DK956834 |
Clone id |
TST39A01NGRL0026_M12 |
Library |
TST39 |
Length |
646 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_M12. 5' end sequence. |
Accession |
DK956834 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCCATCAGCACCAGCAAACCATAACAGAAAATCTGAATCCTTTAGCACTTTTATCCCTC TGCGGAGCGTGGGATTCAAAAAAACGCTTGTGGTTCGTGTCTTCCATTTCGAGTTCGTCT CTGTGCAGGGAAACCCTAACGCTCTCATCAAGCTCGCCATCTCTCAGAAACATCGCATTT TTGTTGGGCTAGGCTCCTGCATTCTCTGTTTCACGCTGGGGTTCCTATGGAGTTCGAGAG CCTCTGTAGTGGCGGCCAGACCATGACCCCACCAAACTTTGCATTCGCTTTCAATGATAG CAACTTCTCAGATCGGGTTTTGCGCATTGAAGTAATGGCTGGCTCAGCCATGATGAAGGC AGAGGATGGGACTACTAGTATTGCTGATTGGGCCAGAAACCGGAAACGACGACGTGCGGA TGCAAAGAAGGATGCAGCCGTGGAGACTGATTTAGACTACTTAGAGGCTCAGGGGGAGCA CATTATGGGTGCTTCTCAGCAGGAAGCAGAGGAAGTTGGGCCATTCGATGCCTTGGATGA TGAACCGGTAGCGATGGACGAGTCAGCCCCCCCAATCTCAAGTCCAGCAGGTGACGATCA GTCTTCCTCAGATTGTGCACTTGTTGTGAGGGTCAAAACCTTGCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5G265 |
Definition |
sp|Q5G265|NETR_SAGLB Neurotrypsin OS=Saguinus labiatus |
Align length |
57 |
Score (bit) |
35.0 |
E-value |
0.31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUY5 |
Definition |
tr|A9NUY5|A9NUY5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
122 |
Score (bit) |
55.5 |
E-value |
3.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956834|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_M12, 5' (626 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUY5|A9NUY5_PICSI Putative uncharacterized protein OS=Picea... 55 3e-06 tr|A7PA09|A7PA09_VITVI Chromosome chr14 scaffold_9, whole genome... 47 0.001 tr|A5BGD0|A5BGD0_VITVI Putative uncharacterized protein OS=Vitis... 43 0.013 tr|O82343|O82343_ARATH Expressed protein (Putative uncharacteriz... 41 0.067 tr|A9S1Y2|A9S1Y2_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.067 tr|Q8LG00|Q8LG00_ARATH Putative uncharacterized protein OS=Arabi... 40 0.11 tr|Q5Z9M6|Q5Z9M6_ORYSJ cDNA clone:J013066L01, full insert sequen... 40 0.15 tr|Q0DBY3|Q0DBY3_ORYSJ Os06g0507400 protein (Fragment) OS=Oryza ... 40 0.15 tr|B8B331|B8B331_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.15 tr|A7PZQ8|A7PZQ8_VITVI Chromosome chr15 scaffold_40, whole genom... 39 0.19 tr|Q6J6M8|Q6J6M8_HORVD GAMYB-binding protein OS=Hordeum vulgare ... 39 0.25 tr|A3BC61|A3BC61_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.25 tr|A8PG44|A8PG44_COPC7 Putative uncharacterized protein OS=Copri... 39 0.33 tr|A7QNE0|A7QNE0_VITVI Chromosome chr2 scaffold_132, whole genom... 38 0.56 tr|B7ZYR2|B7ZYR2_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.74 tr|B4FHV1|B4FHV1_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.3 tr|B6T8V9|B6T8V9_MAIZE GAMYB-binding protein OS=Zea mays PE=2 SV=1 36 1.6 tr|B7Z1T2|B7Z1T2_HUMAN cDNA FLJ52618 OS=Homo sapiens PE=2 SV=1 36 2.1 tr|A1L1H0|A1L1H0_XENLA LOC100036839 protein OS=Xenopus laevis GN... 35 3.7 tr|Q6K229|Q6K229_ORYSJ Os02g0260700 protein OS=Oryza sativa subs... 35 3.7 tr|B8AFA8|B8AFA8_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.7 tr|A3A595|A3A595_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.7 tr|B3NXB3|B3NXB3_DROER GG17728 OS=Drosophila erecta GN=GG17728 P... 35 3.7 tr|B5YMB1|B5YMB1_THAPS Predicted protein OS=Thalassiosira pseudo... 34 6.2 tr|Q0AAD9|Q0AAD9_ALHEH Putative uncharacterized protein OS=Alkal... 34 8.1
