| DK956807 |
| Clone id |
TST39A01NGRL0026_L08 |
| Library |
TST39 |
| Length |
558 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_L08. 5' end sequence. |
| Accession |
DK956807 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL3007Contig1 |
| Sequence |
AATAGCTATACTTATCTTGTTGCAAGCAACTAATTAGATAGCCGGGTCGAATCATGAGCG GACGGAGTAACTATACTGCCTTTCCATATGGCGCTGGCATTAAGTCTAGGTGGCCAGATC ACGGCCCCCCGCCGTATTACACCCCTCCAGAAGATCTTTTTTCTTTTCCTCCTCCACACA GTACTGAGGCATCATGGGTGGCGGAAGCTACTGAGAATTTCGGCCGGCCGGCCACGCAGC TCGCCAAGGCCGAGGTGAATTCCGTTTTCTGCAAAATAGTCGGAACAGAATCTTCCTCCG CGGTTCTGGAGGAGATTCCCGGTGTAGGGCTGCTGGTGGCGGCTGTGTACTACAGCGCCG AACAGCAGCAAAGTAAACATGGTACGTCCTCGGCGGATCACAACTCCACATTTGCCACCA ATGTGAGGGCTATCTTAGCTCTCCTTGGTGACGGGGTGGCCTTCTGCTTAATGCAGTTGG GCAGTGCCCGAAAGGCGGCCATAAGCAAGCTCGGCCGCCAGCTTGGCCTGCTACTGCAAA TGGCCATCTTCAACTACT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q32KG4 |
| Definition |
sp|Q32KG4|RGAG1_MOUSE Retrotransposon gag domain-containing protein 1 OS=Mus musculus |
| Align length |
71 |
| Score (bit) |
33.5 |
| E-value |
0.72 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q8S5M5 |
| Definition |
tr|Q8S5M5|Q8S5M5_ORYSJ Putative PPR-repeat protein (Pentatricopeptide, putative, expressed) (Putative uncharacterized protein OSJNBa0083M08.2) OS=Oryza sativa subsp. japonica |
| Align length |
88 |
| Score (bit) |
39.3 |
| E-value |
0.15 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956807|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_L08, 5' (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8S5M5|Q8S5M5_ORYSJ Putative PPR-repeat protein (Pentatricope... 39 0.15 tr|A3C429|A3C429_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.15 tr|Q2TY63|Q2TY63_ASPOR Predicted protein OS=Aspergillus oryzae G... 38 0.42 tr|Q5QLW4|Q5QLW4_ORYSJ Putative uncharacterized protein B1168H06... 32 1.5 tr|B6PNZ3|B6PNZ3_BRAFL Putative uncharacterized protein OS=Branc... 35 2.1 tr|B6LTC8|B6LTC8_BRAFL Putative uncharacterized protein OS=Branc... 35 2.1 tr|B0W4G6|B0W4G6_CULQU Putative uncharacterized protein OS=Culex... 34 4.6 tr|Q8H5A6|Q8H5A6_ORYSJ Putative uncharacterized protein OJ1634_B... 34 4.7 tr|Q84T11|Q84T11_ORYSJ Putative uncharacterized protein OSJNBa00... 34 4.7 tr|Q10BX5|Q10BX5_ORYSJ Os03g0801900 protein OS=Oryza sativa subs... 34 4.7 tr|Q0CQ88|Q0CQ88_ASPTN Putative uncharacterized protein OS=Asper... 34 4.7 tr|O00816|O00816_TOXGO Micronemal protein MIC2 OS=Toxoplasma gon... 34 6.1 tr|B6KIP6|B6KIP6_TOXGO Microneme protein 2 OS=Toxoplasma gondii ... 34 6.1 tr|Q6ZD75|Q6ZD75_ORYSJ Putative uncharacterized protein P0450B04... 34 6.2 tr|A2AH48|A2AH48_MOUSE Retrotransposon gag domain containing 1 O... 33 7.9 tr|Q83456|Q83456_ADEP3 Putative 13.1 kDa E3 protein OS=Porcine a... 33 8.1 tr|Q8VPN4|Q8VPN4_9MICC Putative proline-rich extensin-like prote... 33 8.1 tr|Q48926|Q48926_MYCBO Fatty acid synthase OS=Mycobacterium bovi... 33 8.1 tr|Q8LI16|Q8LI16_ORYSJ Putative uncharacterized protein OJ1199_H... 33 8.1 tr|Q5W6P6|Q5W6P6_ORYSJ Putative polyprotein OS=Oryza sativa subs... 33 8.1 tr|Q0D563|Q0D563_ORYSJ Os07g0578800 protein OS=Oryza sativa subs... 33 8.1 tr|B8ALU1|B8ALU1_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.1 tr|A3BLI2|A3BLI2_ORYSJ Putative uncharacterized protein OS=Oryza... 33 8.1
