DK956828 |
Clone id |
TST39A01NGRL0026_M06 |
Library |
TST39 |
Length |
573 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_M06. 5' end sequence. |
Accession |
DK956828 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1975Contig1 |
Sequence |
GACAGCGTGGGAGTGCATCTACGGCGATGGCACGCATTGAAGCTGCTAATTAGCTCGAGG TTTTGTCGGCAGAGCCAATCTTCGTATGGCTTCCACATCAATTGCTTCTGGAGTTCATAG CTTGGGTGCCCATTCGGCCCGTAGTGGCCAACATGACGGGCTGTGCTGCTTACGACGTGG TCTTCATCATGCGCAGTTTGCAGGAGGCTTTCTGCAGCAGCATTACAGTTGCTGCACTAA CCTTCAATTGGGGGGCAAGAAGTCCACGCTGCTGAATGCCATTTCTAATGGAGATCAACC GTCTAATGACGACGACGACGAGGGTAATAACCCCCCATCTGCTGATGGCTTCTTTCAGGC AAATCAAGACTCGTTTCGAAAAAACTTAGAGAACATTATTGGTGCTGATGATGGGAGCTT TTGTGGGAAAGATCTCGCAATGTTAATAAGGAACAAATATGGTAGATCTTATGATGTGCA GCTTATCAAGAAGGAGTTTATGGGAAGACAACTACTGGCGATGAATGTAATGTGGAAATA TAGAGAACAGCGTTCATTTCCACTTACAGAAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q17QC0 |
Definition |
sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus |
Align length |
46 |
Score (bit) |
35.4 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX74 |
Definition |
tr|A9NX74|A9NX74_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
122 |
Score (bit) |
132.0 |
E-value |
1.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956828|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_M06, 5' (573 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NX74|A9NX74_PICSI Putative uncharacterized protein OS=Picea... 132 1e-29 tr|A7PNE8|A7PNE8_VITVI Chromosome chr1 scaffold_22, whole genome... 116 8e-25 tr|Q9LT18|Q9LT18_ARATH Dbj|BAA18864.1 OS=Arabidopsis thaliana PE... 112 1e-23 tr|Q8LDI1|Q8LDI1_ARATH Putative uncharacterized protein (Putativ... 112 1e-23 tr|A9T0A8|A9T0A8_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 1e-21 tr|B6UDQ4|B6UDQ4_MAIZE Putative uncharacterized protein OS=Zea m... 104 3e-21 tr|A2WJR6|A2WJR6_ORYSI Putative uncharacterized protein OS=Oryza... 103 9e-21 tr|Q6K9T4|Q6K9T4_ORYSJ Putative uncharacterized protein OJ1124_D... 102 1e-20 tr|A3ACZ5|A3ACZ5_ORYSJ Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|B4FUD0|B4FUD0_MAIZE Putative uncharacterized protein OS=Zea m... 101 3e-20 tr|A9RV24|A9RV24_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 1e-19 tr|A8JCY0|A8JCY0_CHLRE Predicted protein OS=Chlamydomonas reinha... 55 2e-06 tr|B4B6T9|B4B6T9_9CHRO Putative uncharacterized protein OS=Cyano... 52 2e-05 tr|Q4C1G2|Q4C1G2_CROWT Putative uncharacterized protein OS=Croco... 52 2e-05 tr|B1WPT3|B1WPT3_CYAA5 Putative uncharacterized protein OS=Cyano... 50 1e-04 tr|B4W167|B4W167_9CYAN Putative uncharacterized protein OS=Micro... 48 3e-04 tr|B0JIN3|B0JIN3_MICAN Putative uncharacterized protein OS=Micro... 47 6e-04 tr|B0CFY1|B0CFY1_ACAM1 Putative uncharacterized protein OS=Acary... 47 6e-04 tr|B7KC98|B7KC98_9CHRO Putative uncharacterized protein OS=Cyano... 47 6e-04 tr|A8YFW7|A8YFW7_MICAE Similar to tr|A3IK48|A3IK48_9CHRO Hypothe... 47 6e-04 tr|A3IK48|A3IK48_9CHRO Putative uncharacterized protein OS=Cyano... 47 6e-04 tr|Q2JUP2|Q2JUP2_SYNJA Putative uncharacterized protein OS=Synec... 47 8e-04 tr|Q2JL38|Q2JL38_SYNJB Putative uncharacterized protein OS=Synec... 47 8e-04 tr|A0YWK4|A0YWK4_9CYAN Putative uncharacterized protein OS=Lyngb... 47 8e-04 tr|B8HNR2|B8HNR2_9CHRO Putative uncharacterized protein OS=Cyano... 47 0.001 tr|Q114L5|Q114L5_TRIEI Putative uncharacterized protein OS=Trich... 46 0.002 tr|B7JV81|B7JV81_SYNP8 Putative uncharacterized protein OS=Synec... 46 0.002 tr|B4C5R5|B4C5R5_9CHRO Putative uncharacterized protein OS=Cyano... 46 0.002 tr|A0ZJ60|A0ZJ60_NODSP Putative uncharacterized protein OS=Nodul... 45 0.002 tr|A9S4V4|A9S4V4_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002