>tr|A9NUY5|A9NUY5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 572
Score = 55.5 bits (132), Expect = 3e-06 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 11/122 (9%) Frame = +3
Query: 294 RVLRIEVMAGSAMMKAE-DGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEHIMG 470 R+LRIE+M+G K++ +G SI ++ + +L+ EHIM Sbjct: 58 RILRIEIMSGPTESKSDGEGCNSIADWARNRKRRRED------IKKEAGFLDGCEEHIMI 111
Query: 471 ASQQEAEEVGPFDALDDEPVAMDESAPP----ISSPAGDD------QSSSDCALVVRVKT 620 +S + ++ ++ D+E VAM E +P +SSPA DD S DC+ +V+V+T Sbjct: 112 SSHPDTDDAAAYENPDEEAVAMIEESPTTVAMLSSPAADDCGHGSSSWSMDCSTIVKVRT 171
Query: 621 LH 626 +H Sbjct: 172 IH 173
>tr|A7PA09|A7PA09_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037927001 PE=4 SV=1 Length = 422
Score = 47.0 bits (110), Expect = 0.001 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Frame = +3
Query: 294 RVLRIEVMAGSAMMKAE-DGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEHIMG 470 R+LRIE+MAG+ ++E +G TSI E D + E I+ Sbjct: 44 RILRIEIMAGAQDSRSEGEGCTSIADWARHRKRRREDIKK----ENGADIVTCPEEQILN 99
Query: 471 ASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSSDCALVVRVKTLH 626 +Q + ++V + D E VAM E + +S + + DC+ VVR+KTLH Sbjct: 100 CNQPDVDDVVASENDDKEAVAMIEES---ASVGNNSAWNMDCSTVVRIKTLH 148
>tr|A5BGD0|A5BGD0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008241 PE=4 SV=1 Length = 526
Score = 43.1 bits (100), Expect = 0.013 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 4/115 (3%) Frame = +3
Query: 294 RVLRIEVMAGSAMMKAE-DGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEHIMG 470 R+LRIE++A K + +G SI V+ + E I+ Sbjct: 22 RLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKKENAVDVHHE------EQILN 75
Query: 471 ASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSS---DCALVVRVKTLH 626 + + E+ ++ D+E VAM E +PP AG SS DC+ V+RVKTLH Sbjct: 76 CNMPDTEDGVAYENQDEEAVAMIEESPP-GDEAGHSSDSSWGMDCSTVLRVKTLH 129
>tr|O82343|O82343_ARATH Expressed protein (Putative uncharacterized protein At2g46260) OS=Arabidopsis thaliana GN=At2g46260 PE=2 SV=2 Length = 561
Score = 40.8 bits (94), Expect = 0.067 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Frame = +3
Query: 294 RVLRIEVMAGSAMMKAE-DGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEHIMG 470 R+LRIE++ G + +++ +G TSI V A+ + + Sbjct: 43 RLLRIEILGGPSDSRSDAEGCTSIADWARHRKRRREDNKKDNGVAISDIVACAEEQILTD 102
Query: 471 ASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSS------DCALVVRVKTLH 626 +Q + ++ D LDDE AM E A +GDD +SS DC+ VVRVK LH Sbjct: 103 NNQPDMDDAPGGDNLDDEGEAMVEEAL-----SGDDDASSEPNWGIDCSTVVRVKELH 155
>tr|A9S1Y2|A9S1Y2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122867 PE=4 SV=1 Length = 542
Score = 40.8 bits (94), Expect = 0.067 Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 11/145 (7%) Frame = +3
Query: 225 CSGGQTMTXXXXXXXXXXXXXXXRVLRIEVMAGSAMMKAEDGTTSIXXXXXXXXXXXXXX 404 CS G T RVLRIEV+A S K + G+TS Sbjct: 6 CSSGGTSAPTTYTFAFNDSNFSDRVLRIEVVAASE--KNDAGSTSARQKKRRRADRNTEA 63
Query: 405 XXXXXVETDLDYLEAQGEHIMGASQQE-----AEEVGPFDALDDEPVAMDESAPPISSPA 569 L E +G Q+E AE+V P +A D+E VAM E +++ A Sbjct: 64 GLGVS-----KLLGGASETQLGEGQEEQVMYVAEDVAPQEA-DEEAVAMIEETYGVTNFA 117
