| DK956768 |
| Clone id |
TST39A01NGRL0026_J16 |
| Library |
TST39 |
| Length |
540 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_J16. 5' end sequence. |
| Accession |
DK956768 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL2061Contig1 |
| Sequence |
CTACTATCGTGGTGCTGTTGGAGCGCTTGTTGTGTACGACATCAGCAGGCGTCAATCTTT TGATGACATTGGTCGCTGGTTGGAAGAACTTCGAGTCCACTCAGATATGAGCGTAGTTGC AATGCTGGTGGGTAACAAGTGCGATCTTGAACACTTGAGAGAGGTCTCACAAGAGGAGGG GCGGTCTCTTGCGGAATCTGAGGGCATGTACTTCATGGAAACTTCTGCTTTGGATTCGAC AAATGTCCACAAAGCCTTTCAAACTGTTGTGACAGAGATCTACAATGTCGTCAGCAGAAA GGTGCTCGCTGCCAATTTGAGAAAATCAACCCCTAGTTTTGGCGGCACGAAGGTTGTGGC ATTGCAATATGACTGTGAAGCTGACGCTAGCGTGGCGAAACCAGCAAAGTCTAGGTGTTG TTTTGGTTAAATATGATAGGTTTACAAGTGTTTTTGAGAAGTATGATACTATTTCTTGAC ATCCATGTACACACTGTATTCTTTTATTTGTTAGTTTGTGAAAAAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q40723 |
| Definition |
sp|Q40723|RGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica |
| Align length |
142 |
| Score (bit) |
151.0 |
| E-value |
2.0e-36 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9SPK2 |
| Definition |
tr|Q9SPK2|Q9SPK2_GOSHI Rab GTP-binding protein Rab11a OS=Gossypium hirsutum |
| Align length |
141 |
| Score (bit) |
164.0 |
| E-value |
2.0e-39 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956768|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_J16, 5' (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SPK2|Q9SPK2_GOSHI Rab GTP-binding protein Rab11a OS=Gossypi... 164 2e-39 tr|Q9SPK1|Q9SPK1_GOSHI Rab GTP-binding protein Rab11b OS=Gossypi... 164 2e-39 tr|Q41654|Q41654_VICFA Guanine nucleotide regulatory protein OS=... 162 1e-38 tr|B7FIA6|B7FIA6_MEDTR Putative uncharacterized protein OS=Medic... 158 2e-37 tr|Q40200|Q40200_LOTJA RAB11J OS=Lotus japonicus GN=rab11J PE=2 ... 157 2e-37 tr|Q8LHP5|Q8LHP5_ORYSJ Os07g0634200 protein OS=Oryza sativa subs... 157 3e-37 tr|B8B4Y5|B8B4Y5_ORYSI Putative uncharacterized protein OS=Oryza... 157 3e-37 tr|A9NML2|A9NML2_PICSI Putative uncharacterized protein OS=Picea... 157 4e-37 tr|A5C9K9|A5C9K9_VITVI Putative uncharacterized protein (Chromos... 156 5e-37 tr|Q40524|Q40524_TOBAC Nt-Rab11e protein (Fragment) OS=Nicotiana... 156 7e-37 tr|Q9FGK5|Q9FGK5_ARATH GTP-binding protein-like (At5g47520) OS=A... 155 9e-37 tr|B4FEP4|B4FEP4_MAIZE Putative uncharacterized protein OS=Zea m... 155 9e-37 tr|A3BMJ5|A3BMJ5_ORYSJ Putative uncharacterized protein OS=Oryza... 155 9e-37 tr|Q39860|Q39860_SOYBN GTPase OS=Glycine max GN=gmr2 PE=3 SV=1 155 1e-36 tr|Q40197|Q40197_LOTJA RAB11G OS=Lotus japonicus GN=rab11G PE=2 ... 154 3e-36 tr|Q39859|Q39859_SOYBN GTP binding protein (Fragment) OS=Glycine... 153 4e-36 tr|A9RGH1|A9RGH1_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 153 4e-36 tr|A9TNK9|A9TNK9_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 153 6e-36 tr|Q84QW0|Q84QW0_ORYSJ Os08g0525000 protein OS=Oryza sativa subs... 152 1e-35 tr|A5B3S9|A5B3S9_VITVI Putative uncharacterized protein (Chromos... 152 1e-35 tr|Q2A9Y1|Q2A9Y1_BRAOL Ras-related GTP-binding protein, putative... 151 2e-35 tr|B8B8V3|B8B8V3_ORYSI Putative uncharacterized protein OS=Oryza... 151 2e-35 tr|Q2A9T3|Q2A9T3_BRAOL Ras family GTP-binding protein OS=Brassic... 151 2e-35 tr|Q0DJH2|Q0DJH2_ORYSJ Os05g0280200 protein OS=Oryza sativa subs... 151 2e-35 tr|B4FLV9|B4FLV9_MAIZE Putative uncharacterized protein OS=Zea m... 151 2e-35 tr|A2Y2Q3|A2Y2Q3_ORYSI Putative uncharacterized protein OS=Oryza... 151 2e-35 tr|Q08145|Q08145_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 150 3e-35 tr|Q84QC3|Q84QC3_ARATH Putative RAS-related protein ARA-1 OS=Ara... 150 4e-35 tr|A5AR55|A5AR55_VITVI Putative uncharacterized protein (Chromos... 150 5e-35 tr|Q9SIP0|Q9SIP0_ARATH Putative RAS superfamily GTP-binding prot... 149 6e-35