>tr|A9NX74|A9NX74_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 224
Score = 132 bits (332), Expect = 1e-29 Identities = 69/122 (56%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Frame = +2
Query: 209 FLQQHYSCCTNLQLGGKKSTLLNAISNGDQPSNDDDDEGNNPPSAD-GFFQANQDSFRKN 385 F Q+++ C NL+ K+ ++ A + G++ N+DD+E ++ S D N++ FRK+ Sbjct: 45 FPQRNFFGCINLRQSKMKAIVVRA-TLGEKEPNEDDNEDHDQVSGDKNSNNMNENKFRKD 103
Query: 386 LENIIGADDGSFCGKDLAMLIRNKYGRSYDVQLIKKEFMGRQLLAMNVMWKYREQRSFPL 565 LE I+G DD +F G +LA LIRNKYGRSYDV LIKKEFMGR LLAMNVMWKYREQRSFPL Sbjct: 104 LERIVGKDDSAFSGIELASLIRNKYGRSYDVTLIKKEFMGRNLLAMNVMWKYREQRSFPL 163
Query: 566 TE 571 TE Sbjct: 164 TE 165
>tr|A7PNE8|A7PNE8_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021220001 PE=4 SV=1 Length = 152
Score = 116 bits (291), Expect = 8e-25 Identities = 57/91 (62%), Positives = 65/91 (71%) Frame = +2
Query: 299 PSNDDDDEGNNPPSADGFFQANQDSFRKNLENIIGADDGSFCGKDLAMLIRNKYGRSYDV 478 P + +D PS N + R+NLE I+G+DD +F G DLA LIRNKYGRSYDV Sbjct: 3 PDDSEDGIDKKQPSNGELGGVNSEMIRENLERIVGSDDSTFSGLDLATLIRNKYGRSYDV 62
Query: 479 QLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 LIKKEFMGR LLA+NVMWKY EQRSFPLTE Sbjct: 63 LLIKKEFMGRNLLALNVMWKYMEQRSFPLTE 93
>tr|Q9LT18|Q9LT18_ARATH Dbj|BAA18864.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 232
Score = 112 bits (281), Expect = 1e-23 Identities = 66/126 (52%), Positives = 79/126 (62%), Gaps = 4/126 (3%) Frame = +2
Query: 206 GFLQQHYSCCTNLQLGG----KKSTLLNAISNGDQPSNDDDDEGNNPPSADGFFQANQDS 373 G L +S C G K S + + + + N DD+E + QAN D Sbjct: 50 GRLAFSHSLCLKTTYGKTDRRKFSRICSIVDDEGNLDNSDDEEKESLDDKTKR-QAN-DM 107
Query: 374 FRKNLENIIGADDGSFCGKDLAMLIRNKYGRSYDVQLIKKEFMGRQLLAMNVMWKYREQR 553 R NLE ++G+DD +F G DLA LIR KYG+SYDVQLIKKEFMG+ LLAMNVMWKYREQR Sbjct: 108 NRANLERMVGSDDSAFNGLDLATLIRQKYGKSYDVQLIKKEFMGKNLLAMNVMWKYREQR 167
Query: 554 SFPLTE 571 SFPLTE Sbjct: 168 SFPLTE 173
>tr|Q8LDI1|Q8LDI1_ARATH Putative uncharacterized protein (Putative uncharacterized protein At3g19900) OS=Arabidopsis thaliana GN=At3g19900 PE=2 SV=1 Length = 222
Score = 112 bits (281), Expect = 1e-23 Identities = 66/126 (52%), Positives = 79/126 (62%), Gaps = 4/126 (3%) Frame = +2
Query: 206 GFLQQHYSCCTNLQLGG----KKSTLLNAISNGDQPSNDDDDEGNNPPSADGFFQANQDS 373 G L +S C G K S + + + + N DD+E + QAN D Sbjct: 40 GRLAFSHSLCLKTTYGKTDRRKFSRICSIVDDEGNLDNSDDEEKESLDDKTKR-QAN-DM 97
Query: 374 FRKNLENIIGADDGSFCGKDLAMLIRNKYGRSYDVQLIKKEFMGRQLLAMNVMWKYREQR 553 R NLE ++G+DD +F G DLA LIR KYG+SYDVQLIKKEFMG+ LLAMNVMWKYREQR Sbjct: 98 NRANLERMVGSDDSAFNGLDLATLIRQKYGKSYDVQLIKKEFMGKNLLAMNVMWKYREQR 157
Query: 554 SFPLTE 571 SFPLTE Sbjct: 158 SFPLTE 163
>tr|A9T0A8|A9T0A8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138352 PE=4 SV=1 Length = 131
Score = 105 bits (263), Expect = 1e-21 Identities = 53/72 (73%), Positives = 59/72 (81%), Gaps = 2/72 (2%) Frame = +2