Query: 570 GDDQSSS------DCALVVRVKTLH 626 G+D +S D A+V+R KT+H Sbjct: 118 GEDGGTSSGSWNMDTAVVLRSKTVH 142
>tr|Q8LG00|Q8LG00_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 546
Score = 40.0 bits (92), Expect = 0.11 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Frame = +3
Query: 294 RVLRIEVMAGSAMMKAE-DGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEHIMG 470 R+LRIE++ G + +++ +G TSI V A+ + + Sbjct: 28 RLLRIEILGGPSDSRSDAEGCTSIADWARHRKRRREDNKKDNGVAISDIVACAEEQILTD 87
Query: 471 ASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSS------DCALVVRVKTLH 626 +Q + ++ D LDDE AM E A GDD +SS DC+ VVRVK LH Sbjct: 88 NNQPDMDDAPGGDNLDDEGEAMVEEALX-----GDDDASSEPNWGIDCSTVVRVKELH 140
>tr|Q5Z9M6|Q5Z9M6_ORYSJ cDNA clone:J013066L01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0561B08.19 PE=2 SV=1 Length = 536
Score = 39.7 bits (91), Expect = 0.15 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%) Frame = +3
Query: 294 RVLRIEVMAGS----AMMKAEDGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEH 461 RVLRIE++AG A A +G +S+ +L + G++ Sbjct: 26 RVLRIEIVAGDDAAGAKGAAGEGCSSLADWAHQRKRR----------REELRREKESGKY 75
Query: 462 I-MGASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSSD------CALVVRVKT 620 + + EAEE ++ ++EPVAM E +PP G+D S D C V+RVK+ Sbjct: 76 TDLETCKVEAEECDTYEENNEEPVAMIEESPPDIGQDGEDGDSCDSSWSMECTQVLRVKS 135
Query: 621 LH 626 ++ Sbjct: 136 IY 137
>tr|Q0DBY3|Q0DBY3_ORYSJ Os06g0507400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0507400 PE=4 SV=1 Length = 623
Score = 39.7 bits (91), Expect = 0.15 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%) Frame = +3
Query: 294 RVLRIEVMAGS----AMMKAEDGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEH 461 RVLRIE++AG A A +G +S+ +L + G++ Sbjct: 113 RVLRIEIVAGDDAAGAKGAAGEGCSSLADWAHQRKRR----------REELRREKESGKY 162
Query: 462 I-MGASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSSD------CALVVRVKT 620 + + EAEE ++ ++EPVAM E +PP G+D S D C V+RVK+ Sbjct: 163 TDLETCKVEAEECDTYEENNEEPVAMIEESPPDIGQDGEDGDSCDSSWSMECTQVLRVKS 222
Query: 621 LH 626 ++ Sbjct: 223 IY 224
>tr|B8B331|B8B331_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23149 PE=4 SV=1 Length = 536
Score = 39.7 bits (91), Expect = 0.15 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%) Frame = +3
Query: 294 RVLRIEVMAGS----AMMKAEDGTTSIXXXXXXXXXXXXXXXXXXXVETDLDYLEAQGEH 461 RVLRIE++AG A A +G +S+ +L + G++ Sbjct: 26 RVLRIEIVAGDDAAGAKGAAGEGCSSLADWAHQRKRR----------REELRREKESGKY 75
Query: 462 I-MGASQQEAEEVGPFDALDDEPVAMDESAPPISSPAGDDQSSSD------CALVVRVKT 620 + + EAEE ++ ++EPVAM E +PP G+D S D C V+RVK+ Sbjct: 76 TDLETCKVEAEECDTYEENNEEPVAMIEESPPDIGQDGEDGDSCDSSWSMECTQVLRVKS 135
Query: 621 LH 626 ++ Sbjct: 136 IY 137
>tr|A7PZQ8|A7PZQ8_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026970001 PE=4 SV=1 Length = 503
Score = 39.3 bits (90), Expect = 0.19 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = +3
Query: 423 ETDLDYLEAQGEHIMGASQQEAEEVGPFDALDDEPVAM-DESAPPISSPAGDDQS-SSDC 596 E L + E I+ +Q + ++V + D+E VAM +ESA + G++ + + DC Sbjct: 34 ENGLYIVACPEEQILNCNQPDVDDVVACENEDEEAVAMIEESASGDEAEVGNNSAWNMDC 93
Query: 597 ALVVRVKTLH 626 + VVR+KTLH Sbjct: 94 STVVRIKTLH 103
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