DK956821
Clone id TST39A01NGRL0026_L23
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_L23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAAGATTGCCATAAAGGATAACTATGTCCGTGCAAATAGGTTCAAGTGTGAACTGAATTC
AGAACAGGTTGGTAGATTGATAAAGCTCTTCAGGCCCCTGGACTCCAGAGGTTTGCCAGA
GCCAAAGCCTTCTAAGGAGGCAAAGAAAGATTTCACTCCAAAAGGCAAGTTGCCACGGGG
GCCGCCACCTCGGTCTCTGCGCAACAGGGGGCCTCCACCTCGTTTTTCAGGTCCTGCTCC
TCCCAGAGAACGAGTCTACAAGGACTATGCGCCGCAGTACTCTAGGGAGCGCCATGCTTC
AGAAATTATCCCCCCTAGCTATGCCCTTGTTCCAGATGTGGCCCATGCAGAAGCAGAGTT
ATTAAGGCAGAGGCACCTCAGACAAGTCCAAGAAGAGGCTCTTGACAGGAGGGCTTATCT
ACTCGATCCTGTGGTTGAAGCTTCAATTGCTCGTAAACGGTACTTGGAGGATGTTTATTT
GGCGGAACAGCAAGCCTTGGCTAAAAGGCCTCTTTTACCTGAAGTTTACAGAGATTTGGA
GTACCAAAGAGAGGCCCCATATCGGGGATATGCAGATGGTTTGCATGCACTCCCTTCCGC
AGCTTTGCCTTATGATCCGCGGGGCTA
■■Homology search results ■■ -
sp_hit_id P71485
Definition sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A OS=Mycobacterium avium
Align length 79
Score (bit) 34.7
E-value 0.41
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956821|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_L23, 5'
(627 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A OS=Mycobac... 35 0.41
sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN... 35 0.41
sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN... 34 0.70
sp|O24496|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasm... 31 4.5
sp|A0LV02|CNPD_ACIC1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 4.5
sp|P16846|UL23_HCMVA Tegument protein UL23 OS=Human cytomegalovi... 31 5.9
sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapie... 30 7.7
sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus... 30 7.7

>sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A
OS=Mycobacterium avium GN=embA PE=3 SV=1
Length = 1108

Score = 34.7 bits (78), Expect = 0.41
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Frame = -3

Query: 280 VLRRIVLVDSFSGRSRT*KT--RWRPPVAQRPRWRPPWQLAFWSEIFL-------CLLRR 128
VL IV + RSR T WR P+A R+RP LA W + L +L
Sbjct: 213 VLTAIVALAVLDRRSRGGGTLINWRSPIAWLSRYRPGTHLANWRRVGLATWIADAAVLAT 272

Query: 127 LWLWQTSGVQGPEELYQST 71
L LW G ++ Y T
Sbjct: 273 LLLWHVVGATSSDDGYNLT 291


>sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus
GN=Cgnl1 PE=1 SV=2
Length = 1298

Score = 34.7 bits (78), Expect = 0.41
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2

Query: 452 RKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQREA 556
++ L+D AE++AL KR LL + +DLEY+ EA
Sbjct: 1014 KEEELQDYQRAEEEALTKRQLLEQSLKDLEYELEA 1048


>sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens
GN=CGNL1 PE=1 SV=1
Length = 1302

Score = 33.9 bits (76), Expect = 0.70
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2

Query: 368 QRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQALAKRPLLPEVYRDLEYQ 547
QR L++ EA R + E + + L D A+ +AL KR LL + +DLEY+
Sbjct: 990 QRQLKEKTLEAEKSRLTAMKMQDEMRLMEEE-LRDYQRAQDEALTKRQLLEQTLKDLEYE 1048

Query: 548 REA 556
EA
Sbjct: 1049 LEA 1051


>sp|O24496|GLO2C_ARATH Hydroxyacylglutathione hydrolase cytoplasmic
OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2
Length = 258

Score = 31.2 bits (69), Expect = 4.5
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2

Query: 539 PNLCKLQVKEAF*PRLAVPPNKHPPSTVYEQLKLQPQDRVDKPSCQEPL 393
PN K+Q K A+ + PST+ E+L+ P RVDKP QE L
Sbjct: 189 PNNGKIQQKLAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKL 237


>sp|A0LV02|CNPD_ACIC1 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
GN=Acel_1490 PE=3 SV=1
Length = 491

Score = 31.2 bits (69), Expect = 4.5
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2