>tr|Q9SPK2|Q9SPK2_GOSHI Rab GTP-binding protein Rab11a OS=Gossypium hirsutum PE=2 SV=1 Length = 224
Score = 164 bits (416), Expect = 2e-39 Identities = 85/141 (60%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRRQ+FD IGRWL EL+ HSDM+VV +LVGNK DL REVS EG Sbjct: 83 YYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDLRDAREVSTAEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAAN-LRKSTPSFGGTKVV 358 ++LAE++G++FMETSALDS+NV AFQTVV EIYN++SRKV+ ++ L+K G K V Sbjct: 143 KALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKKQDAPLDG-KTV 201
Query: 359 ALQYDCEADASVAKPAKSRCC 421 LQ D + + P CC Sbjct: 202 VLQGDENQERATESPKSGGCC 222
>tr|Q9SPK1|Q9SPK1_GOSHI Rab GTP-binding protein Rab11b OS=Gossypium hirsutum PE=2 SV=1 Length = 224
Score = 164 bits (416), Expect = 2e-39 Identities = 85/141 (60%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRRQ+FD IGRWL EL+ HSDM+VV +LVGNK DL REVS EG Sbjct: 83 YYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDLRDAREVSTAEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAAN-LRKSTPSFGGTKVV 358 ++LAE++G++FMETSALDS+NV AFQTVV EIYN++SRKV+ ++ L+K G K V Sbjct: 143 KALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKKQDAPLDG-KTV 201
Query: 359 ALQYDCEADASVAKPAKSRCC 421 LQ D + + P CC Sbjct: 202 VLQGDENQERATESPKSGGCC 222
>tr|Q41654|Q41654_VICFA Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1 Length = 223
Score = 162 bits (409), Expect = 1e-38 Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 2/142 (1%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRRQ+FD IGRWL EL HSDM+VV +LVGNK DL+ REV EG Sbjct: 83 YYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVPTPEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAAN--LRKSTPSFGGTKV 355 ++LAE++G++FMETSALDS+NV AFQTVV EIYN++SRKV+ + ++ TP K Sbjct: 143 KALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKKQDTPWTENGKT 202
Query: 356 VALQYDCEADASVAKPAKSRCC 421 V LQ E D V +K CC Sbjct: 203 VVLQ---EGDREVEVESKKGCC 221
>tr|B7FIA6|B7FIA6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 220
Score = 158 bits (399), Expect = 2e-37 Identities = 77/119 (64%), Positives = 96/119 (80%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRR +FD +GRWL+EL+ H D +V MLVGNKCDL+++R+VS EEG Sbjct: 84 YYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLDNIRDVSIEEG 143
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRKSTPSFGGTKVV 358 +SLAESEG++FMETSALDSTNV AF+ V+ EIYN VSRKVL ++ K+ S +V Sbjct: 144 KSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAELSVNRVSLV 202
>tr|Q40200|Q40200_LOTJA RAB11J OS=Lotus japonicus GN=rab11J PE=2 SV=1 Length = 223
Score = 157 bits (398), Expect = 2e-37 Identities = 84/143 (58%), Positives = 104/143 (72%), Gaps = 3/143 (2%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGALVVYDISRRQ+FD IGRWL EL HSDM+VV +LVGNK DL+ REV+ EG Sbjct: 83 YYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAAN--LRKSTPSFGGTKV 355 ++LAE++G++FMETSALDS+NV AFQTVV EIYN++SRKV+ + + P K Sbjct: 143 KALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELTKHEVPRIENGKS 202
Query: 356 VALQ-YDCEADASVAKPAKSRCC 421 V +Q + EAD +K CC Sbjct: 203 VVIQGENLEADGQ----SKKGCC 221
>tr|Q8LHP5|Q8LHP5_ORYSJ Os07g0634200 protein OS=Oryza sativa subsp. japonica GN=P0455H11.113 PE=2 SV=1 Length = 220
Score = 157 bits (397), Expect = 3e-37 Identities = 80/122 (65%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRRQ+FD +GRWL EL HSDM+VV +LVGNK DL+H REVS EG Sbjct: 83 YYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVSTAEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRK-STPSFGGTKVV 358 ++LAES+G++FMETSALDS+NV +AFQTVV EIY ++SRKV + +K S S K V Sbjct: 143 KALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVFQSQEQKRSEQSLSNGKPV 202
Query: 359 AL 364 L Sbjct: 203 ML 204
>tr|B8B4Y5|B8B4Y5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26999 PE=4 SV=1 Length = 220
Score = 157 bits (397), Expect = 3e-37 Identities = 80/122 (65%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRRQ+FD +GRWL EL HSDM+VV +LVGNK DL+H REVS EG Sbjct: 83 YYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVSTAEG 142
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRK-STPSFGGTKVV 358 ++LAES+G++FMETSALDS+NV +AFQTVV EIY ++SRKV + +K S S K V Sbjct: 143 KALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVFQSQEQKRSEQSLSNGKPV 202
Query: 359 AL 364 L Sbjct: 203 ML 204
>tr|A9NML2|A9NML2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 210
Score = 157 bits (396), Expect = 4e-37 Identities = 81/140 (57%), Positives = 101/140 (72%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGAL+VYDISRR +FD++ RWLEEL++H+D +VV MLVGNK DLEH+REV E+G Sbjct: 79 YYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDLEHIREVPVEDG 138
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRKSTPSFGGTKVVA 361 R LAESEG++F+ETSALD+TNV AFQ VV EIYN VS+K+L ++ KS S K++ Sbjct: 139 RKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSYKSELSLNRVKIM- 197
Query: 362 LQYDCEADASVAKPAKSRCC 421 D K CC Sbjct: 198 -------DGEDPPKTKYSCC 210
>tr|A5C9K9|A5C9K9_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_67, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00033520001 PE=3 SV=1 Length = 215
Score = 156 bits (395), Expect = 5e-37 Identities = 83/142 (58%), Positives = 105/142 (73%), Gaps = 2/142 (1%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGAVGALVVYDISRR +FD + RWL+EL+ HS+ +V MLVGNK DLE++R+VS EEG Sbjct: 79 YYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDLENIRDVSVEEG 138
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRKSTPSFGGTKVVA 361 +SLAE+EG++F+ETSALDSTNV KAF+ V+ EIYN +SRKVL ++ K+ S +V+ Sbjct: 139 KSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSDSYKAELSVNRVSLVS 198
Query: 362 LQYDCEADASVAKPAKSR--CC 421 A AK A SR CC Sbjct: 199 ------NGADGAKQANSRYSCC 214
>tr|Q40524|Q40524_TOBAC Nt-Rab11e protein (Fragment) OS=Nicotiana tabacum GN=Nt-Rab11e PE=2 SV=1 Length = 209
Score = 156 bits (394), Expect = 7e-37 Identities = 78/119 (65%), Positives = 95/119 (79%) Frame = +2
Query: 2 YYRGAVGALVVYDISRRQSFDDIGRWLEELRVHSDMSVVAMLVGNKCDLEHLREVSQEEG 181 YYRGA GALVVYDI+RR +FD I RWL+EL+ HSD +V MLVGNKCDL+++R VS EEG Sbjct: 73 YYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDLDNIRAVSVEEG 132
Query: 182 RSLAESEGMYFMETSALDSTNVHKAFQTVVTEIYNVVSRKVLAANLRKSTPSFGGTKVV 358 +SLAESEGM+FMETSALD+TNV+KAF V+ EIYN VSRKVL ++ K+ S +V Sbjct: 133 KSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKAELSVNRVSLV 191
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