>tr|Q8S5M5|Q8S5M5_ORYSJ Putative PPR-repeat protein (Pentatricopeptide, putative, expressed) (Putative uncharacterized protein OSJNBa0083M08.2) OS=Oryza sativa subsp. japonica GN=OJ1003C07.14 PE=4 SV=1 Length = 913
Score = 39.3 bits (90), Expect = 0.15 Identities = 26/88 (29%), Positives = 35/88 (39%) Frame = -1
Query: 450 HQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAALHRESPPEPRRKILFRLFC 271 HQ E WW P H+ FAA P LH +P P +L Sbjct: 800 HQNEF-----WWSHRITASPMGGHI-FAAPSPSPDYSPETPLHIPTPVIPLEFLLIGTLA 853
Query: 270 RKRNSPRPWRAAWPAGRNSQ*LPPPMMP 187 +R +P + AAW +G +S P P+ P Sbjct: 854 ARRGAPPFYMAAWGSGESSAPPPTPLFP 881
>tr|A3C429|A3C429_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030051 PE=4 SV=1 Length = 832
Score = 39.3 bits (90), Expect = 0.15 Identities = 26/88 (29%), Positives = 35/88 (39%) Frame = -1
Query: 450 HQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAALHRESPPEPRRKILFRLFC 271 HQ E WW P H+ FAA P LH +P P +L Sbjct: 719 HQNEF-----WWSHRITASPMGGHI-FAAPSPSPDYSPETPLHIPTPVIPLEFLLIGTLA 772
Query: 270 RKRNSPRPWRAAWPAGRNSQ*LPPPMMP 187 +R +P + AAW +G +S P P+ P Sbjct: 773 ARRGAPPFYMAAWGSGESSAPPPTPLFP 800
>tr|Q2TY63|Q2TY63_ASPOR Predicted protein OS=Aspergillus oryzae GN=AO090103000377 PE=4 SV=1 Length = 298
Score = 37.7 bits (86), Expect = 0.42 Identities = 27/89 (30%), Positives = 45/89 (50%) Frame = +3
Query: 174 PHSTEASWVAEATENFGRPATQLAKAEVNSVFCKIVGTESSSAVLEEIPGVGLLVAAVYY 353 P++T+ W +AT + +A + +NS + + SSSA+LEE + +A+ + Sbjct: 170 PNATQVDWFLKATNYY-----YIAASRMNSAISEAYTSVSSSAILEE---SAIQIASRWL 221
Query: 354 SAEQQQSKHGTSSADHNSTFATNVRAILA 440 S++ QQS A STF+ ILA Sbjct: 222 SSQPQQSSSAAEEA-AASTFSRKAENILA 249
>tr|Q5QLW4|Q5QLW4_ORYSJ Putative uncharacterized protein B1168H06.35 (Putative uncharacterized protein B1003B09.41) OS=Oryza sativa subsp. japonica GN=B1168H06.35 PE=4 SV=1 Length = 138
Score = 32.3 bits (72), Expect(2) = 1.5 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = -1
Query: 429 PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAALHRESPPEPRRK 292 PS W DPPR + CS +PPPA RE P RR+ Sbjct: 62 PSPPWSCCRLDPPRHHRP-----PPCSPRPPPARYGREGPGARRRR 102
Score = 23.1 bits (48), Expect(2) = 1.5 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = -3
Query: 532 SRPSWRPSLLMAAFRALPNCIKQKAT-PSP 446 SR RP +AA R P C++ A P P Sbjct: 11 SRREGRPGAAVAAARPRPTCVRAAAARPRP 40
>tr|B6PNZ3|B6PNZ3_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_132304 PE=4 SV=1 Length = 1706
Score = 35.4 bits (80), Expect = 2.1 Identities = 33/100 (33%), Positives = 39/100 (39%) Frame = -1