Query: 296 ASEIIPPSYALVPDVAHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDV 475
A + PS PD A AEAE+ R + +E+ L R LD E AR+R L ++
Sbjct: 34 AGNVRQPSGMSGPDAAAAEAEIREARSELERREQRLAEREARLDAEHERLAARERQLAEL 93


>sp|P16846|UL23_HCMVA Tegument protein UL23 OS=Human cytomegalovirus
(strain AD169) GN=UL23 PE=3 SV=2
Length = 284

Score = 30.8 bits (68), Expect = 5.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3

Query: 220 RWRPPVAQRPRWRPPWQLAF-WSEIFLCLLRRLW 122
RWRPP RP W+P ++A W + ++RR W
Sbjct: 14 RWRPPKTSRP-WKPGQRVALVWPKDRCLVIRRRW 46


>sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapiens
GN=SWAP70 PE=1 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 7.7
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2

Query: 341 AHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQAL 499
A EL R++ +RQ EE + +++ L+ ++ R R LED+YL Q+AL
Sbjct: 385 ARFSTELEREKLIRQQMEEQVAQKSSELEQYLQ----RVRELEDMYLKLQEAL 433


>sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus
GN=SWAP70 PE=1 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 7.7
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2

Query: 341 AHAEAELLRQRHLRQVQEEALDRRAYLLDPVVEASIARKRYLEDVYLAEQQAL 499
A EL R++ +RQ EE + +++ L+ ++ R R LED+YL Q+AL
Sbjct: 385 ARFSTELEREKLIRQQMEEQVAQKSSELEQYLQ----RVRELEDMYLKLQEAL 433


tr_hit_id B8LQS0
Definition tr|B8LQS0|B8LQS0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 51
Score (bit) 48.5
E-value 0.0003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956821|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_L23, 5'
(627 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LQS0|B8LQS0_PICSI Putative uncharacterized protein OS=Picea... 49 3e-04
tr|A7QX14|A7QX14_VITVI Chromosome chr14 scaffold_211, whole geno... 49 3e-04
tr|A7NYZ0|A7NYZ0_VITVI Chromosome chr6 scaffold_3, whole genome ... 44 0.010
tr|A5CAT2|A5CAT2_VITVI Putative uncharacterized protein OS=Vitis... 44 0.010
tr|B6UA70|B6UA70_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.018
tr|B8LNW7|B8LNW7_PICSI Putative uncharacterized protein OS=Picea... 42 0.039
tr|A9NVJ6|A9NVJ6_PICSI Putative uncharacterized protein OS=Picea... 42 0.039
tr|Q67WK6|Q67WK6_ORYSJ Os06g0227200 protein OS=Oryza sativa subs... 41 0.067
tr|B8B489|B8B489_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.067
tr|A3B9V7|A3B9V7_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.067
tr|B6SV62|B6SV62_MAIZE Rho GTPase activator OS=Zea mays PE=2 SV=1 37 0.74
tr|B8Q897|B8Q897_ORYSI SKIP interacting protein 11 (Fragment) OS... 37 0.96
tr|B8B5I6|B8B5I6_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.96
tr|Q84W28|Q84W28_ARATH Putative uncharacterized protein At2g3291... 37 1.3
tr|Q69RJ1|Q69RJ1_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.3
tr|Q5QLP4|Q5QLP4_ORYSJ Pleckstrin homology (PH) domain-containin... 37 1.3
tr|Q0D3Z0|Q0D3Z0_ORYSJ Os07g0658300 protein OS=Oryza sativa subs... 37 1.3
tr|O48774|O48774_ARATH Putative uncharacterized protein At2g3291... 37 1.3
tr|A3BN12|A3BN12_ORYSJ Putative uncharacterized protein OS=Oryza... 37 1.3
tr|B0DEY5|B0DEY5_LACBS Predicted protein OS=Laccaria bicolor (st... 37 1.3
tr|A8U9P8|A8U9P8_9LACT Hydrolase, haloacid dehalogenase-like fam... 36 1.6
tr|B6T8I6|B6T8I6_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.6
tr|B6KNK1|B6KNK1_TOXGO Putative uncharacterized protein OS=Toxop... 35 3.7
tr|B2RY19|B2RY19_MOUSE Cgnl1 protein OS=Mus musculus GN=Cgnl1 PE... 35 4.8
tr|B2RSU6|B2RSU6_MOUSE Cingulin-like 1 OS=Mus musculus GN=Cgnl1 ... 35 4.8
tr|A0Q9D0|A0Q9D0_MYCA1 Probable arabinosyltransferase C OS=Mycob... 35 4.8
tr|Q6ZGT6|Q6ZGT6_ORYSJ Os02g0745600 protein OS=Oryza sativa subs... 35 4.8
tr|A2X9K7|A2X9K7_ORYSI Putative uncharacterized protein OS=Oryza... 35 4.8
tr|B0DHU1|B0DHU1_LACBS Predicted protein OS=Laccaria bicolor (st... 34 8.1
tr|A3LWR0|A3LWR0_PICST Predicted protein OS=Pichia stipitis GN=P... 34 8.1

