRCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGM-----SVCNSCGGSGT 418 Q SH S+ F C GT + C SCGGTG S C SC GSGT Sbjct: 249 QPGSHKSTCF----ACKGTGQRLHFIPPSFHMQTTCDSCGGTGTTIPPNSACRSCMGSGT 304
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NK57 |
Definition |
tr|A9NK57|A9NK57_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
90 |
Score (bit) |
117.0 |
E-value |
5.0e-25 |
Report |
|