Query: 498 PPFGHCPTALSRRPPRHQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAALHR 319 PP H P+ RR P R S + S PP+ RR S P P+ Sbjct: 505 PPRRHSPSPQRRRSPSPPPRRRQQSPPPKRRSPSPPQKRRSVSPPQRRRSP-PQPSRRRS 563
Query: 318 ESPPEPRRKILFRLFCRKRNSPRPWRAAWPAGRNSQ*LPP 199 SPP RRK L + R SP P A P R + PP Sbjct: 564 PSPPVQRRKSLSPPQWKGRGSPPPRGRASPPPRLRESPPP 603
>tr|B6LTC8|B6LTC8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_120702 PE=4 SV=1 Length = 1736
Score = 35.4 bits (80), Expect = 2.1 Identities = 33/100 (33%), Positives = 39/100 (39%) Frame = -1
Query: 498 PPFGHCPTALSRRPPRHQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAALHR 319 PP H P+ RR P R S + S PP+ RR S P P+ Sbjct: 505 PPRRHSPSPQRRRSPSPPPRRRQQSPPPKRRSPSPPQKRRSVSPPQRRRSP-PQPSRRRS 563
Query: 318 ESPPEPRRKILFRLFCRKRNSPRPWRAAWPAGRNSQ*LPP 199 SPP RRK L + R SP P A P R + PP Sbjct: 564 PSPPVQRRKSLSPPQWKGRGSPPPRGRASPPPRLRESPPP 603
>tr|B0W4G6|B0W4G6_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ001735 PE=4 SV=1 Length = 1449
Score = 34.3 bits (77), Expect = 4.6 Identities = 35/156 (22%), Positives = 59/156 (37%) Frame = +3
Query: 42 PGRIMSGRSNYTAFPYGAGIKSRWPDHGXXXXXXXXEDLFSFPPPHSTEASWVAEATENF 221 PG+ SG + P A + S WP+ P P +TE + EA Sbjct: 918 PGKESSGGDGESVLPDSASLGSGWPNSMDQTRNSNVFSSTECPSPIATEG--IVEAQGPM 975
Query: 222 GRPATQLAKAEVNSVFCKIVGTESSSAVLEEIPGVGLLVAAVYYSAEQQQSKHGTSSADH 401 P T ++ SV T S+S V VA ++ + + T+ Sbjct: 976 SVPNTHGFNVQIQSV----PTTSSTSGVASVETPSSSSVAGSKSQSKGRNAGPSTAGGPD 1031
Query: 402 NSTFATNVRAILALLGDGVAFCLMQLGSARKAAISK 509 +S+F+ + + L+ + G + + SA K IS+ Sbjct: 1032 SSSFSKEINSGLSSIKKGFGNFMTSIDSALKTNISE 1067
>tr|Q8H5A6|Q8H5A6_ORYSJ Putative uncharacterized protein OJ1634_B10.109 OS=Oryza sativa subsp. japonica GN=OJ1634_B10.109 PE=4 SV=1 Length = 212
Score = 34.3 bits (77), Expect = 4.7 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1
Query: 366 AVRRCSTQPPPAALHRESPPEPRRKILFRLFCR 268 A RR S PP A H SPPE +R + FC+ Sbjct: 165 ACRRRSLSPPAARFHHPSPPEGKRGVELHRFCK 197
>tr|Q84T11|Q84T11_ORYSJ Putative uncharacterized protein OSJNBa0087C10.19 OS=Oryza sativa subsp. japonica GN=OSJNBa0087C10.19 PE=4 SV=1 Length = 388
Score = 34.3 bits (77), Expect = 4.7 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = -1
Query: 504 LWPPFGHCPTALSRRPPRHQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAAL 325 L P PT+ + P H EL+ P PP +H + + PPP L Sbjct: 153 LTPGHDRAPTSAAPPSPAHAPELKKPP--------PPPEAHH---RPTKSYTGHPPPPPL 201
Query: 324 HRESPPEPRR 295 +++PP+P R Sbjct: 202 EKDAPPQPPR 211
>tr|Q10BX5|Q10BX5_ORYSJ Os03g0801900 protein OS=Oryza sativa subsp. japonica GN=Os03g0801900 PE=2 SV=1 Length = 357
Score = 34.3 bits (77), Expect = 4.7 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = -1
Query: 504 LWPPFGHCPTALSRRPPRHQGELR*PSHWWQMWSCDPPRTYHVYFAAVRRCSTQPPPAAL 325 L P PT+ + P H EL+ P PP +H + + PPP L Sbjct: 153 LTPGHDRAPTSAAPPSPAHAPELKKPP--------PPPEAHH---RPTKSYTGHPPPPPL 201
Query: 324 HRESPPEPRR 295 +++PP+P R Sbjct: 202 EKDAPPQPPR 211
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