>tr|B8LQS0|B8LQS0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 394

Score = 48.5 bits (114), Expect = 3e-04
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPL---DSRGLPEPKPSKEAK 145
K+AIKDNY +FK ELN+EQV L++LF+P+ +SRG + +P + ++
Sbjct: 208 KVAIKDNYYGKKKFKFELNAEQVKNLVQLFKPVPAQNSRGPRDSRPGRPSR 258


>tr|A7QX14|A7QX14_VITVI Chromosome chr14 scaffold_211, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00008906001
PE=4 SV=1
Length = 602

Score = 48.5 bits (114), Expect = 3e-04
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRP--LDSRGLPEPKPSKEAKKD 151
K AIKDNY + N+FK EL EQV +L+KLFRP + S+ LP P + ++
Sbjct: 225 KKAIKDNYDKTNKFKTELTMEQVKKLMKLFRPTEIHSKALPIHSPPRARARE 276


>tr|A7NYZ0|A7NYZ0_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024305001
PE=4 SV=1
Length = 386

Score = 43.5 bits (101), Expect = 0.010
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKPS 133
K IKDNY + N+F CELNS+QV L KLF+ S+G P+ K S
Sbjct: 92 KKVIKDNYYKKNKFNCELNSDQVKNLCKLFQAA-SKG-PKSKDS 133


>tr|A5CAT2|A5CAT2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_005395 PE=4 SV=1
Length = 669

Score = 43.5 bits (101), Expect = 0.010
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKPS 133
K IKDNY + N+F CELNS+QV L KLF+ S+G P+ K S
Sbjct: 375 KKVIKDNYYKKNKFNCELNSDQVKNLCKLFQAA-SKG-PKSKDS 416


>tr|B6UA70|B6UA70_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 507

Score = 42.7 bits (99), Expect = 0.018
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKP 130
K AIK+NY RF ELNS+QV RL+ +F+P+D LP+ P
Sbjct: 271 KHAIKENYSSKGRFTQELNSKQVQRLLAMFKPID---LPQSAP 310


>tr|B8LNW7|B8LNW7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 461

Score = 41.6 bits (96), Expect = 0.039
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPL---DSR 109
K AIKDNY N+F+ ELN++QV +L +LFRP+ DSR
Sbjct: 172 KKAIKDNYDGKNKFRFELNAQQVKKLSELFRPVPRFDSR 210


>tr|A9NVJ6|A9NVJ6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 458

Score = 41.6 bits (96), Expect = 0.039
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPL---DSR 109
K AIKDNY N+F+ ELN++QV +L +LFRP+ DSR
Sbjct: 169 KKAIKDNYDGKNKFRFELNAQQVKKLSELFRPVPRFDSR 207


>tr|Q67WK6|Q67WK6_ORYSJ Os06g0227200 protein OS=Oryza sativa subsp.
japonica GN=P0425F05.13 PE=2 SV=1
Length = 704

Score = 40.8 bits (94), Expect = 0.067
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKPSK 136
K AI++NY ++F ELNS QV RLI LF +S +P+P P K
Sbjct: 342 KDAIRENYSAKSKFNPELNSRQVHRLIALF---ESVSVPQPAPQK 383


>tr|B8B489|B8B489_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22240 PE=4 SV=1
Length = 704

Score = 40.8 bits (94), Expect = 0.067
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKPSK 136
K AI++NY ++F ELNS QV RLI LF +S +P+P P K
Sbjct: 342 KDAIRENYSAKSKFNPELNSRQVHRLIALF---ESVSVPQPAPQK 383


>tr|A3B9V7|A3B9V7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_019829 PE=4 SV=1
Length = 706

Score = 40.8 bits (94), Expect = 0.067
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +2

Query: 2 KIAIKDNYVRANRFKCELNSEQVGRLIKLFRPLDSRGLPEPKPSK 136
K AI++NY ++F ELNS QV RLI LF +S +P+P P K
Sbjct: 342 KDAIRENYSAKSKFNPELNSRQVHRLIALF---ESVSVPQPAPQK 383