Query: 362 NQDSFRKNLENIIGAD--DGSFCGKDLAMLIRNKYGRSYDVQLIKKEFMGRQLLAMNVMW 535 + D+FR+ +E ++ D D SF G DLA LIR KYGRSYDVQ IKKEFMGRQLLAMNVMW Sbjct: 1 SSDAFRQQMERMVNRDNADVSFRGIDLATLIRKKYGRSYDVQFIKKEFMGRQLLAMNVMW 60
Query: 536 KYREQRSFPLTE 571 KYREQRSFPLTE Sbjct: 61 KYREQRSFPLTE 72
>tr|B6UDQ4|B6UDQ4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 224
Score = 104 bits (260), Expect = 3e-21 Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 4/94 (4%) Frame = +2
Query: 302 SNDDD---DEGNNPPSADGFFQANQDSFRKNLENIIGADDGS-FCGKDLAMLIRNKYGRS 469 S+DD+ D G + S+ G R++LE ++G+DD + F G DLA LIR KYGRS Sbjct: 72 SDDDECASDGGESESSSSGGKDDGGGLSREDLERLVGSDDDAKFNGLDLANLIRKKYGRS 131
Query: 470 YDVQLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 YDV LIKKEFMGR LLAMNVMWKYREQRSFPL+E Sbjct: 132 YDVTLIKKEFMGRNLLAMNVMWKYREQRSFPLSE 165
>tr|A2WJR6|A2WJR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00064 PE=4 SV=1 Length = 302
Score = 103 bits (256), Expect = 9e-21 Identities = 55/95 (57%), Positives = 64/95 (67%), Gaps = 1/95 (1%) Frame = +2
Query: 290 GDQPSNDDDDEGNNPPSADGFFQANQDSFRKNLENIIGA-DDGSFCGKDLAMLIRNKYGR 466 G+ S DD+E + R+ LE ++G +D +F G DLA LIR+KYGR Sbjct: 160 GESTSGKDDEE-------------EEKRRREELERLVGGPEDATFSGADLAALIRSKYGR 206
Query: 467 SYDVQLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 SYDV LIKKEFMGR LLAMNVMWKYREQRSFPLTE Sbjct: 207 SYDVTLIKKEFMGRNLLAMNVMWKYREQRSFPLTE 241
>tr|Q6K9T4|Q6K9T4_ORYSJ Putative uncharacterized protein OJ1124_D06.15 OS=Oryza sativa subsp. japonica GN=OJ1124_D06.15 PE=4 SV=1 Length = 306
Score = 102 bits (255), Expect = 1e-20 Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 1/102 (0%) Frame = +2
Query: 269 LLNAISNGDQPSNDDDDEGNNPPSADGFFQANQDSFRKNLENIIGA-DDGSFCGKDLAML 445 ++ A+ +G S DE + + R+ LE ++G +D +F G DLA L Sbjct: 155 VIRAVGDGAGESTSGKDE-----------EEEEKRRREELERLVGGPEDATFSGADLAAL 203
Query: 446 IRNKYGRSYDVQLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 IR+KYGRSYDV LIKKEFMGR LLAMNVMWKYREQRSFPLTE Sbjct: 204 IRSKYGRSYDVTLIKKEFMGRNLLAMNVMWKYREQRSFPLTE 245
>tr|A3ACZ5|A3ACZ5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008667 PE=4 SV=1 Length = 315
Score = 102 bits (255), Expect = 1e-20 Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 1/102 (0%) Frame = +2
Query: 269 LLNAISNGDQPSNDDDDEGNNPPSADGFFQANQDSFRKNLENIIGA-DDGSFCGKDLAML 445 ++ A+ +G S DE + + R+ LE ++G +D +F G DLA L Sbjct: 164 VIRAVGDGAGESTSGKDE-----------EEEEKRRREELERLVGGPEDATFSGADLAAL 212
Query: 446 IRNKYGRSYDVQLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 IR+KYGRSYDV LIKKEFMGR LLAMNVMWKYREQRSFPLTE Sbjct: 213 IRSKYGRSYDVTLIKKEFMGRNLLAMNVMWKYREQRSFPLTE 254
>tr|B4FUD0|B4FUD0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 225
Score = 101 bits (251), Expect = 3e-20 Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 7/97 (7%) Frame = +2
Query: 302 SNDDDDE------GNNPPSADGFFQANQDSFRKNLENIIGAD-DGSFCGKDLAMLIRNKY 460 + DDDE + S+ G R++LE ++G+D D F G DLA LIR KY Sbjct: 70 AGSDDDECASAGGESESSSSGGKDDGGGGLSREDLERLVGSDEDAKFNGLDLANLIRKKY 129
Query: 461 GRSYDVQLIKKEFMGRQLLAMNVMWKYREQRSFPLTE 571 GRSYDV LIKKEFMGR LLAMNVMWKYREQRSFPL+E Sbjct: 130 GRSYDVTLIKKEFMGRNLLAMNVMWKYREQRSFPLSE 166
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